Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 1.4e-162 576.2 305 100.0
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 2.5e-53 213.4 282 52.5
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 3.0e-51 206.5 285 52.3
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 8.7e-51 204.9 285 51.9
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.9e-50 203.8 285 51.6
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 1.1e-48 198.0 280 48.6
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 1.8e-48 197.2 285 48.1
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 4.1e-48 196.1 280 52.5
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 5.9e-47 192.2 278 50.4
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 1.3e-46 191.0 281 48.8
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 2.9e-46 189.9 283 47.3
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 3.8e-46 189.5 281 49.5
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 8.5e-46 188.3 282 47.5
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 1.9e-45 187.2 279 48.7
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 9.3e-45 184.9 277 48.4
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 1.2e-44 184.5 337 43.3
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 1.0e-43 181.4 280 49.6
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 1.8e-43 180.6 281 48.0
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 3.0e-43 179.9 276 49.3
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 6.7e-43 178.7 275 48.0
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 1.5e-42 177.6 293 48.8
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 1.3e-41 174.5 283 48.4
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 1.7e-41 174.1 273 45.8
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 4.8e-41 172.6 297 44.8
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 1.0e-38 164.9 280 44.6
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 1.3e-38 164.5 257 49.0
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 2.2e-38 163.7 254 47.2
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 6.5e-38 162.2 286 42.3
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 1.9e-37 160.6 273 42.5
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 1.6e-36 157.5 298 44.6
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 4.6e-36 156.0 293 45.7
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 3.0e-35 153.3 295 41.7
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 3.9e-35 152.9 315 38.4
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 2.0e-34 150.6 291 42.6
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 1.3e-33 147.9 274 43.1
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 3.7e-33 146.4 257 42.8
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 1.1e-32 144.8 291 44.3
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 1.1e-32 144.8 284 41.2
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 1.4e-32 144.4 251 43.0
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 2.0e-31 140.6 295 42.4
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 2.6e-31 140.2 334 39.8
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.3e-30 137.9 269 43.9
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 6.5e-30 135.6 280 41.4
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.5e-29 133.7 283 42.8
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.5e-29 133.7 283 42.8
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 2.5e-29 133.7 285 41.4
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 3.2e-29 133.3 293 42.0
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 9.4e-29 131.7 284 42.6
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 1.6e-28 131.0 284 40.8
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 1.8e-27 127.5 316 36.7
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 7.4e-26 122.1 264 38.3
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 6.3e-25 119.0 277 38.6
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 4.1e-24 116.3 265 42.6
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 4.1e-24 116.3 285 35.8
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 7.0e-24 115.5 268 39.6
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 4.5e-23 112.8 284 39.8
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 5.9e-23 112.5 277 37.9
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 1.0e-22 111.7 264 38.3
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 1.0e-22 111.7 270 37.4
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 1.7e-22 110.9 264 37.1
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 2.2e-22 110.5 319 33.9
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 5.0e-22 109.4 261 34.9
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 6.5e-22 109.0 278 38.8
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 2.5e-21 107.1 240 40.0
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 8.8e-19 98.6 278 35.3
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 4.4e-18 96.3 300 34.0
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 4.4e-18 96.3 272 36.0
Oeu037282.1 Olea europaea HOM05D006273 ORTHO05D007607 1.3e-17 94.7 239 37.2
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 3.7e-17 93.2 289 35.6
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 4.8e-17 92.8 293 34.5
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 6.3e-17 92.4 252 33.7
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 1.1e-16 91.7 282 36.5
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 1.4e-16 91.3 310 34.2
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 1.8e-16 90.9 280 36.4
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 2.4e-16 90.5 172 40.1
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 2.4e-16 90.5 302 34.4
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 3.1e-16 90.1 267 36.7
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 5.3e-16 89.4 285 34.4
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 7.0e-16 89.0 252 35.3
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 9.1e-16 88.6 287 35.5
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 2.0e-15 87.4 282 35.5
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 3.5e-15 86.7 242 35.5
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 7.7e-15 85.5 341 30.8
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 1.7e-14 84.3 300 31.0
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 2.9e-14 83.6 307 31.6
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 6.5e-14 82.4 271 35.4
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 6.5e-14 82.4 273 34.4
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 1.5e-13 81.3 277 35.7
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 1.5e-13 81.3 274 31.4
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 3.2e-13 80.1 279 32.3
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 9.4e-13 78.6 271 34.7
FvH4_2g03741 Fragaria vesca HOM05D006273 ORTHO05D007607 2.7e-12 77.0 117 51.3
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 6.1e-12 75.9 268 34.7
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 1.0e-11 75.1 263 35.0
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 1.8e-11 74.3 283 33.2
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 1.8e-11 74.3 281 34.2
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 4.4e-10 69.7 274 30.3
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 4.4e-10 69.7 276 30.8
AT3G19650 Arabidopsis thaliana HOM05D006273 ORTHO05D007607 7.5e-10 68.9 277 31.8
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 7.5e-10 68.9 266 33.5
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 1.3e-09 68.2 267 31.1
Zm00001eb007690 Zea mays HOM05D006273 ORTHO05D007607 4.1e-08 63.2 288 30.6
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 2.7e-07 60.5 178 33.1
TPR.G8308 Trifolium pratense HOM05D006273 ORTHO05D007607 4.5e-07 59.7 268 32.5
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 1.3e-06 58.2 270 31.1


User provided reference genes

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