Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G01462 Eucalyptus grandis HOM05D000988 ORTHO05D000724 6.1e-101 370.9 201 100.0
Eucgr.G01461 Eucalyptus grandis HOM05D000988 ORTHO05D000724 9.8e-67 257.3 209 73.2
Eucgr.G01464 Eucalyptus grandis HOM05D000988 ORTHO05D000724 8.6e-39 164.5 152 67.1
Eucgr.E01482 Eucalyptus grandis HOM05D000988 ORTHO05D000724 1.2e-27 127.5 132 64.4
Thecc.02G098700 Theobroma cacao HOM05D000988 ORTHO05D000724 1.6e-16 90.5 204 39.2
Gohir.D13G037900 Gossypium hirsutum HOM05D000988 ORTHO05D000724 3.0e-15 86.3 213 39.4
Duzib248G0376 Durio zibethinus HOM05D000988 ORTHO05D000724 1.5e-14 84.0 208 38.5
Gohir.A13G039400 Gossypium hirsutum HOM05D000988 ORTHO05D000724 1.5e-14 84.0 209 37.8
Duzib052G0835 Durio zibethinus HOM05D000988 ORTHO05D000724 2.5e-14 83.2 206 37.4
COL.COLO4_32674 Corchorus olitorius HOM05D000988 ORTHO05D000724 7.3e-14 81.6 211 37.9
Duzib132G0233 Durio zibethinus HOM05D000988 ORTHO05D000724 2.8e-13 79.7 200 38.5
Potri.004G142100 Populus trichocarpa HOM05D000988 ORTHO05D000724 8.1e-13 78.2 162 45.7
Ciclev10029306m.g Citrus clementina HOM05D000988 ORTHO05D000724 1.4e-12 77.4 139 40.3
Potri.009G103600 Populus trichocarpa HOM05D000988 ORTHO05D000724 3.1e-12 76.3 108 49.1
Sabra09G0079300 Salix brachista HOM05D000988 ORTHO05D000724 1.5e-11 73.9 120 43.3
Cfa005471 Carpinus fangiana HOM05D000988 ORTHO05D000724 9.9e-11 71.2 198 34.3
CiPaw.05G052300 Carya illinoinensis HOM05D000988 ORTHO05D000724 1.3e-10 70.9 203 34.5
Manes.07G081800 Manihot esculenta HOM05D000988 ORTHO05D000724 2.2e-10 70.1 167 40.1
Dinv23609 Davidia involucrata HOM05D000988 ORTHO05D000724 3.8e-10 69.3 162 38.9
Hma1.2p1_0370F.1_g137940 Hydrangea macrophylla HOM05D000988 ORTHO05D000724 4.9e-10 68.9 150 38.7
Cpa.g.sc62.28 Carica papaya HOM05D000988 ORTHO05D000724 1.1e-09 67.8 163 36.8
CiPaw.06G142900 Carya illinoinensis HOM05D000988 ORTHO05D000724 1.1e-09 67.8 212 34.0
Haze_01841 Corylus avellana HOM05D000988 ORTHO05D000724 1.4e-09 67.4 204 35.3
Haze_01846 Corylus avellana HOM05D000988 ORTHO05D000724 1.4e-09 67.4 204 35.3
Gohir.A03G190200 Gossypium hirsutum HOM05D000988 ORTHO05D000724 1.4e-09 67.4 105 45.7
Gorai.013G042600 Gossypium raimondii HOM05D000988 ORTHO05D000724 1.4e-09 67.4 259 32.8
Actinidia00450 Actinidia chinensis HOM05D000988 ORTHO05D000724 1.9e-09 67.0 139 38.1
QL11p036196 Quercus lobata HOM05D000988 ORTHO05D000724 4.2e-09 65.9 189 34.9
Os11g0614800 Oryza sativa ssp. japonica HOM05D000988 ORTHO05D000724 5.4e-09 65.5 90 45.6
Actinidia12960 Actinidia chinensis HOM05D000988 ORTHO05D000724 7.1e-09 65.1 144 40.3
Sabra04G0094000 Salix brachista HOM05D000988 ORTHO05D000724 7.1e-09 65.1 159 40.9
CSS0048797 Camellia sinensis var. sinensis HOM05D000988 ORTHO05D000724 1.2e-08 64.3 207 35.7
Gorai.005G238900 Gossypium raimondii HOM05D000988 ORTHO05D000724 1.2e-08 64.3 108 46.3
Nn5g30231 Nelumbo nucifera HOM05D000988 ORTHO05D000724 1.2e-08 64.3 189 34.4
vmacro02192 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 1.2e-08 64.3 151 37.7
Sed0006444 Sechium edule HOM05D000988 ORTHO05D000724 1.6e-08 63.9 201 33.8
Hma1.2p1_1849F.1_g305250 Hydrangea macrophylla HOM05D000988 ORTHO05D000724 2.1e-08 63.5 134 36.6
GSVIVG01022145001 Vitis vinifera HOM05D000988 ORTHO05D000724 2.1e-08 63.5 201 32.3
THA.LOC104814139 Tarenaya hassleriana HOM05D000988 ORTHO05D000724 3.5e-08 62.8 213 34.7
FAN20G2007 Fragaria x ananassa HOM05D000988 ORTHO05D000724 6.0e-08 62.0 96 47.9
MD05G1077300 Malus domestica HOM05D000988 ORTHO05D000724 6.0e-08 62.0 102 43.1
TWI31G0879 Tripterygium wilfordii HOM05D000988 ORTHO05D000724 6.0e-08 62.0 198 33.8
FAN15G2453 Fragaria x ananassa HOM05D000988 ORTHO05D000724 1.0e-07 61.2 98 45.9
CSS0039823 Camellia sinensis var. sinensis HOM05D000988 ORTHO05D000724 1.3e-07 60.8 158 39.2
CAN.G1041.8 Capsicum annuum HOM05D000988 ORTHO05D000724 1.3e-07 60.8 47 63.8
Duzib147G1455 Durio zibethinus HOM05D000988 ORTHO05D000724 1.3e-07 60.8 100 44.0
GSVIVG01031765001 Vitis vinifera HOM05D000988 ORTHO05D000724 1.3e-07 60.8 193 35.8
FAN27G3463 Fragaria x ananassa HOM05D000988 ORTHO05D000724 1.8e-07 60.5 138 41.3
Gohir.D01G006400 Gossypium hirsutum HOM05D000988 ORTHO05D000724 2.3e-07 60.1 156 37.8
Migut.B00329 Erythranthe guttata HOM05D000988 ORTHO05D000724 3.0e-07 59.7 161 36.6
Rhsim11G0166900 Rhododendron simsii HOM05D000988 ORTHO05D000724 3.0e-07 59.7 158 39.2
CANSAT25G2421 Cannabis sativa HOM05D000988 ORTHO05D000724 3.9e-07 59.3 147 38.1
Nn1g05833 Nelumbo nucifera HOM05D000988 ORTHO05D000724 3.9e-07 59.3 207 31.9
Prupe.8G122300 Prunus persica HOM05D000988 ORTHO05D000724 3.9e-07 59.3 208 33.2
Nitab4.5_0001899g0120 Nicotiana tabacum HOM05D000988 ORTHO05D000724 5.1e-07 58.9 61 55.7
HanXRQChr10g0301741 Helianthus annuus HOM05D000988 ORTHO05D000724 6.7e-07 58.5 109 40.4
RcHm_v2.0_Chr6g0258231 Rosa chinensis HOM05D000988 ORTHO05D000724 6.7e-07 58.5 95 46.3
Atru.chr5.2743 Acer truncatum HOM05D000988 ORTHO05D000724 8.7e-07 58.2 150 36.7
Dinv39865 Davidia involucrata HOM05D000988 ORTHO05D000724 8.7e-07 58.2 155 36.8
HanXRQChr09g0263531 Helianthus annuus HOM05D000988 ORTHO05D000724 8.7e-07 58.2 65 53.8
Sopen01g050830 Solanum pennellii HOM05D000988 ORTHO05D000724 8.7e-07 58.2 47 61.7
FvH4_2g06360 Fragaria vesca HOM05D000988 ORTHO05D000724 1.1e-06 57.8 95 47.4
Gohir.A12G070500 Gossypium hirsutum HOM05D000988 ORTHO05D000724 1.1e-06 57.8 98 40.8
HanXRQChr04g0128271 Helianthus annuus HOM05D000988 ORTHO05D000724 1.1e-06 57.8 60 53.3
Lsat_1_v5_gn_2_84240 Lactuca sativa HOM05D000988 ORTHO05D000724 1.1e-06 57.8 93 44.1
MD10G1092500 Malus domestica HOM05D000988 ORTHO05D000724 1.1e-06 57.8 74 50.0
Oeu007278.1 Olea europaea HOM05D000988 ORTHO05D000724 1.1e-06 57.8 159 37.7
TAR376G0444 Trochodendron aralioides HOM05D000988 ORTHO05D000724 1.1e-06 57.8 195 32.8
Actinidia36500 Actinidia chinensis HOM05D000988 ORTHO05D000724 1.5e-06 57.4 158 38.0
ClCG02G005840 Citrullus lanatus HOM05D000988 ORTHO05D000724 1.5e-06 57.4 204 32.8
Solyc01g108610.3 Solanum lycopersicum HOM05D000988 ORTHO05D000724 1.5e-06 57.4 38 65.8
CSS0009748 Camellia sinensis var. sinensis HOM05D000988 ORTHO05D000724 1.9e-06 57.0 150 37.3
CSS0046552 Camellia sinensis var. sinensis HOM05D000988 ORTHO05D000724 1.9e-06 57.0 150 37.3
COL.COLO4_11396 Corchorus olitorius HOM05D000988 ORTHO05D000724 1.9e-06 57.0 100 42.0
Dinv29977 Davidia involucrata HOM05D000988 ORTHO05D000724 1.9e-06 57.0 156 37.2
Gohir.D12G088300 Gossypium hirsutum HOM05D000988 ORTHO05D000724 1.9e-06 57.0 98 40.8
MD02G1170300 Malus domestica HOM05D000988 ORTHO05D000724 1.9e-06 57.0 205 30.2
Nitab4.5_0002097g0100 Nicotiana tabacum HOM05D000988 ORTHO05D000724 1.9e-06 57.0 37 67.6
HanXRQChr15g0473711 Helianthus annuus HOM05D000988 ORTHO05D000724 2.5e-06 56.6 69 42.0
Lsat_1_v5_gn_7_87161 Lactuca sativa HOM05D000988 ORTHO05D000724 2.5e-06 56.6 206 30.1
MBI06_g24646_MAGBIO Magnolia biondii HOM05D000988 ORTHO05D000724 2.5e-06 56.6 95 44.2
Medtr5g017600 Medicago truncatula HOM05D000988 ORTHO05D000724 2.5e-06 56.6 196 30.6
Oeu013698.1 Olea europaea HOM05D000988 ORTHO05D000724 3.3e-06 56.2 105 38.1
Aa31LG10G4400 Aethionema arabicum HOM05D000988 ORTHO05D000724 4.3e-06 55.8 73 47.9
CsaV3_7G008680 Cucumis sativus L. HOM05D000988 ORTHO05D000724 4.3e-06 55.8 201 32.8
FAN24G0804 Fragaria x ananassa HOM05D000988 ORTHO05D000724 4.3e-06 55.8 201 35.8
Gohir.D10G096200 Gossypium hirsutum HOM05D000988 ORTHO05D000724 4.3e-06 55.8 94 43.6
Gorai.011G105400 Gossypium raimondii HOM05D000988 ORTHO05D000724 4.3e-06 55.8 94 43.6
Gohir.D11G197900 Gossypium hirsutum HOM05D000988 ORTHO05D000724 5.6e-06 55.5 90 42.2
Phvul.003G295400 Phaseolus vulgaris HOM05D000988 ORTHO05D000724 5.6e-06 55.5 194 33.5
QL06p041825 Quercus lobata HOM05D000988 ORTHO05D000724 5.6e-06 55.5 140 37.1
unitig_0.g855 Utricularia gibba HOM05D000988 ORTHO05D000724 5.6e-06 55.5 122 36.1
A06p03560 Brassica napus HOM05D000988 ORTHO05D000724 7.4e-06 55.1 88 42.0
Gorai.007G211800 Gossypium raimondii HOM05D000988 ORTHO05D000724 7.4e-06 55.1 91 41.8
Peaxi162Scf00016g01732 Petunia axillaris HOM05D000988 ORTHO05D000724 7.4e-06 55.1 104 41.3
TAR381G0922 Trochodendron aralioides HOM05D000988 ORTHO05D000724 7.4e-06 55.1 198 34.3
TAR628G0579 Trochodendron aralioides HOM05D000988 ORTHO05D000724 7.4e-06 55.1 198 33.3
GSVIVG01028640001 Vitis vinifera HOM05D000988 ORTHO05D000724 7.4e-06 55.1 166 33.1
Gohir.A10G092200 Gossypium hirsutum HOM05D000988 ORTHO05D000724 9.6e-06 54.7 100 41.0
Gohir.A11G191100 Gossypium hirsutum HOM05D000988 ORTHO05D000724 9.6e-06 54.7 105 35.2
PGSC0003DMG400025821 Solanum tuberosum HOM05D000988 ORTHO05D000724 9.6e-06 54.7 55 56.4


User provided reference genes

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