Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 7.2e-101 370.5 182 100.0
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 7.8e-55 217.6 224 54.0
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 8.6e-54 214.2 226 52.2
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 4.0e-51 205.3 224 50.9
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 2.0e-50 203.0 218 53.2
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 5.8e-50 201.4 231 51.5
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 9.8e-50 200.7 226 50.0
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 1.7e-49 199.9 226 50.4
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 2.2e-49 199.5 157 67.5
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 2.2e-49 199.5 224 49.6
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 4.9e-49 198.4 230 50.9
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 4.9e-49 198.4 222 51.4
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 1.1e-48 197.2 227 50.2
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 5.4e-48 194.9 219 48.4
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 1.2e-47 193.7 222 46.8
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 1.0e-46 190.7 255 46.7
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 3.0e-46 189.1 224 47.3
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 1.5e-45 186.8 226 49.6
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 1.2e-44 183.7 216 49.5
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 1.6e-44 183.3 233 47.2
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 1.6e-44 183.3 223 49.3
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 1.1e-43 180.6 203 48.8
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 3.1e-43 179.1 229 43.7
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 4.0e-43 178.7 210 45.7
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 8.9e-43 177.6 229 43.7
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 1.5e-42 176.8 223 48.9
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 2.6e-42 176.0 224 46.4
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 1.1e-40 170.6 221 46.2
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 3.2e-40 169.1 222 45.5
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 2.1e-39 166.4 222 46.8
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 2.7e-39 166.0 248 40.3
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 7.8e-39 164.5 248 40.3
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 3.9e-38 162.2 226 42.5
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 5.1e-38 161.8 247 40.5
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 1.1e-37 160.6 222 42.8
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 1.1e-37 160.6 222 42.8
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 1.5e-37 160.2 223 43.5
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 1.6e-36 156.8 268 37.3
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 4.7e-36 155.2 230 43.9
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 1.4e-35 153.7 260 39.6
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 8.4e-33 144.4 249 37.8
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 2.1e-31 139.8 217 40.1
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 4.6e-31 138.7 214 40.2
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 1.7e-30 136.7 197 44.2
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 3.9e-30 135.6 234 41.9
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 8.6e-30 134.4 209 43.1
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 1.8e-27 126.7 213 41.8
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 1.4e-24 117.1 241 34.4
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 2.4e-24 116.3 160 42.5
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 3.9e-22 109.0 114 51.8
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 1.3e-20 104.0 265 30.6
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 1.2e-18 97.4 128 43.8
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 2.6e-18 96.3 71 67.6
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 2.6e-18 96.3 107 44.9
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 4.5e-18 95.5 167 35.9
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 1.3e-17 94.0 58 74.1
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 1.1e-16 90.9 76 57.9
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 4.2e-16 89.0 111 44.1
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 4.2e-16 89.0 111 44.1
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 2.1e-15 86.7 115 45.2
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 7.9e-15 84.7 111 43.2
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 6.9e-11 71.6 49 69.4
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 5.8e-10 68.6 100 42.0
QL05p004958 Quercus lobata HOM05D008254 ORTHO05D010423 1.8e-06 57.0 91 36.3


User provided reference genes

Program Settings