Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G01397 Eucalyptus grandis HOM05D002915 ORTHO05D003004 3.4e-70 268.1 122 100.0
Eucgr.K00814 Eucalyptus grandis HOM05D002915 ORTHO05D003004 1.2e-46 189.9 123 69.9
Eucgr.G01570 Eucalyptus grandis HOM05D002915 ORTHO05D003004 7.5e-46 187.2 116 74.1
Eucgr.G01391 Eucalyptus grandis HOM05D002915 ORTHO05D003004 4.3e-33 144.8 100 66.0
Eucgr.G01392 Eucalyptus grandis HOM05D002915 ORTHO05D003004 1.2e-27 126.7 72 83.3
Thecc.03G155800 Theobroma cacao HOM05D002915 ORTHO05D003004 6.0e-11 71.2 104 37.5
Hund03449 Selenicereus undatus HOM05D002915 ORTHO05D003004 8.7e-10 67.4 125 34.4
Hma1.2p1_0167F.1_g073810 Hydrangea macrophylla HOM05D002915 ORTHO05D003004 4.3e-09 65.1 121 34.7
Manes.12G014800 Manihot esculenta HOM05D002915 ORTHO05D003004 2.1e-08 62.8 142 31.0
CSS0045033 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 4.8e-08 61.6 108 33.3
Lj4g0001673 Lotus japonicus HOM05D002915 ORTHO05D003004 4.8e-08 61.6 122 32.0
Sopen06g010910 Solanum pennellii HOM05D000025 ORTHO05D000136 1.1e-07 60.5 116 30.2
Haze_24934 Corylus avellana HOM05D002915 ORTHO05D003004 1.8e-07 59.7 86 38.4
CiPaw.05G115300 Carya illinoinensis HOM05D002915 ORTHO05D003004 2.4e-07 59.3 128 29.7
CiPaw.05G115400 Carya illinoinensis HOM05D002915 ORTHO05D003004 2.4e-07 59.3 128 29.7
Lj4g0002182 Lotus japonicus HOM05D002915 ORTHO05D003004 2.4e-07 59.3 119 31.1
CAN.G1143.27 Capsicum annuum HOM05D002915 ORTHO05D003004 3.1e-07 58.9 126 29.4
DCAR_016182 Daucus carota HOM05D002915 ORTHO05D003004 3.1e-07 58.9 113 29.2
DCAR_018111 Daucus carota HOM05D002915 ORTHO05D003004 4.0e-07 58.5 114 30.7
Potri.013G008800 Populus trichocarpa HOM05D002915 ORTHO05D003004 4.0e-07 58.5 127 33.1
Manes.12G023850 Manihot esculenta HOM05D002915 ORTHO05D003004 5.3e-07 58.2 143 28.7
Phvul.003G180400 Phaseolus vulgaris HOM05D002915 ORTHO05D003004 5.3e-07 58.2 132 31.8
Cc02_g04260 Coffea canephora HOM05D002915 ORTHO05D003004 9.0e-07 57.4 114 33.3
Cfa002665 Carpinus fangiana HOM05D002915 ORTHO05D003004 1.2e-06 57.0 86 37.2
CSS0049349 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 1.5e-06 56.6 108 31.5
CiPaw.06G099700 Carya illinoinensis HOM05D002915 ORTHO05D003004 1.5e-06 56.6 125 31.2
Aqoxy1G01229 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 2.6e-06 55.8 117 29.9
CiPaw.05G115500 Carya illinoinensis HOM05D002915 ORTHO05D003004 2.6e-06 55.8 128 28.9
QL03p054762 Quercus lobata HOM05D002915 ORTHO05D003004 3.4e-06 55.5 126 31.7
AT1G74875 Arabidopsis thaliana HOM05D002915 ORTHO05D003004 4.5e-06 55.1 127 29.1
Cc05_g03590 Coffea canephora HOM05D002915 ORTHO05D003004 5.8e-06 54.7 114 30.7
Manes.13G015600 Manihot esculenta HOM05D002915 ORTHO05D003004 7.6e-06 54.3 72 38.9
vmacro16134 Vaccinium macrocarpon HOM05D002915 ORTHO05D003004 7.6e-06 54.3 110 32.7
Rhsim02G0221300 Rhododendron simsii HOM05D002915 ORTHO05D003004 1.0e-05 53.9 113 31.9


User provided reference genes

Program Settings