Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G01607 Eucalyptus grandis HOM05D004461 ORTHO05D005543 1.9e-175 619.0 305 100.0
Eucgr.L00012 Eucalyptus grandis HOM05D004461 ORTHO05D005543 4.3e-175 617.8 305 99.7
PGR042G2498 Punica granatum HOM05D004461 ORTHO05D005543 1.8e-128 463.0 301 72.1
Manes.05G186753 Manihot esculenta HOM05D004461 ORTHO05D005543 1.7e-126 456.4 307 71.0
Lalb_Chr16g0384381 Lupinus albus HOM05D004461 ORTHO05D005543 1.8e-125 453.0 307 69.4
Lj4g0007039 Lotus japonicus HOM05D004461 ORTHO05D005543 4.1e-125 451.8 307 68.1
Phvul.003G059900 Phaseolus vulgaris HOM05D004461 ORTHO05D005543 5.4e-125 451.4 307 69.4
CSS0001430 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 1.2e-124 450.3 308 72.4
FvH4_1g00530 Fragaria vesca HOM05D004461 ORTHO05D005543 1.6e-124 449.9 308 70.1
RcHm_v2.0_Chr2g0085161 Rosa chinensis HOM05D004461 ORTHO05D005543 1.6e-124 449.9 308 70.8
Actinidia18410 Actinidia chinensis HOM05D004461 ORTHO05D005543 3.5e-124 448.7 307 70.7
FAN28G0648 Fragaria x ananassa HOM05D004461 ORTHO05D005543 1.0e-123 447.2 308 69.8
Glyma.02G138500 Glycine max HOM05D004461 ORTHO05D005543 1.3e-123 446.8 307 68.7
Dinv13732 Davidia involucrata HOM05D004461 ORTHO05D005543 2.2e-123 446.0 307 70.0
GSVIVG01038186001 Vitis vinifera HOM05D004461 ORTHO05D005543 2.9e-123 445.7 310 71.0
Dinv33221 Davidia involucrata HOM05D004461 ORTHO05D005543 5.0e-123 444.9 307 71.3
Prupe.7G266700 Prunus persica HOM05D004461 ORTHO05D005543 6.5e-123 444.5 308 70.1
CiPaw.01G169500 Carya illinoinensis HOM05D004461 ORTHO05D005543 1.5e-122 443.4 306 69.9
QL10p057561 Quercus lobata HOM05D004461 ORTHO05D005543 1.5e-122 443.4 303 69.6
arahy.Tifrunner.gnm1.ann1.3GG3GM Arachis hypogaea HOM05D004461 ORTHO05D005543 1.9e-122 443.0 307 68.7
arahy.Tifrunner.gnm1.ann1.XYX0FU Arachis hypogaea HOM05D004461 ORTHO05D005543 4.2e-122 441.8 307 68.4
VMungo0251G2958 Vigna mungo HOM05D004461 ORTHO05D005543 9.5e-122 440.7 307 67.8
Thecc.04G163000 Theobroma cacao HOM05D004461 ORTHO05D005543 1.6e-121 439.9 308 68.8
Glyma.07G206500 Glycine max HOM05D004461 ORTHO05D005543 3.6e-121 438.7 308 67.5
COL.COLO4_08073 Corchorus olitorius HOM05D004461 ORTHO05D005543 4.7e-121 438.3 308 68.2
Duzib212G0381 Durio zibethinus HOM05D004461 ORTHO05D005543 1.4e-120 436.8 310 68.7
CSS0004381 Camellia sinensis var. sinensis HOM05D004461 ORTHO05D005543 5.2e-120 434.9 308 69.8
Potri.013G128500 Populus trichocarpa HOM05D004461 ORTHO05D005543 5.2e-120 434.9 307 69.4
Sc25g0002880 Simmondsia chinensis HOM05D004461 ORTHO05D005543 6.8e-120 434.5 308 67.2
Medtr4g087530 Medicago truncatula HOM05D004461 ORTHO05D005543 1.5e-119 433.3 309 67.0
Rhsim09G0007800 Rhododendron simsii HOM05D004461 ORTHO05D005543 1.5e-119 433.3 308 69.2
Duzib268G0878 Durio zibethinus HOM05D004461 ORTHO05D005543 2.0e-119 433.0 311 68.8
FAN23G0135 Fragaria x ananassa HOM05D004461 ORTHO05D005543 9.8e-119 430.6 336 64.0
CANSAT56G3181 Cannabis sativa HOM05D004461 ORTHO05D005543 1.3e-118 430.3 308 68.8
MD15G1148100 Malus domestica HOM05D004461 ORTHO05D005543 1.7e-118 429.9 307 67.8
Haze_00857 Corylus avellana HOM05D004461 ORTHO05D005543 6.3e-118 427.9 309 68.3
Gohir.D09G212800 Gossypium hirsutum HOM05D004461 ORTHO05D005543 8.3e-118 427.6 308 68.5
Atru.chr4.1475 Acer truncatum HOM05D004461 ORTHO05D005543 1.1e-117 427.2 310 66.8
Ca_18625_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 1.4e-117 426.8 309 65.7
Psat7g119400 Pisum sativum HOM05D004461 ORTHO05D005543 1.4e-117 426.8 309 65.4
MSTRG.9726 Avicennia marina HOM05D004461 ORTHO05D005543 1.8e-117 426.4 305 66.6
Gorai.006G232600 Gossypium raimondii HOM05D004461 ORTHO05D005543 1.8e-117 426.4 308 68.2
EL10Ac3g06109 Beta vulgaris HOM05D004461 ORTHO05D005543 2.4e-117 426.0 309 65.0
MD02G1004400 Malus domestica HOM05D004461 ORTHO05D005543 1.2e-116 423.7 307 67.1
TWI75G0299 Tripterygium wilfordii HOM05D004461 ORTHO05D005543 2.0e-116 422.9 309 68.3
Nitab4.5_0002660g0040 Nicotiana tabacum HOM05D004461 ORTHO05D005543 3.5e-116 422.2 308 65.9
Cc03_g14480 Coffea canephora HOM05D004461 ORTHO05D005543 4.5e-116 421.8 307 66.8
Gohir.A09G213618 Gossypium hirsutum HOM05D004461 ORTHO05D005543 1.0e-115 420.6 308 67.5
PSO541G3578 Papaver somniferum HOM05D004461 ORTHO05D005543 2.9e-115 419.1 307 65.8
Sabra13G0107300 Salix brachista HOM05D004461 ORTHO05D005543 3.8e-115 418.7 307 66.4
PSO675G1807 Papaver somniferum HOM05D004461 ORTHO05D005543 5.0e-115 418.3 307 65.8
Migut.A00584 Erythranthe guttata HOM05D004461 ORTHO05D005543 1.1e-114 417.2 305 63.9
Hund22530 Selenicereus undatus HOM05D004461 ORTHO05D005543 1.5e-114 416.8 310 65.8
ClCG11G016890 Citrullus lanatus HOM05D004461 ORTHO05D005543 1.9e-114 416.4 312 66.0
Ca_18631_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 1.6e-113 413.3 305 64.6
SalBow1G4521 Salvia bowleyana HOM05D004461 ORTHO05D005543 1.6e-113 413.3 305 65.2
CsaV3_4G032510 Cucumis sativus L. HOM05D004461 ORTHO05D005543 2.1e-113 412.9 312 65.7
SalBow1G6497 Salvia bowleyana HOM05D004461 ORTHO05D005543 2.1e-113 412.9 305 65.2
AUR62023774 Chenopodium quinoa HOM05D004461 ORTHO05D005543 3.6e-113 412.1 309 64.1
CAN.G1190.30 Capsicum annuum HOM05D004461 ORTHO05D005543 4.7e-113 411.8 308 64.6
AUR62002415 Chenopodium quinoa HOM05D004461 ORTHO05D005543 8.0e-113 411.0 309 64.1
Sopen08g013610 Solanum pennellii HOM05D004461 ORTHO05D005543 1.0e-112 410.6 307 64.8
Nitab4.5_0000474g0020 Nicotiana tabacum HOM05D004461 ORTHO05D005543 6.8e-112 407.9 302 64.9
Aqoxy1G02097 Aquilegia oxysepala HOM05D004461 ORTHO05D005543 4.4e-111 405.2 308 64.3
TAR623G0001 Trochodendron aralioides HOM05D004461 ORTHO05D005543 9.8e-111 404.1 309 66.3
Sp5g03430 Schrenkiella parvula HOM05D004461 ORTHO05D005543 5.4e-109 398.3 308 62.7
BcaC08g45004 Brassica carinata HOM05D004461 ORTHO05D005543 1.2e-108 397.1 308 62.7
BolC6t37801H Brassica oleracea HOM05D004461 ORTHO05D005543 1.2e-108 397.1 308 62.7
MELO3C026365.2 Cucumis melo HOM05D004461 ORTHO05D005543 2.0e-108 396.4 312 64.1
C06p26390 Brassica napus HOM05D004461 ORTHO05D005543 4.6e-108 395.2 308 62.3
FAN26G3123 Fragaria x ananassa HOM05D004461 ORTHO05D005543 5.9e-108 394.8 278 68.3
BraA07t30125Z Brassica rapa HOM05D004461 ORTHO05D005543 1.0e-107 394.0 308 63.0
Carub.0005s2648 Capsella rubella HOM05D004461 ORTHO05D005543 1.0e-107 394.0 308 62.7
Nn1g07161 Nelumbo nucifera HOM05D004461 ORTHO05D005543 1.7e-107 393.3 308 65.3
AL5G41810 Arabidopsis lyrata HOM05D004461 ORTHO05D005543 3.0e-107 392.5 307 62.9
A07p24810 Brassica napus HOM05D004461 ORTHO05D005543 3.9e-107 392.1 308 63.0
DCAR_005452 Daucus carota HOM05D004461 ORTHO05D005543 8.6e-107 391.0 307 60.3
BcaB02g07448 Brassica carinata HOM05D004461 ORTHO05D005543 2.5e-106 389.4 308 61.7
Thhalv10005739m.g Eutrema salsugineum HOM05D004461 ORTHO05D005543 9.5e-106 387.5 305 61.6
A09p52040 Brassica napus HOM05D004461 ORTHO05D005543 3.6e-105 385.6 309 62.5
BraA09t40637Z Brassica rapa HOM05D004461 ORTHO05D005543 4.7e-105 385.2 309 62.1
ECA233G2329 Erigeron canadensis HOM05D004461 ORTHO05D005543 1.4e-104 383.6 305 61.6
AT3G59770 Arabidopsis thaliana HOM05D004461 ORTHO05D005543 1.8e-104 383.3 308 61.4
BcaC07g40502 Brassica carinata HOM05D004461 ORTHO05D005543 2.3e-104 382.9 310 61.9
C08p34720 Brassica napus HOM05D004461 ORTHO05D005543 2.3e-104 382.9 310 61.9
BolC8t51074H Brassica oleracea HOM05D004461 ORTHO05D005543 2.3e-104 382.9 310 61.9
BcaC07g40444 Brassica carinata HOM05D004461 ORTHO05D005543 3.1e-104 382.5 311 62.4
Lju470C15G3 Lonicera japonica HOM05D004461 ORTHO05D005543 1.2e-103 380.6 308 62.7
Aa31LG10G14020 Aethionema arabicum HOM05D004461 ORTHO05D005543 1.7e-102 376.7 323 58.8
CARHR170110 Cardamine hirsuta HOM05D004461 ORTHO05D005543 2.4e-101 372.9 303 59.1
ATR0796G101 Amborella trichopoda HOM05D004461 ORTHO05D005543 9.2e-101 370.9 313 58.8
unitig_736.g22475 Utricularia gibba HOM05D004461 ORTHO05D005543 5.6e-98 361.7 305 59.0
Lsat_1_v5_gn_7_77561 Lactuca sativa HOM05D004461 ORTHO05D005543 2.0e-95 353.2 308 56.5
Gohir.A02G008301 Gossypium hirsutum HOM05D004461 ORTHO05D005543 2.5e-90 336.3 306 57.8
HPP92_017806 Vanilla planifolia HOM05D004461 ORTHO05D005543 3.3e-90 335.9 308 52.9
Gorai.005G010100 Gossypium raimondii HOM05D004461 ORTHO05D005543 4.7e-89 332.0 297 58.9
Gohir.D02G008532 Gossypium hirsutum HOM05D004461 ORTHO05D005543 8.1e-89 331.3 306 57.5
HanXRQChr04g0109651 Helianthus annuus HOM05D004461 ORTHO05D005543 1.4e-88 330.5 307 56.4
SGA_v2.0_scaffold96G29048 Striga asiatica HOM05D004461 ORTHO05D005543 1.4e-88 330.5 296 55.1
SGA_v2.0_scaffold90G27634 Striga asiatica HOM05D004461 ORTHO05D005543 2.0e-87 326.6 286 55.9
HanXRQChr01g0023421 Helianthus annuus HOM05D004461 ORTHO05D005543 6.4e-86 321.6 307 53.1
ECA248G0881 Erigeron canadensis HOM05D004461 ORTHO05D005543 2.1e-84 316.6 310 52.6
CDE04G2300 Ceratophyllum demersum HOM05D004461 ORTHO05D005543 1.5e-82 310.5 307 50.2
SEGI_23669 Sequoiadendron giganteum HOM05D004461 ORTHO05D005543 7.3e-82 308.1 311 50.8
Lsat_1_v5_gn_1_74200 Lactuca sativa HOM05D004461 ORTHO05D005543 1.8e-80 303.5 310 52.3
Zm00001eb208570 Zea mays HOM05D004461 ORTHO05D005543 3.4e-79 299.3 314 51.9
Atru.chr4.1504 Acer truncatum HOM05D004461 ORTHO05D005543 1.0e-75 287.7 213 67.6
Os01g0355600 Oryza sativa ssp. japonica HOM05D004461 ORTHO05D005543 2.8e-73 279.6 308 48.7
Peaxi162Scf00883g00910 Petunia axillaris HOM05D004461 ORTHO05D005543 6.9e-72 275.0 213 64.3
Solyc08g044400.3 Solanum lycopersicum HOM05D004461 ORTHO05D005543 2.0e-71 273.5 213 63.8
Nn1g03495 Nelumbo nucifera HOM05D004461 ORTHO05D005543 2.6e-71 273.1 214 62.1
TAR624G0217 Trochodendron aralioides HOM05D004461 ORTHO05D005543 4.6e-68 262.3 238 59.2
Pp3c2_24100 Physcomitrium patens HOM05D004461 ORTHO05D005543 6.7e-51 205.3 313 39.3
SMO165G0142 Selaginella moellendorffii HOM05D004461 ORTHO05D005543 2.5e-42 176.8 320 35.3
AagrBONN_evm.TU.Sc2ySwM_362.1413 Anthoceros agrestis HOM05D004461 ORTHO05D005543 1.1e-40 171.4 304 35.9
Mapoly0056s0107 Marchantia polymorpha HOM05D004461 ORTHO05D005543 1.5e-39 167.5 296 34.5
Cpa.g.sc343.6 Carica papaya HOM05D004461 ORTHO05D005543 9.4e-37 158.3 157 54.8
Solyc08g044410.1 Solanum lycopersicum HOM05D004461 ORTHO05D005543 2.6e-31 140.2 96 64.6
Atru.chr4.1505 Acer truncatum HOM05D004461 ORTHO05D005543 5.9e-31 139.0 90 67.8
Nn1g03496 Nelumbo nucifera HOM05D004461 ORTHO05D005543 2.5e-29 133.7 90 68.9
CBR_g55037 Chara braunii HOM05D004461 ORTHO05D005543 1.4e-19 101.3 361 26.6
BcaB02g08211 Brassica carinata HOM05D021787 ORTHO05D005543 4.1e-16 89.7 102 45.1
Lsat_1_v5_gn_2_119641 Lactuca sativa HOM05D004461 ORTHO05D029960 2.4e-08 63.9 52 53.8
Lsat_1_v5_gn_3_101581 Lactuca sativa HOM05D004461 ORTHO05D029960 1.6e-07 61.2 52 53.8
Ciclev10020582m.g Citrus clementina HOM05D002050 ORTHO05D001949 3.8e-06 56.6 44 59.1


User provided reference genes

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