Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 3.1e-154 548.5 297 100.0
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 1.1e-55 221.1 265 54.3
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 4.4e-55 219.2 148 79.1
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 9.1e-53 211.5 162 71.6
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 3.5e-52 209.5 190 61.6
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 1.7e-51 207.2 142 74.6
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 3.8e-51 206.1 140 77.1
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 6.5e-51 205.3 295 48.1
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 1.4e-50 204.1 142 73.9
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 1.4e-50 204.1 142 73.9
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 4.2e-50 202.6 178 64.6
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 5.5e-50 202.2 222 58.6
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 1.0e-48 198.0 224 56.7
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 1.5e-47 194.1 309 46.9
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 5.7e-47 192.2 228 53.9
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 7.4e-47 191.8 291 50.5
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 9.7e-47 191.4 318 46.2
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 1.3e-46 191.0 291 50.5
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 1.3e-46 191.0 143 71.3
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 1.3e-46 191.0 235 52.8
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 2.8e-46 189.9 167 62.9
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 4.8e-46 189.1 239 52.7
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 1.4e-45 187.6 257 47.9
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 2.4e-45 186.8 177 61.0
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 5.3e-45 185.7 303 45.5
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 7.0e-45 185.3 244 52.0
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 2.6e-44 183.3 134 66.4
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 4.5e-44 182.6 163 63.8
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 1.7e-43 180.6 274 47.8
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 3.8e-43 179.5 266 48.5
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 1.5e-42 177.6 171 59.1
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 2.5e-42 176.8 140 67.1
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.5e-42 176.8 140 67.1
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 5.5e-42 175.6 303 44.6
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 1.6e-41 174.1 310 44.2
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 1.6e-41 174.1 249 50.2
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.1e-41 173.7 140 66.4
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 2.7e-41 173.3 166 59.0
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.6e-41 172.9 140 66.4
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 4.7e-41 172.6 299 43.5
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 6.1e-41 172.2 156 60.3
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 6.1e-41 172.2 247 47.8
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 6.1e-41 172.2 301 46.2
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 8.0e-41 171.8 140 65.0
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 8.0e-41 171.8 302 43.4
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 1.0e-40 171.4 145 63.4
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 1.4e-40 171.0 224 50.4
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 2.3e-40 170.2 140 62.1
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 2.3e-40 170.2 237 47.7
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 3.0e-40 169.9 263 49.0
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 4.0e-40 169.5 294 43.9
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 4.0e-40 169.5 140 65.7
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 4.0e-40 169.5 177 59.9
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 8.8e-40 168.3 302 43.7
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 8.8e-40 168.3 152 61.8
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 8.8e-40 168.3 132 66.7
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 8.8e-40 168.3 293 45.7
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 1.5e-39 167.5 258 49.6
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 2.0e-39 167.2 311 42.1
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 2.0e-39 167.2 301 43.9
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 2.0e-39 167.2 296 45.3
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 2.0e-39 167.2 111 72.1
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 2.6e-39 166.8 304 44.4
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 2.6e-39 166.8 146 62.3
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 5.7e-39 165.6 112 75.0
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 7.5e-39 165.2 255 45.5
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 7.5e-39 165.2 134 66.4
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 9.7e-39 164.9 306 42.5
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 9.7e-39 164.9 210 50.0
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 9.7e-39 164.9 308 43.5
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 1.7e-38 164.1 276 44.2
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 2.2e-38 163.7 150 61.3
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 2.2e-38 163.7 259 47.1
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 3.7e-38 162.9 308 43.2
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 3.7e-38 162.9 243 49.0
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 4.8e-38 162.5 311 42.4
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 8.3e-38 161.8 285 44.2
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 8.3e-38 161.8 297 42.4
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 1.1e-37 161.4 288 44.4
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 1.4e-37 161.0 157 58.6
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 1.4e-37 161.0 302 42.1
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 7.0e-37 158.7 275 44.4
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 2.7e-36 156.8 287 42.2
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 4.5e-36 156.0 213 48.8
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 1.7e-35 154.1 156 57.7
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 1.5e-34 151.0 301 40.5
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 1.5e-34 151.0 301 40.5
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 4.2e-34 149.4 101 73.3
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 5.5e-34 149.1 307 41.0
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 1.6e-33 147.5 219 46.1
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 2.3e-32 143.7 260 41.9
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 2.0e-31 140.6 256 42.6
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 3.4e-31 139.8 251 41.0
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 4.4e-31 139.4 103 68.0
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 8.3e-30 135.2 257 39.3
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 3.1e-29 133.3 228 42.5
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 5.4e-29 132.5 210 44.8
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 5.4e-29 132.5 208 41.8
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 5.4e-29 132.5 210 44.8
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 7.0e-29 132.1 253 39.1
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 2.9e-27 126.7 224 43.8
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 7.2e-26 122.1 268 41.4
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 6.1e-25 119.0 137 49.6
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.5e-23 114.4 176 48.3
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.3e-19 100.5 90 60.0
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 2.3e-19 100.5 89 60.7
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 6.6e-19 99.0 88 61.4
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 1.9e-18 97.4 169 36.1
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 1.6e-17 94.4 55 85.5
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 6.1e-17 92.4 110 46.4
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 1.4e-16 91.3 118 41.5
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.4e-16 91.3 61 67.2
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.4e-16 91.3 61 67.2
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 4.0e-16 89.7 113 51.3
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.0e-16 89.7 59 67.8
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 5.8e-15 85.9 166 34.9
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 1.4e-13 81.3 54 74.1
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 7.0e-13 79.0 52 75.0
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 1.0e-11 75.1 51 72.5
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 1.6e-09 67.8 211 32.7
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 8.0e-09 65.5 115 35.7


User provided reference genes

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