Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G01508 Eucalyptus grandis HOM05D005845 ORTHO05D007067 1.9e-72 275.8 144 100.0
Eucgr.K03081 Eucalyptus grandis HOM05D005845 ORTHO05D007067 2.8e-47 192.2 144 73.6
Eucgr.K03092 Eucalyptus grandis HOM05D005845 ORTHO05D007067 2.8e-47 192.2 144 73.6
Eucgr.K03089 Eucalyptus grandis HOM05D005845 ORTHO05D007067 1.2e-42 176.8 133 72.2
Eucgr.K03086 Eucalyptus grandis HOM05D005845 ORTHO05D007067 1.6e-34 149.8 119 69.7
Eucgr.K03094 Eucalyptus grandis HOM05D005845 ORTHO05D007067 4.3e-32 141.7 100 77.0
Nn2g13425 Nelumbo nucifera HOM05D005845 ORTHO05D007067 1.5e-29 133.3 134 58.2
Rhsim05G0194900 Rhododendron simsii HOM05D005845 ORTHO05D007067 2.9e-28 129.0 140 54.3
CSS0047206 Camellia sinensis var. sinensis HOM05D005845 ORTHO05D007067 6.4e-28 127.9 142 54.9
Prupe.6G259200 Prunus persica HOM05D005845 ORTHO05D007067 1.9e-27 126.3 147 53.1
Rhsim04G0158900 Rhododendron simsii HOM05D005845 ORTHO05D007067 1.9e-27 126.3 145 55.2
RcHm_v2.0_Chr3g0466071 Rosa chinensis HOM05D005845 ORTHO05D007067 1.9e-27 126.3 144 56.2
CiPaw.10G147000 Carya illinoinensis HOM05D005845 ORTHO05D007067 2.4e-27 125.9 72 83.3
vmacro20178 Vaccinium macrocarpon HOM05D005845 ORTHO05D007067 4.1e-27 125.2 122 57.4
COL.COLO4_14759 Corchorus olitorius HOM05D005845 ORTHO05D007067 5.4e-27 124.8 142 54.9
Duzib106G0947 Durio zibethinus HOM05D005845 ORTHO05D007067 5.4e-27 124.8 142 53.5
TAR633G1058 Trochodendron aralioides HOM05D005845 ORTHO05D007067 7.1e-27 124.4 142 50.0
TAR633G1228 Trochodendron aralioides HOM05D005845 ORTHO05D007067 7.1e-27 124.4 150 54.0
Haze_20829 Corylus avellana HOM05D005320 ORTHO05D007922 9.2e-27 124.0 72 83.3
Atru.chr8.2014 Acer truncatum HOM05D005320 ORTHO05D007922 1.2e-26 123.6 109 66.1
Cpa.g.sc3458.2 Carica papaya HOM05D005845 ORTHO05D007067 1.2e-26 123.6 138 54.3
PGR004G0892 Punica granatum HOM05D005845 ORTHO05D007067 1.2e-26 123.6 139 55.4
Manes.09G092274 Manihot esculenta HOM05D005845 ORTHO05D007067 1.6e-26 123.2 115 57.4
ClCG10G021330 Citrullus lanatus HOM05D005845 ORTHO05D007067 2.1e-26 122.9 66 89.4
Gohir.A04G065200 Gossypium hirsutum HOM05D005845 ORTHO05D007067 2.1e-26 122.9 147 52.4
Gorai.009G405900 Gossypium raimondii HOM05D005845 ORTHO05D007067 2.1e-26 122.9 147 52.4
Hma1.2p1_0936F.1_g238990 Hydrangea macrophylla HOM05D005845 ORTHO05D007067 2.1e-26 122.9 142 52.8
Aqoxy1G00879 Aquilegia oxysepala HOM05D005845 ORTHO05D007067 2.7e-26 122.5 104 60.6
FvH4_6g13240 Fragaria vesca HOM05D005845 ORTHO05D007067 3.5e-26 122.1 144 54.9
FAN14G4222 Fragaria x ananassa HOM05D005845 ORTHO05D007067 3.5e-26 122.1 144 54.9
Gorai.001G012600 Gossypium raimondii HOM05D005845 ORTHO05D007067 3.5e-26 122.1 147 52.4
QL07p030115 Quercus lobata HOM05D005845 ORTHO05D007067 4.6e-26 121.7 144 50.0
QL07p030897 Quercus lobata HOM05D005845 ORTHO05D007067 4.6e-26 121.7 144 50.0
TWI77G0787 Tripterygium wilfordii HOM05D005845 ORTHO05D007067 4.6e-26 121.7 142 54.2
CsaV3_3G034730 Cucumis sativus L. HOM05D005845 ORTHO05D007067 6.0e-26 121.3 66 87.9
Lj3A964T57 Lonicera japonica HOM05D005845 ORTHO05D007067 6.0e-26 121.3 118 54.2
Potri.006G088200 Populus trichocarpa HOM05D005845 ORTHO05D007067 6.0e-26 121.3 64 89.1
Lalb_Chr03g0042411 Lupinus albus HOM05D005845 ORTHO05D007067 7.8e-26 120.9 75 78.7
SalBow1G4544 Salvia bowleyana HOM05D005845 ORTHO05D007067 7.8e-26 120.9 72 80.6
SalBow7G2664 Salvia bowleyana HOM05D005845 ORTHO05D007067 7.8e-26 120.9 72 80.6
BcaC05g29521 Brassica carinata HOM05D005845 ORTHO05D007067 1.0e-25 120.6 135 54.8
Ciclev10013078m.g Citrus clementina HOM05D005845 ORTHO05D007067 1.0e-25 120.6 141 53.2
Gohir.A07G012100 Gossypium hirsutum HOM05D005845 ORTHO05D007067 1.0e-25 120.6 147 51.7
Gohir.D07G011900 Gossypium hirsutum HOM05D005845 ORTHO05D007067 1.0e-25 120.6 147 51.7
HanXRQChr02g0050481 Helianthus annuus HOM05D005845 ORTHO05D007067 1.0e-25 120.6 68 83.8
Eucgr.G00292 Eucalyptus grandis HOM05D005845 ORTHO05D007067 1.3e-25 120.2 61 96.7
FAN02G1947 Fragaria x ananassa HOM05D005845 ORTHO05D007067 1.3e-25 120.2 144 53.5
Sed0011119 Sechium edule HOM05D005845 ORTHO05D007067 1.3e-25 120.2 66 86.4
GSVIVG01034129001 Vitis vinifera HOM05D005845 ORTHO05D007067 1.3e-25 120.2 86 72.1
MD12G1145500 Malus domestica HOM05D005845 ORTHO05D007067 1.7e-25 119.8 144 53.5
Cc06_g02340 Coffea canephora HOM05D005845 ORTHO05D007067 2.3e-25 119.4 139 51.1
Gohir.D04G102600 Gossypium hirsutum HOM05D005845 ORTHO05D007067 3.9e-25 118.6 147 51.0
Lj1g0012131 Lotus japonicus HOM05D005845 ORTHO05D007067 3.9e-25 118.6 66 86.4
Os05g0292800 Oryza sativa ssp. japonica HOM05D005845 ORTHO05D007067 3.9e-25 118.6 85 72.9
Zm00001eb299980 Zea mays HOM05D005845 ORTHO05D007067 3.9e-25 118.6 108 58.3
arahy.Tifrunner.gnm1.ann1.CX8U58 Arachis hypogaea HOM05D005845 ORTHO05D007067 5.1e-25 118.2 90 68.9
arahy.Tifrunner.gnm1.ann1.D19TT3 Arachis hypogaea HOM05D005845 ORTHO05D007067 5.1e-25 118.2 66 86.4
DCAR_028759 Daucus carota HOM05D005845 ORTHO05D007067 5.1e-25 118.2 134 52.2
Lsat_1_v5_gn_6_22520 Lactuca sativa HOM05D005845 ORTHO05D007067 5.1e-25 118.2 112 56.2
arahy.Tifrunner.gnm1.ann1.1Q4DHH Arachis hypogaea HOM05D005845 ORTHO05D007067 6.6e-25 117.9 104 65.4
ECA233G0482 Erigeron canadensis HOM05D005845 ORTHO05D007067 6.6e-25 117.9 68 79.4
BcaC05g29660 Brassica carinata HOM05D005845 ORTHO05D007067 1.1e-24 117.1 135 54.8
C05p58690 Brassica napus HOM05D005845 ORTHO05D007067 1.1e-24 117.1 135 54.8
BolC5t34518H Brassica oleracea HOM05D005845 ORTHO05D007067 1.1e-24 117.1 135 54.8
Zm00001eb090340 Zea mays HOM05D005845 ORTHO05D007067 1.1e-24 117.1 69 82.6
CANSAT35G1952 Cannabis sativa HOM05D005845 ORTHO05D007067 1.5e-24 116.7 68 83.8
Psat3g137040 Pisum sativum HOM05D005845 ORTHO05D007067 1.5e-24 116.7 83 72.3
PSO339G6396 Papaver somniferum HOM05D005845 ORTHO05D007067 2.5e-24 115.9 145 49.7
THA.LOC104816255 Tarenaya hassleriana HOM05D005845 ORTHO05D007067 2.5e-24 115.9 135 53.3
TWI74G0153 Tripterygium wilfordii HOM05D005845 ORTHO05D007067 2.5e-24 115.9 145 50.3
MD04G1132800 Malus domestica HOM05D005845 ORTHO05D007067 3.3e-24 115.5 144 53.5
Nitab4.5_0003394g0030 Nicotiana tabacum HOM05D005845 ORTHO05D007067 3.3e-24 115.5 109 58.7
Sc01g0004490 Simmondsia chinensis HOM05D005845 ORTHO05D007067 3.3e-24 115.5 68 83.8
AUR62018118 Chenopodium quinoa HOM05D005845 ORTHO05D007067 4.3e-24 115.2 68 79.4
Phvul.008G118000 Phaseolus vulgaris HOM05D005845 ORTHO05D007067 4.3e-24 115.2 66 83.3
AL6G11350 Arabidopsis lyrata HOM05D005845 ORTHO05D007067 5.6e-24 114.8 137 54.7
A05p39650 Brassica napus HOM05D005845 ORTHO05D007067 5.6e-24 114.8 100 63.0
BraA05t22747Z Brassica rapa HOM05D005845 ORTHO05D007067 5.6e-24 114.8 100 63.0
Carub.0006s0096 Capsella rubella HOM05D005845 ORTHO05D007067 5.6e-24 114.8 137 53.3
CDE06G2558 Ceratophyllum demersum HOM05D000816 ORTHO05D009154 5.6e-24 114.8 68 77.9
PSO513G0176 Papaver somniferum HOM05D005845 ORTHO05D007067 5.6e-24 114.8 144 48.6
Thecc.05G035600 Theobroma cacao HOM05D005845 ORTHO05D007067 5.6e-24 114.8 64 84.4
AUR62034449 Chenopodium quinoa HOM05D005845 ORTHO05D007067 7.3e-24 114.4 66 81.8
Migut.L01960 Erythranthe guttata HOM05D005845 ORTHO05D007067 7.3e-24 114.4 64 82.8
Thhalv10015070m.g Eutrema salsugineum HOM05D005845 ORTHO05D007067 7.3e-24 114.4 109 61.5
PGSC0003DMG400008901 Solanum tuberosum HOM05D005845 ORTHO05D007067 1.2e-23 113.6 137 49.6
VMungo1383G2075 Vigna mungo HOM05D005845 ORTHO05D007067 1.2e-23 113.6 66 81.8
ATR0559G337 Amborella trichopoda HOM05D005845 ORTHO05D007067 1.6e-23 113.2 68 80.9
Nitab4.5_0000705g0030 Nicotiana tabacum HOM05D005845 ORTHO05D007067 1.6e-23 113.2 145 50.3
Sp3g07700 Schrenkiella parvula HOM05D005845 ORTHO05D007067 1.6e-23 113.2 113 59.3
arahy.Tifrunner.gnm1.ann1.1BNP0N Arachis hypogaea HOM05D005845 ORTHO05D007067 2.1e-23 112.8 146 50.7
Glyma.07G135300 Glycine max HOM05D005845 ORTHO05D007067 2.8e-23 112.5 144 47.2
A03p00540 Brassica napus HOM05D005845 ORTHO05D007067 3.6e-23 112.1 109 59.6
Peaxi162Scf00527g00733 Petunia axillaris HOM05D005845 ORTHO05D007067 3.6e-23 112.1 145 50.3
C03p00800 Brassica napus HOM05D005845 ORTHO05D007067 4.7e-23 111.7 152 46.1
BolC3t12643H Brassica oleracea HOM05D005845 ORTHO05D007067 4.7e-23 111.7 152 46.1
CARHR211240 Cardamine hirsuta HOM05D005845 ORTHO05D007067 4.7e-23 111.7 103 61.2
Medtr7g062970 Medicago truncatula HOM05D005845 ORTHO05D007067 4.7e-23 111.7 113 55.8
Ca_07339_v3 Cicer arietinum L. HOM05D005845 ORTHO05D007067 8.1e-23 110.9 64 82.8
MBI05_g35632_MAGBIO Magnolia biondii HOM05D005845 ORTHO05D007067 8.1e-23 110.9 144 49.3
Aa31LG3G1810 Aethionema arabicum HOM05D005845 ORTHO05D007067 1.1e-22 110.5 111 57.7
BcaB01g06068 Brassica carinata HOM05D005845 ORTHO05D007067 1.1e-22 110.5 112 58.0
SEGI_39626 Sequoiadendron giganteum HOM05D005845 ORTHO05D007067 1.1e-22 110.5 68 79.4
CARHR083690 Cardamine hirsuta HOM05D005845 ORTHO05D007067 1.4e-22 110.2 143 51.0
FAN05G4617 Fragaria x ananassa HOM05D005845 ORTHO05D007067 1.4e-22 110.2 149 49.7
Sabra06G0067200 Salix brachista HOM05D000102 ORTHO05D004225 1.4e-22 110.2 57 89.5
AL3G20470 Arabidopsis lyrata HOM05D005845 ORTHO05D007067 1.8e-22 109.8 113 57.5
CAN.G597.2 Capsicum annuum HOM05D005845 ORTHO05D007067 2.4e-22 109.4 116 52.6
Os12g0480100 Oryza sativa ssp. japonica HOM05D005845 ORTHO05D007067 2.4e-22 109.4 83 63.9
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 2.4e-22 109.4 64 79.7
AT5G02120 Arabidopsis thaliana HOM05D005845 ORTHO05D007067 3.1e-22 109.0 64 82.8
BraA03t09444Z Brassica rapa HOM05D005845 ORTHO05D007067 3.1e-22 109.0 151 45.7
Solyc09g011010.3 Solanum lycopersicum HOM05D005845 ORTHO05D007067 3.1e-22 109.0 144 46.5
Sopen09g005730 Solanum pennellii HOM05D005845 ORTHO05D007067 4.0e-22 108.6 144 46.5
Sp6g40320 Schrenkiella parvula HOM05D005845 ORTHO05D007067 5.2e-22 108.2 111 56.8
EL10Ac2g03022 Beta vulgaris HOM05D005845 ORTHO05D007067 9.0e-22 107.5 64 81.2
BcaB01g06213 Brassica carinata HOM05D005845 ORTHO05D007067 1.5e-21 106.7 64 81.2
Lalb_Chr01g0022631 Lupinus albus HOM05D005845 ORTHO05D007067 1.5e-21 106.7 64 79.7
Carub.0003s0843 Capsella rubella HOM05D005845 ORTHO05D007067 9.9e-21 104.0 114 55.3
MELO3C009241.2 Cucumis melo HOM05D005845 ORTHO05D007067 9.9e-21 104.0 97 58.8
Oeu023072.1 Olea europaea HOM05D005845 ORTHO05D007067 6.4e-20 101.3 60 76.7
Zm00001eb372120 Zea mays HOM05D005845 ORTHO05D007067 7.1e-19 97.8 55 81.8
Actinidia11275 Actinidia chinensis HOM05D005845 ORTHO05D007067 1.2e-18 97.1 116 51.7
Pp3c18_21050 Physcomitrium patens HOM05D005845 ORTHO05D007067 1.5e-16 90.1 61 68.9
Pp3c22_8010 Physcomitrium patens HOM05D005845 ORTHO05D007067 1.5e-16 90.1 73 60.3
AagrBONN_evm.TU.Sc2ySwM_344.1593 Anthoceros agrestis HOM05D005845 ORTHO05D007067 2.5e-16 89.4 78 56.4
Dinv35574 Davidia involucrata HOM05D005845 ORTHO05D007067 2.5e-16 89.4 117 45.3
HPP92_019240 Vanilla planifolia HOM05D005845 ORTHO05D007067 7.3e-16 87.8 56 75.0
Mapoly0151s0005 Marchantia polymorpha HOM05D005845 ORTHO05D007067 6.2e-15 84.7 98 50.0
TAR369G0629 Trochodendron aralioides HOM05D005845 ORTHO05D007067 8.1e-15 84.3 121 45.5
Glyma.18G185300 Glycine max HOM05D005845 ORTHO05D007067 4.0e-14 82.0 44 88.6
TPR.G34843 Trifolium pratense HOM05D005845 ORTHO05D007067 3.4e-13 79.0 43 81.4
Rhsim04G0160800 Rhododendron simsii HOM05D005845 ORTHO05D007067 7.6e-13 77.8 148 43.2
SEGI_14936 Sequoiadendron giganteum HOM05D005845 ORTHO05D007067 9.9e-13 77.4 47 76.6
CBR_g4596 Chara braunii HOM05D005845 ORTHO05D007067 6.4e-12 74.7 77 49.4
TPR.G22204 Trifolium pratense HOM05D000026 ORTHO05D007067 1.9e-11 73.2 48 66.7


User provided reference genes

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