Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 3.5e-65 251.5 132 100.0
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 4.1e-37 158.3 134 67.2
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 1.7e-35 152.9 136 67.6
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 1.4e-34 149.8 136 64.0
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 4.2e-34 148.3 145 61.4
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 7.2e-34 147.5 137 64.2
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 2.7e-33 145.6 148 60.1
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 1.0e-32 143.7 144 59.0
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 1.3e-32 143.3 135 62.2
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 1.3e-32 143.3 135 63.0
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 1.8e-32 142.9 141 61.0
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 2.3e-32 142.5 147 58.5
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 3.0e-32 142.1 136 59.6
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 3.9e-32 141.7 135 62.2
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 8.7e-32 140.6 135 61.5
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 1.5e-31 139.8 146 58.2
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 1.5e-31 139.8 136 61.0
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 1.9e-31 139.4 135 60.0
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 3.3e-31 138.7 134 60.4
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 7.4e-31 137.5 147 57.8
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 9.7e-31 137.1 138 58.7
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 2.8e-30 135.6 132 59.1
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 3.7e-30 135.2 135 59.3
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 8.2e-30 134.0 129 59.7
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 1.1e-29 133.7 135 60.0
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 1.4e-29 133.3 140 57.1
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 2.4e-29 132.5 138 57.2
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 3.1e-29 132.1 129 58.9
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 5.3e-29 131.3 138 58.0
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 5.3e-29 131.3 136 58.1
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 2.0e-28 129.4 133 57.1
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 2.0e-28 129.4 126 60.3
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 2.6e-28 129.0 133 52.6
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 2.6e-28 129.0 133 52.6
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 4.5e-28 128.3 128 57.0
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 4.5e-28 128.3 135 58.5
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 5.9e-28 127.9 138 55.8
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 5.9e-28 127.9 134 56.0
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 5.9e-28 127.9 133 56.4
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 2.2e-27 125.9 133 56.4
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 2.2e-27 125.9 133 56.4
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 2.9e-27 125.6 133 56.4
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 3.8e-27 125.2 121 62.8
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 1.1e-26 123.6 133 54.9
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 1.1e-26 123.6 125 55.2
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 1.4e-26 123.2 133 54.9
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 3.2e-26 122.1 126 60.3
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 3.2e-26 122.1 138 55.1
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 5.5e-26 121.3 84 76.2
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 1.2e-25 120.2 177 46.3
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 2.7e-25 119.0 128 52.3
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 3.6e-25 118.6 127 59.1
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 1.4e-24 116.7 128 54.7
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 6.7e-24 114.4 126 56.3
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 8.8e-24 114.0 125 56.0
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 1.1e-23 113.6 93 64.5
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 1.5e-23 113.2 124 56.5
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.3e-23 112.1 140 52.9
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 3.3e-23 112.1 91 70.3
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 4.4e-23 111.7 136 53.7
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 2.2e-22 109.4 76 67.1
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 2.2e-22 109.4 76 67.1
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 2.8e-22 109.0 76 69.7
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 3.7e-22 108.6 128 53.1
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 3.7e-22 108.6 75 68.0
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 4.8e-22 108.2 132 53.8
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 6.3e-22 107.8 162 45.1
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 8.2e-22 107.5 125 52.0
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 5.3e-21 104.8 127 51.2
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 5.3e-21 104.8 129 51.9
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 6.9e-21 104.4 129 53.5
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 9.1e-21 104.0 87 63.2
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 2.6e-20 102.4 134 47.0
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 4.5e-20 101.7 86 60.5
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 5.9e-20 101.3 68 75.0
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 1.0e-19 100.5 65 76.9
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.7e-19 99.8 84 59.5
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 2.2e-19 99.4 129 49.6
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 2.2e-19 99.4 73 68.5
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 2.2e-19 99.4 81 65.4
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 2.2e-19 99.4 81 65.4
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 3.8e-19 98.6 133 47.4
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 6.5e-19 97.8 60 78.3
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 6.5e-19 97.8 124 46.0
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 8.5e-19 97.4 132 47.0
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 1.1e-18 97.1 84 61.9
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 3.2e-18 95.5 70 65.7
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 7.2e-18 94.4 88 61.4
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 2.3e-16 89.4 88 56.8
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 3.0e-16 89.0 76 59.2
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 5.2e-16 88.2 63 66.7
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 1.7e-14 83.2 159 38.4
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 1.8e-13 79.7 58 69.0
Manes.07G054000 Manihot esculenta HOM05D007571 ORTHO05D009439 7.7e-12 74.3 92 56.5
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 2.5e-10 69.3 65 50.8
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 9.4e-10 67.4 63 54.0
Aa31LG10G4150 Aethionema arabicum HOM05D007571 ORTHO05D009439 4.7e-09 65.1 90 43.3
Potri.009G086400 Populus trichocarpa HOM05D007571 ORTHO05D009439 4.7e-09 65.1 87 54.0
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 2.3e-08 62.8 46 67.4


User provided reference genes

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