Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G01391 Eucalyptus grandis HOM05D002915 ORTHO05D003004 3.3e-103 378.3 173 100.0
Eucgr.G01570 Eucalyptus grandis HOM05D002915 ORTHO05D003004 2.4e-61 239.2 151 72.8
Eucgr.G01392 Eucalyptus grandis HOM05D002915 ORTHO05D003004 5.3e-45 184.9 123 74.8
Eucgr.G01397 Eucalyptus grandis HOM05D002915 ORTHO05D003004 6.1e-33 144.8 100 66.0
Eucgr.K00814 Eucalyptus grandis HOM05D002915 ORTHO05D003004 8.5e-27 124.4 101 59.4
Rhsim12G0105300 Rhododendron simsii HOM05D002915 ORTHO05D003004 6.3e-14 81.6 157 31.2
Gorai.007G046700 Gossypium raimondii HOM05D002915 ORTHO05D003004 8.3e-14 81.3 155 31.0
Gohir.D11G043350 Gossypium hirsutum HOM05D002915 ORTHO05D003004 1.4e-13 80.5 155 31.0
Hma1.2p1_0167F.1_g073810 Hydrangea macrophylla HOM05D002915 ORTHO05D003004 1.8e-13 80.1 167 29.3
Rhsim02G0221300 Rhododendron simsii HOM05D002915 ORTHO05D003004 2.4e-13 79.7 157 31.2
Rhsim13G0213700 Rhododendron simsii HOM05D002915 ORTHO05D003004 2.4e-13 79.7 154 31.8
Eucgr.H01273 Eucalyptus grandis HOM05D002915 ORTHO05D003004 1.2e-12 77.4 67 59.7
FAN19G1392 Fragaria x ananassa HOM05D002915 ORTHO05D003004 1.2e-12 77.4 161 29.8
Lj1g0028201 Lotus japonicus HOM05D002915 ORTHO05D003004 1.2e-12 77.4 161 30.4
Lj4g0025234 Lotus japonicus HOM05D002915 ORTHO05D003004 1.6e-12 77.0 167 30.5
FAN23G0131 Fragaria x ananassa HOM05D002915 ORTHO05D003004 2.7e-12 76.3 156 28.8
Lalb_Chr10g0105601 Lupinus albus HOM05D002915 ORTHO05D003004 2.7e-12 76.3 157 30.6
Rhsim12G0105400 Rhododendron simsii HOM05D002915 ORTHO05D003004 2.7e-12 76.3 154 31.2
CiPaw.05G115500 Carya illinoinensis HOM05D002915 ORTHO05D003004 3.5e-12 75.9 173 28.9
Gohir.A11G040100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 7.7e-12 74.7 149 28.9
CSS0045033 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 1.0e-11 74.3 153 28.8
CiPaw.05G115300 Carya illinoinensis HOM05D002915 ORTHO05D003004 1.0e-11 74.3 173 30.1
CiPaw.05G115400 Carya illinoinensis HOM05D002915 ORTHO05D003004 1.0e-11 74.3 173 30.1
Cc02_g04260 Coffea canephora HOM05D002915 ORTHO05D003004 1.0e-11 74.3 152 30.3
Manes.13G015600 Manihot esculenta HOM05D002915 ORTHO05D003004 1.7e-11 73.6 179 25.7
RcHm_v2.0_Chr4g0422141 Rosa chinensis HOM05D002915 ORTHO05D003004 2.9e-11 72.8 158 27.2
Haze_24934 Corylus avellana HOM05D002915 ORTHO05D003004 3.8e-11 72.4 144 27.8
Manes.12G014800 Manihot esculenta HOM05D002915 ORTHO05D003004 3.8e-11 72.4 179 29.1
Lj4g0001673 Lotus japonicus HOM05D002915 ORTHO05D003004 6.5e-11 71.6 131 29.8
FAN26G0404 Fragaria x ananassa HOM05D002915 ORTHO05D003004 8.5e-11 71.2 161 27.3
FAN28G1700 Fragaria x ananassa HOM05D002915 ORTHO05D003004 8.5e-11 71.2 140 27.1
FAN28G2009 Fragaria x ananassa HOM05D002915 ORTHO05D003004 8.5e-11 71.2 140 27.1
FAN28G2017 Fragaria x ananassa HOM05D002915 ORTHO05D003004 8.5e-11 71.2 140 27.1
Manes.12G023850 Manihot esculenta HOM05D002915 ORTHO05D003004 8.5e-11 71.2 149 29.5
Manes.11G084185 Manihot esculenta HOM05D002915 ORTHO05D003004 1.1e-10 70.9 130 30.0
Actinidia25760 Actinidia chinensis HOM05D002915 ORTHO05D003004 1.5e-10 70.5 144 29.2
Dinv14798 Davidia involucrata HOM05D002915 ORTHO05D003004 1.5e-10 70.5 127 29.9
Sopen06g010910 Solanum pennellii HOM05D000025 ORTHO05D000136 1.5e-10 70.5 161 28.0
Lj1g0003622 Lotus japonicus HOM05D002915 ORTHO05D003004 2.5e-10 69.7 168 30.4
vmacro16134 Vaccinium macrocarpon HOM05D002915 ORTHO05D003004 2.5e-10 69.7 154 26.6
Lj3g0023229 Lotus japonicus HOM05D002915 ORTHO05D003004 3.2e-10 69.3 171 29.2
CiPaw.06G099700 Carya illinoinensis HOM05D002915 ORTHO05D003004 4.2e-10 68.9 168 31.0
Oeu033490.1 Olea europaea HOM05D002915 ORTHO05D003004 5.5e-10 68.6 154 29.2
AT1G74875 Arabidopsis thaliana HOM05D002915 ORTHO05D003004 7.2e-10 68.2 154 29.2
Lj2g0026934 Lotus japonicus HOM05D002915 ORTHO05D003004 7.2e-10 68.2 140 30.0
Prupe.1G137300 Prunus persica HOM05D002915 ORTHO05D003004 7.2e-10 68.2 132 33.3
QL03p054762 Quercus lobata HOM05D002915 ORTHO05D003004 7.2e-10 68.2 156 29.5
PGR142G3351 Punica granatum HOM05D002915 ORTHO05D003004 1.2e-09 67.4 162 28.4
HanXRQChr05g0131161 Helianthus annuus HOM05D002915 ORTHO05D003004 2.1e-09 66.6 156 29.5
PGSC0003DMG400043813 Solanum tuberosum HOM05D002915 ORTHO05D003004 2.1e-09 66.6 160 28.8
CAN.G1143.27 Capsicum annuum HOM05D002915 ORTHO05D003004 2.7e-09 66.2 168 27.4
Cfa002665 Carpinus fangiana HOM05D002915 ORTHO05D003004 2.7e-09 66.2 143 25.2
DCAR_018110 Daucus carota HOM05D002915 ORTHO05D003004 2.7e-09 66.2 161 28.0
Lj4g0014849 Lotus japonicus HOM05D002915 ORTHO05D003004 3.6e-09 65.9 147 30.6
Lj6g0019512 Lotus japonicus HOM05D002915 ORTHO05D003004 6.1e-09 65.1 161 28.6
Lalb_Chr18g0050831 Lupinus albus HOM05D002915 ORTHO05D003004 6.1e-09 65.1 145 29.7
TAR629G0865 Trochodendron aralioides HOM05D002915 ORTHO05D003004 6.1e-09 65.1 125 29.6
Lj6g0013707 Lotus japonicus HOM05D002915 ORTHO05D003004 8.0e-09 64.7 150 28.0
PGSC0003DMG400021580 Solanum tuberosum HOM05D002915 ORTHO05D003004 1.0e-08 64.3 161 26.1
Ciclev10006753m.g Citrus clementina HOM05D002915 ORTHO05D003004 1.4e-08 63.9 147 29.9
DCAR_016182 Daucus carota HOM05D002915 ORTHO05D003004 1.4e-08 63.9 137 28.5
Lj4g0002182 Lotus japonicus HOM05D002915 ORTHO05D003004 1.4e-08 63.9 160 28.1
Aqoxy1G01229 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 1.8e-08 63.5 153 25.5
MD16G1169500 Malus domestica HOM05D002915 ORTHO05D003004 1.8e-08 63.5 154 30.5
Phvul.003G180500 Phaseolus vulgaris HOM05D002915 ORTHO05D003004 2.3e-08 63.2 139 31.7
MD16G1170100 Malus domestica HOM05D002915 ORTHO05D003004 3.0e-08 62.8 154 30.5
PSO339G6727 Papaver somniferum HOM05D002915 ORTHO05D003004 3.0e-08 62.8 186 21.5
CANSAT64G2697 Cannabis sativa HOM05D002915 ORTHO05D003004 4.0e-08 62.4 165 26.7
Lj2g0021070 Lotus japonicus HOM05D002915 ORTHO05D003004 4.0e-08 62.4 138 31.2
PGSC0003DMG400037269 Solanum tuberosum HOM05D002915 ORTHO05D003004 4.0e-08 62.4 163 27.6
FAN17G1773 Fragaria x ananassa HOM05D002915 ORTHO05D003004 5.2e-08 62.0 167 26.3
PSO384G2811 Papaver somniferum HOM05D002915 ORTHO05D003004 6.8e-08 61.6 160 25.0
PSO384G3355 Papaver somniferum HOM05D002915 ORTHO05D003004 6.8e-08 61.6 160 25.0
Lsat_1_v5_gn_8_150181 Lactuca sativa HOM05D000825 ORTHO05D003684 8.8e-08 61.2 110 26.4
Potri.013G008800 Populus trichocarpa HOM05D002915 ORTHO05D003004 8.8e-08 61.2 155 27.1
Sopen04g019620 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-08 61.2 161 27.3
TAR629G0058 Trochodendron aralioides HOM05D002915 ORTHO05D003004 8.8e-08 61.2 117 28.2
FAN12G2317 Fragaria x ananassa HOM05D002915 ORTHO05D003004 1.2e-07 60.8 162 25.9
Sp5g30010 Schrenkiella parvula HOM05D002915 ORTHO05D003004 1.2e-07 60.8 152 28.9
TAR629G2135 Trochodendron aralioides HOM05D002915 ORTHO05D003004 1.5e-07 60.5 153 28.8
COL.COLO4_36468 Corchorus olitorius HOM05D002915 ORTHO05D003004 2.0e-07 60.1 136 30.1
A07p34150 Brassica napus HOM05D002915 ORTHO05D003004 4.4e-07 58.9 106 34.0
Lj2g0014982 Lotus japonicus HOM05D002915 ORTHO05D003004 4.4e-07 58.9 141 29.1
arahy.Tifrunner.gnm1.ann1.JTPM3R Arachis hypogaea HOM05D000176 ORTHO05D000106 5.7e-07 58.5 130 30.8
Thecc.09G039200 Theobroma cacao HOM05D002915 ORTHO05D003004 7.5e-07 58.2 132 27.3
Lj6g0021938 Lotus japonicus HOM05D002915 ORTHO05D003004 9.8e-07 57.8 110 30.9
TPR.G23884 Trifolium pratense HOM05D002915 ORTHO05D003004 9.8e-07 57.8 157 27.4
BolC6t39177H Brassica oleracea HOM05D002915 ORTHO05D003004 1.3e-06 57.4 106 34.0
Thhalv10019573m.g Eutrema salsugineum HOM05D002915 ORTHO05D003004 2.2e-06 56.6 97 34.0
Gohir.A05G169100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 2.2e-06 56.6 138 26.8
Psat4g025920 Pisum sativum HOM05D002915 ORTHO05D003004 2.2e-06 56.6 168 28.0
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 2.8e-06 56.2 106 34.0
Gohir.D05G172300 Gossypium hirsutum HOM05D002915 ORTHO05D003004 2.8e-06 56.2 138 26.8
Lj3g0026757 Lotus japonicus HOM05D002915 ORTHO05D003004 2.8e-06 56.2 133 27.1
BcaC08g46172 Brassica carinata HOM05D002915 ORTHO05D003004 4.9e-06 55.5 106 33.0
Gorai.009G177500 Gossypium raimondii HOM05D002915 ORTHO05D003004 4.9e-06 55.5 138 26.8
C06p42620 Brassica napus HOM05D002915 ORTHO05D003004 6.3e-06 55.1 106 33.0
Thecc.03G155800 Theobroma cacao HOM05D002915 ORTHO05D003004 6.3e-06 55.1 94 33.0
Aqoxy4G02244 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 8.3e-06 54.7 85 32.9
Ca_21504_v3 Cicer arietinum L. HOM05D002915 ORTHO05D003004 8.3e-06 54.7 151 25.8
Gorai.006G126100 Gossypium raimondii HOM05D002915 ORTHO05D003004 8.3e-06 54.7 142 26.8
Lj3g0011377 Lotus japonicus HOM05D002915 ORTHO05D003004 8.3e-06 54.7 162 25.9
TWI09G1418 Tripterygium wilfordii HOM05D002915 ORTHO05D003004 8.3e-06 54.7 87 32.2


User provided reference genes

Program Settings