Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G01434 Eucalyptus grandis HOM05D006107 ORTHO05D007455 0.0e+00 1136.3 572 100.0
PGR042G0079 Punica granatum HOM05D006107 ORTHO05D007455 3.6e-284 981.1 579 85.0
QL11p035424 Quercus lobata HOM05D006107 ORTHO05D007455 1.8e-283 978.8 574 85.2
Sed0010263 Sechium edule HOM05D006107 ORTHO05D007455 2.4e-283 978.4 583 82.8
CsaV3_7G008530 Cucumis sativus L. HOM05D006107 ORTHO05D007455 5.3e-283 977.2 581 82.4
GSVIVG01031728001 Vitis vinifera HOM05D006107 ORTHO05D007455 2.2e-281 971.8 573 83.4
RcHm_v2.0_Chr6g0257681 Rosa chinensis HOM05D006107 ORTHO05D007455 3.8e-281 971.1 572 83.9
Potri.009G100800 Populus trichocarpa HOM05D006107 ORTHO05D007455 1.1e-280 969.5 574 83.4
TWI31G1484 Tripterygium wilfordii HOM05D006107 ORTHO05D007455 3.2e-280 968.0 582 82.5
arahy.Tifrunner.gnm1.ann1.Q9TTL4 Arachis hypogaea HOM05D006107 ORTHO05D007455 5.4e-280 967.2 547 86.8
Prupe.8G126800 Prunus persica HOM05D006107 ORTHO05D007455 5.4e-280 967.2 547 86.7
FAN15G1599 Fragaria x ananassa HOM05D006107 ORTHO05D007455 7.1e-280 966.8 572 84.1
FAN20G2345 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.2e-279 966.1 572 83.9
FvH4_2g05870 Fragaria vesca HOM05D006107 ORTHO05D007455 2.7e-279 964.9 572 83.9
Sabra09G0076700 Salix brachista HOM05D006107 ORTHO05D007455 1.0e-278 963.0 574 82.6
Gohir.A12G023600 Gossypium hirsutum HOM05D006107 ORTHO05D007455 1.8e-278 962.2 580 81.6
Duzib132G0557 Durio zibethinus HOM05D006107 ORTHO05D007455 3.0e-278 961.4 578 81.8
Gohir.D12G024200 Gossypium hirsutum HOM05D006107 ORTHO05D007455 3.0e-278 961.4 580 81.4
Gorai.008G024600 Gossypium raimondii HOM05D006107 ORTHO05D007455 3.0e-278 961.4 580 81.7
Hma1.2p1_0474F.1_g160480 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 3.0e-278 961.4 546 84.4
Atru.chr5.2684 Acer truncatum HOM05D006107 ORTHO05D007455 6.7e-278 960.3 546 85.2
FAN24G1318 Fragaria x ananassa HOM05D006107 ORTHO05D007455 6.7e-278 960.3 572 83.6
MD05G1082300 Malus domestica HOM05D006107 ORTHO05D007455 1.9e-277 958.7 573 82.9
Rhsim05G0085900 Rhododendron simsii HOM05D006107 ORTHO05D007455 1.9e-277 958.7 581 81.2
Thecc.02G102000 Theobroma cacao HOM05D006107 ORTHO05D007455 3.3e-277 958.0 578 81.7
CSS0002619 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 5.6e-277 957.2 547 84.6
CSS0005791 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 2.1e-276 955.3 547 84.5
ClCG02G006000 Citrullus lanatus HOM05D006107 ORTHO05D007455 3.7e-276 954.5 615 77.9
Ciclev10028103m.g Citrus clementina HOM05D006107 ORTHO05D007455 3.7e-276 954.5 546 84.8
Lalb_Chr16g0384781 Lupinus albus HOM05D006107 ORTHO05D007455 1.4e-275 952.6 547 85.0
RcHm_v2.0_Chr6g0257701 Rosa chinensis HOM05D006107 ORTHO05D007455 9.0e-275 949.9 547 84.8
Medtr4g085890 Medicago truncatula HOM05D006107 ORTHO05D007455 8.4e-273 943.3 547 84.8
THA.LOC104807265 Tarenaya hassleriana HOM05D006107 ORTHO05D007455 1.4e-272 942.6 584 78.9
Sc18g0004170 Simmondsia chinensis HOM05D006107 ORTHO05D007455 9.3e-272 939.9 546 82.6
Cfa004529 Carpinus fangiana HOM05D006107 ORTHO05D007455 2.1e-271 938.7 508 90.0
Glyma.07G213500 Glycine max HOM05D006107 ORTHO05D007455 4.6e-271 937.6 525 87.0
arahy.Tifrunner.gnm1.ann1.H5D5IL Arachis hypogaea HOM05D006107 ORTHO05D007455 7.9e-271 936.8 573 81.8
Lj4g0016203 Lotus japonicus HOM05D006107 ORTHO05D007455 7.9e-271 936.8 572 82.5
Haze_10087 Corylus avellana HOM05D006107 ORTHO05D007455 3.0e-270 934.9 572 82.3
MBI03_g13479_MAGBIO Magnolia biondii HOM05D006107 ORTHO05D007455 3.9e-270 934.5 575 79.5
VMungo0251G2128 Vigna mungo HOM05D006107 ORTHO05D007455 3.9e-270 934.5 525 87.2
TPR.G12695 Trifolium pratense HOM05D006107 ORTHO05D007455 5.1e-270 934.1 522 86.6
Psat7g125400 Pisum sativum HOM05D006107 ORTHO05D007455 6.7e-270 933.7 547 83.4
Ca_18695_v3 Cicer arietinum L. HOM05D006107 ORTHO05D007455 8.7e-270 933.3 521 86.6
Glyma.02G131500 Glycine max HOM05D006107 ORTHO05D007455 1.1e-269 932.9 522 87.5
SGA_v2.0_scaffold90G27632 Striga asiatica HOM05D006107 ORTHO05D007455 1.1e-269 932.9 575 80.0
Lj5A210T89 Lonicera japonica HOM05D006107 ORTHO05D007455 1.5e-269 932.6 548 81.8
Phvul.003G291600 Phaseolus vulgaris HOM05D006107 ORTHO05D007455 1.9e-269 932.2 522 87.4
BcaB03g11861 Brassica carinata HOM05D006107 ORTHO05D007455 2.8e-268 928.3 582 78.5
TAR376G0662 Trochodendron aralioides HOM05D006107 ORTHO05D007455 1.1e-267 926.4 572 79.9
Peaxi162Scf00016g01935 Petunia axillaris HOM05D006107 ORTHO05D007455 4.0e-267 924.5 572 79.4
Sp7g31760 Schrenkiella parvula HOM05D006107 ORTHO05D007455 4.0e-267 924.5 588 76.9
AT4G34030 Arabidopsis thaliana HOM05D006107 ORTHO05D007455 6.9e-267 923.7 588 76.7
Aa31LG2G16450 Aethionema arabicum HOM05D006107 ORTHO05D007455 3.4e-266 921.4 547 79.9
Thhalv10024753m.g Eutrema salsugineum HOM05D006107 ORTHO05D007455 3.4e-266 921.4 588 76.7
SalBow6G1673 Salvia bowleyana HOM05D006107 ORTHO05D007455 3.4e-266 921.4 579 79.6
AL7G17360 Arabidopsis lyrata HOM05D006107 ORTHO05D007455 4.5e-266 921.0 547 79.9
BcaC01g00937 Brassica carinata HOM05D006107 ORTHO05D007455 4.5e-266 921.0 585 76.9
A03p62570 Brassica napus HOM05D006107 ORTHO05D007455 5.8e-266 920.6 587 77.2
CANSAT25G2960 Cannabis sativa HOM05D006107 ORTHO05D007455 7.6e-266 920.2 549 81.1
Migut.B00356 Erythranthe guttata HOM05D006107 ORTHO05D007455 1.3e-265 919.5 582 78.0
BolC3t20903H Brassica oleracea HOM05D006107 ORTHO05D007455 2.2e-265 918.7 585 76.8
Carub.0007s0637 Capsella rubella HOM05D006107 ORTHO05D007455 3.8e-265 917.9 588 75.7
C03p86150 Brassica napus HOM05D006107 ORTHO05D007455 4.9e-265 917.5 585 76.6
BraA08t33679Z Brassica rapa HOM05D006107 ORTHO05D007455 4.9e-265 917.5 583 77.0
Aqoxy6G01306 Aquilegia oxysepala HOM05D006107 ORTHO05D007455 8.4e-265 916.8 583 77.0
A08p17180 Brassica napus HOM05D006107 ORTHO05D007455 2.5e-264 915.2 583 76.7
BolC7t46453H Brassica oleracea HOM05D006107 ORTHO05D007455 7.9e-263 910.2 589 76.2
C07p60130 Brassica napus HOM05D006107 ORTHO05D007455 1.3e-262 909.4 589 75.9
COL.COLO4_32644 Corchorus olitorius HOM05D006107 ORTHO05D007455 1.3e-262 909.4 582 78.4
EL10Ac1g02230 Beta vulgaris HOM05D006107 ORTHO05D007455 1.1e-261 906.4 548 80.7
PSO675G2583 Papaver somniferum HOM05D006107 ORTHO05D007455 1.9e-261 905.6 541 80.4
vmacro19505 Vaccinium macrocarpon HOM05D006107 ORTHO05D007455 3.3e-261 904.8 684 68.7
HPP92_004071 Vanilla planifolia HOM05D006107 ORTHO05D007455 2.2e-260 902.1 557 78.1
Hund06173 Selenicereus undatus HOM05D006107 ORTHO05D007455 2.8e-260 901.7 548 80.3
Cc02_g18880 Coffea canephora HOM05D006107 ORTHO05D007455 6.3e-260 900.6 521 83.1
CAN.G1041.37 Capsicum annuum HOM05D006107 ORTHO05D007455 1.4e-259 899.4 574 77.7
ECA236G2832 Erigeron canadensis HOM05D006107 ORTHO05D007455 1.8e-259 899.0 561 77.2
PSO541G4551 Papaver somniferum HOM05D006107 ORTHO05D007455 1.8e-259 899.0 541 80.2
Sopen01g050230 Solanum pennellii HOM05D006107 ORTHO05D007455 4.1e-259 897.9 546 79.5
Lsat_1_v5_gn_7_86820 Lactuca sativa HOM05D006107 ORTHO05D007455 2.0e-258 895.6 546 78.4
Nitab4.5_0018866g0010 Nicotiana tabacum HOM05D006107 ORTHO05D007455 1.0e-257 893.3 586 76.6
Solyc01g108030.4 Solanum lycopersicum HOM05D006107 ORTHO05D007455 1.3e-257 892.9 575 76.9
HanXRQChr11g0331361 Helianthus annuus HOM05D006107 ORTHO05D007455 5.5e-256 887.5 548 76.8
AUR62035403 Chenopodium quinoa HOM05D006107 ORTHO05D007455 9.4e-256 886.7 575 76.0
DCAR_001629 Daucus carota HOM05D006107 ORTHO05D007455 1.2e-255 886.3 524 81.7
PGSC0003DMG400025888 Solanum tuberosum HOM05D006107 ORTHO05D007455 6.7e-254 880.6 521 81.4
Zm00001eb179170 Zea mays HOM05D006107 ORTHO05D007455 6.7e-254 880.6 564 76.6
ATR1126G046 Amborella trichopoda HOM05D006107 ORTHO05D007455 1.1e-251 873.2 567 77.1
Dinv42164 Davidia involucrata HOM05D006107 ORTHO05D007455 1.2e-250 869.8 542 79.5
BcaNung03357 Brassica carinata HOM05D006107 ORTHO05D007455 7.2e-248 860.5 589 73.2
Nitab4.5_0001428g0130 Nicotiana tabacum HOM05D006107 ORTHO05D007455 7.2e-248 860.5 573 75.4
CDE10G1185 Ceratophyllum demersum HOM05D006107 ORTHO05D007455 1.0e-246 856.7 545 76.0
unitig_21.g20740 Utricularia gibba HOM05D006107 ORTHO05D007455 8.5e-241 837.0 571 74.1
FAN27G3033 Fragaria x ananassa HOM05D006107 ORTHO05D007455 2.1e-239 832.4 518 79.7
Oeu007292.2 Olea europaea HOM05D006107 ORTHO05D007455 8.8e-238 827.0 469 84.0
CARHR242170 Cardamine hirsuta HOM05D006107 ORTHO05D007455 1.5e-237 826.2 468 83.3
MELO3C018456.2 Cucumis melo HOM05D006107 ORTHO05D007455 7.4e-237 823.9 500 81.6
Nn5g30280 Nelumbo nucifera HOM05D006107 ORTHO05D007455 7.4e-237 823.9 468 85.3
Pp3c3_22750 Physcomitrium patens HOM05D006107 ORTHO05D007455 9.7e-237 823.5 540 73.5
CiPaw.05G007100 Carya illinoinensis HOM05D006107 ORTHO05D007455 3.7e-236 821.6 439 90.9
Cpa.g.sc62.2 Carica papaya HOM05D006107 ORTHO05D007455 1.1e-235 820.1 489 83.2
Mapoly0009s0150 Marchantia polymorpha HOM05D006107 ORTHO05D007455 1.0e-233 813.5 542 72.9
Manes.07G078100 Manihot esculenta HOM05D006107 ORTHO05D007455 9.4e-232 807.0 443 89.4
AagrBONN_evm.TU.Sc2ySwM_368.3420 Anthoceros agrestis HOM05D006107 ORTHO05D007455 8.8e-230 800.4 541 71.0
SEGI_09747 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 4.0e-222 775.0 470 80.0
HPP92_004116 Vanilla planifolia HOM05D006107 ORTHO05D007455 2.2e-220 769.2 571 68.0
SMO174G0062 Selaginella moellendorffii HOM05D006107 ORTHO05D007455 2.3e-201 706.1 540 65.2
AUR62041887 Chenopodium quinoa HOM05D006107 ORTHO05D007455 1.0e-193 680.6 464 72.8
Cre03.g181200 Chlamydomonas reinhardtii HOM05D006107 ORTHO05D007455 6.6e-193 677.9 551 60.4
Actinidia17868 Actinidia chinensis HOM05D006107 ORTHO05D007455 1.7e-180 636.7 580 60.3
PRCOL_00006414 Prasinoderma coloniale HOM05D006107 ORTHO05D007455 4.2e-171 605.5 527 57.3
Haze_26655 Corylus avellana HOM05D006107 ORTHO05D007455 7.8e-170 601.3 565 54.2
Haze_27116 Corylus avellana HOM05D006107 ORTHO05D007455 7.1e-155 551.6 447 60.9
Haze_27030 Corylus avellana HOM05D006107 ORTHO05D007455 1.3e-148 530.8 513 54.0
Ah.00g000150 Amaranthus hybridus HOM05D006107 ORTHO05D007455 2.3e-145 520.0 332 77.1
Hma1.2p1_0474F.1_g160470 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 1.2e-122 444.5 259 82.2
Haze_26656 Corylus avellana HOM05D006107 ORTHO05D007455 2.0e-85 320.9 254 59.8
QL11p035444 Quercus lobata HOM05D006107 ORTHO05D007455 4.6e-77 293.1 158 87.3
CBR_g54985 Chara braunii HOM05D006107 ORTHO05D007455 1.0e-52 212.2 504 29.2
Medtr3g011860 Medicago truncatula HOM05D006107 ORTHO05D007455 2.5e-43 181.0 208 50.5
QL11p035447 Quercus lobata HOM05D006107 ORTHO05D007455 5.7e-35 153.3 90 85.6
Cfa025742 Carpinus fangiana HOM05D006107 ORTHO05D007455 1.1e-30 139.0 537 25.1
QL11p035449 Quercus lobata HOM05D006107 ORTHO05D007455 1.5e-24 118.6 65 84.6
CARHR242160 Cardamine hirsuta HOM05D006107 ORTHO05D007455 6.7e-20 103.2 122 50.8
SEGI_09117 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 3.4e-16 90.9 79 58.2
CDE05G3043 Ceratophyllum demersum HOM05D003397 ORTHO05D004390 4.1e-09 67.4 373 24.1
MCO15G166 Micromonas commoda HOM05D003397 ORTHO05D004390 2.9e-07 61.2 432 22.5
Solyc01g108060.2 Solanum lycopersicum HOM05D006107 ORTHO05D007455 2.9e-07 61.2 30 93.3


User provided reference genes

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