Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G00971 Eucalyptus grandis HOM05D006980 ORTHO05D008704 2.6e-151 539.7 270 100.0
Eucgr.G00972 Eucalyptus grandis HOM05D006980 ORTHO05D008704 8.1e-92 342.0 213 81.2
Eucgr.G00976 Eucalyptus grandis HOM05D006980 ORTHO05D008704 8.7e-78 295.4 219 73.1
Prupe.7G109800 Prunus persica HOM05D006980 ORTHO05D008704 1.7e-65 254.6 215 61.4
Cfa016610 Carpinus fangiana HOM05D006980 ORTHO05D008704 2.1e-63 247.7 214 58.9
QL07p038724 Quercus lobata HOM05D006980 ORTHO05D008704 2.7e-63 247.3 165 70.3
PGR142G3286 Punica granatum HOM05D006980 ORTHO05D008704 1.0e-62 245.4 220 58.6
CiPaw.09G014400 Carya illinoinensis HOM05D006980 ORTHO05D008704 1.8e-62 244.6 222 57.7
Potri.006G068700 Populus trichocarpa HOM05D006980 ORTHO05D008704 1.9e-61 241.1 224 56.2
CANSAT64G1568 Cannabis sativa HOM05D006980 ORTHO05D008704 2.5e-61 240.7 222 56.3
RcHm_v2.0_Chr3g0473791 Rosa chinensis HOM05D006980 ORTHO05D008704 1.1e-59 235.3 215 56.3
QL07p038975 Quercus lobata HOM05D006980 ORTHO05D008704 1.4e-59 235.0 165 67.3
Manes.09G055100 Manihot esculenta HOM05D006980 ORTHO05D008704 5.3e-59 233.0 178 62.9
CsaV3_6G007180 Cucumis sativus L. HOM05D006980 ORTHO05D008704 4.5e-58 229.9 216 56.9
FAN05G0999 Fragaria x ananassa HOM05D006980 ORTHO05D008704 5.9e-58 229.6 219 55.7
Sed0006527 Sechium edule HOM05D006980 ORTHO05D008704 1.7e-57 228.0 211 58.3
COL.COLO4_29731 Corchorus olitorius HOM05D006980 ORTHO05D008704 2.9e-57 227.3 214 57.5
Dinv21206 Davidia involucrata HOM05D006980 ORTHO05D008704 5.0e-57 226.5 210 54.3
Thecc.05G089500 Theobroma cacao HOM05D006980 ORTHO05D008704 5.0e-57 226.5 214 56.1
MELO3C022409.2 Cucumis melo HOM05D006980 ORTHO05D008704 8.5e-57 225.7 216 54.6
TAR633G1277 Trochodendron aralioides HOM05D006980 ORTHO05D008704 1.1e-56 225.3 211 53.1
EL10Ac6g13708 Beta vulgaris HOM05D006980 ORTHO05D008704 2.1e-55 221.1 212 56.1
CSS0041599 Camellia sinensis var. sinensis HOM05D006980 ORTHO05D008704 2.7e-55 220.7 222 51.8
TWI77G0642 Tripterygium wilfordii HOM05D006980 ORTHO05D008704 2.7e-55 220.7 206 53.4
Ah.02g130100 Amaranthus hybridus HOM05D006980 ORTHO05D008704 3.6e-55 220.3 214 53.7
Lj1g0023344 Lotus japonicus HOM05D006980 ORTHO05D008704 3.6e-55 220.3 215 54.0
PSO541G2622 Papaver somniferum HOM05D006980 ORTHO05D008704 1.0e-54 218.8 213 52.1
Actinidia05428 Actinidia chinensis HOM05D006980 ORTHO05D008704 8.8e-54 215.7 206 53.4
Aqoxy2G01180 Aquilegia oxysepala HOM05D006980 ORTHO05D008704 1.5e-53 214.9 213 50.2
arahy.Tifrunner.gnm1.ann1.IK7M5W Arachis hypogaea HOM05D006980 ORTHO05D008704 2.0e-53 214.5 207 52.7
arahy.Tifrunner.gnm1.ann1.3P0NFT Arachis hypogaea HOM05D006980 ORTHO05D008704 3.3e-53 213.8 207 53.1
PSO675G7214 Papaver somniferum HOM05D006980 ORTHO05D008704 5.7e-53 213.0 211 51.2
Sc02g0000270 Simmondsia chinensis HOM05D006980 ORTHO05D008704 1.3e-52 211.8 211 50.7
Atru.chr8.1533 Acer truncatum HOM05D006980 ORTHO05D008704 1.7e-52 211.5 174 57.5
TPR.G19555 Trifolium pratense HOM05D006980 ORTHO05D008704 2.4e-51 207.6 208 47.1
Cpa.g.sc166.4 Carica papaya HOM05D006980 ORTHO05D008704 4.1e-51 206.8 210 51.0
Ciclev10011570m.g Citrus clementina HOM05D006980 ORTHO05D008704 2.6e-50 204.1 219 50.2
Cc02_g28460 Coffea canephora HOM05D006980 ORTHO05D008704 3.4e-50 203.8 218 49.5
Medtr7g104640 Medicago truncatula HOM05D006980 ORTHO05D008704 3.4e-50 203.8 175 53.7
ClCG06G001250 Citrullus lanatus HOM05D006980 ORTHO05D008704 2.2e-49 201.1 215 52.1
SHI12421 Sapria himalayana HOM05D006980 ORTHO05D008704 2.2e-49 201.1 218 50.5
Nn6g34894 Nelumbo nucifera HOM05D006980 ORTHO05D008704 6.5e-49 199.5 186 55.9
CARHR130480 Cardamine hirsuta HOM05D006980 ORTHO05D008704 1.4e-48 198.4 227 45.4
Duzib106G0372 Durio zibethinus HOM05D006980 ORTHO05D008704 1.9e-48 198.0 214 50.9
THA.LOC104804920 Tarenaya hassleriana HOM05D006980 ORTHO05D008704 1.9e-48 198.0 218 47.7
AUR62005415 Chenopodium quinoa HOM05D006980 ORTHO05D008704 4.2e-48 196.8 216 50.0
AUR62014076 Chenopodium quinoa HOM05D006980 ORTHO05D008704 1.6e-47 194.9 216 49.5
AL4G32340 Arabidopsis lyrata HOM05D006980 ORTHO05D008704 2.7e-47 194.1 215 46.5
AT2G36240 Arabidopsis thaliana HOM05D006980 ORTHO05D008704 2.7e-47 194.1 215 46.5
Nitab4.5_0000025g0100 Nicotiana tabacum HOM05D006980 ORTHO05D008704 6.1e-47 193.0 201 48.8
Lsat_1_v5_gn_5_164841 Lactuca sativa HOM05D006980 ORTHO05D008704 2.3e-46 191.0 184 50.5
Nitab4.5_0003259g0020 Nicotiana tabacum HOM05D006980 ORTHO05D008704 3.9e-46 190.3 201 48.3
CDE06G1324 Ceratophyllum demersum HOM05D004140 ORTHO05D006116 5.1e-46 189.9 208 46.6
Rhsim03G0075000 Rhododendron simsii HOM05D006980 ORTHO05D008704 8.8e-46 189.1 213 48.8
Oeu056884.1 Olea europaea HOM05D006980 ORTHO05D008704 1.5e-45 188.3 179 50.8
SalBow3G1904 Salvia bowleyana HOM05D006980 ORTHO05D008704 2.0e-45 188.0 204 49.0
Peaxi162Scf00045g00156 Petunia axillaris HOM05D006980 ORTHO05D008704 2.6e-45 187.6 201 48.3
Sp4g18460 Schrenkiella parvula HOM05D006980 ORTHO05D008704 3.3e-45 187.2 215 46.0
Gorai.009G402600 Gossypium raimondii HOM05D006980 ORTHO05D008704 5.7e-45 186.4 214 48.6
Aa31LG5G21360 Aethionema arabicum HOM05D006980 ORTHO05D008704 9.7e-45 185.7 215 44.7
Lj2P137T25 Lonicera japonica HOM05D006980 ORTHO05D008704 1.7e-44 184.9 148 55.4
ATR0051G062 Amborella trichopoda HOM05D006980 ORTHO05D008704 4.8e-44 183.3 225 43.6
PGSC0003DMG401009543 Solanum tuberosum HOM05D006980 ORTHO05D008704 4.8e-44 183.3 200 46.0
MSTRG.19261 Avicennia marina HOM05D006980 ORTHO05D008704 1.1e-43 182.2 212 43.9
CAN.G137.42 Capsicum annuum HOM05D006980 ORTHO05D008704 1.1e-43 182.2 161 50.9
CAN.G2030.1 Capsicum annuum HOM05D006980 ORTHO05D008704 1.4e-43 181.8 210 45.7
BcaC02g11732 Brassica carinata HOM05D006980 ORTHO05D008704 4.1e-43 180.3 218 43.6
BolC4t22838H Brassica oleracea HOM05D006980 ORTHO05D008704 4.1e-43 180.3 218 43.6
ECA248G2176 Erigeron canadensis HOM05D006980 ORTHO05D008704 4.1e-43 180.3 211 45.0
Solyc08g006170.1 Solanum lycopersicum HOM05D006980 ORTHO05D008704 4.1e-43 180.3 210 44.3
Sopen08g002140 Solanum pennellii HOM05D006980 ORTHO05D008704 5.3e-43 179.9 200 45.0
SGA_v2.0_scaffold13G06715 Striga asiatica HOM05D006980 ORTHO05D008704 7.0e-43 179.5 214 43.9
HanXRQChr02g0032651 Helianthus annuus HOM05D006980 ORTHO05D008704 2.0e-42 177.9 186 47.8
GSVIVG01029738001 Vitis vinifera HOM05D006980 ORTHO05D008704 3.5e-42 177.2 203 47.3
BcaB02g09370 Brassica carinata HOM05D006980 ORTHO05D008704 3.8e-41 173.7 225 40.9
Lalb_Chr20g0111701 Lupinus albus HOM05D006980 ORTHO05D008704 3.8e-41 173.7 177 51.4
BraA05t19913Z Brassica rapa HOM05D006980 ORTHO05D008704 4.2e-40 170.2 222 42.3
Migut.J01034 Erythranthe guttata HOM05D006980 ORTHO05D008704 7.2e-40 169.5 208 43.3
C04p11900 Brassica napus HOM05D006980 ORTHO05D008704 2.1e-39 167.9 226 41.6
BcaC02g11726 Brassica carinata HOM05D006980 ORTHO05D008704 1.0e-38 165.6 208 41.3
BcaC02g11728 Brassica carinata HOM05D006980 ORTHO05D008704 1.0e-38 165.6 208 41.3
A05p09600 Brassica napus HOM05D006980 ORTHO05D008704 6.7e-38 162.9 223 41.7
Haze_19614 Corylus avellana HOM05D006980 ORTHO05D008704 6.7e-38 162.9 107 69.2
Phvul.001G190300 Phaseolus vulgaris HOM05D006980 ORTHO05D008704 6.7e-38 162.9 171 47.4
GSVIVG01015930001 Vitis vinifera HOM05D006980 ORTHO05D008704 8.8e-38 162.5 206 44.7
BcaB02g09372 Brassica carinata HOM05D006980 ORTHO05D008704 1.5e-37 161.8 250 38.4
Cc00_g27900 Coffea canephora HOM05D006980 ORTHO05D008704 3.3e-37 160.6 210 43.3
VMungo1383G3509 Vigna mungo HOM05D006980 ORTHO05D008704 4.8e-36 156.8 165 45.5
SEGI_40503 Sequoiadendron giganteum HOM05D006980 ORTHO05D008704 8.2e-36 156.0 218 41.3
BcaC02g11731 Brassica carinata HOM05D006980 ORTHO05D008704 1.1e-35 155.6 140 47.1
Sabra06G0051200 Salix brachista HOM05D006980 ORTHO05D008704 2.4e-35 154.5 107 65.4
Glyma.03G196000 Glycine max HOM05D006980 ORTHO05D008704 3.1e-35 154.1 157 49.0
HPP92_011900 Vanilla planifolia HOM05D006980 ORTHO05D008704 7.0e-35 152.9 169 46.2
SEGI_13947 Sequoiadendron giganteum HOM05D006980 ORTHO05D008704 1.2e-34 152.1 210 41.4
SalBow5G2618 Salvia bowleyana HOM05D004325 ORTHO05D005470 6.5e-33 146.4 115 58.3
FAN02G3599 Fragaria x ananassa HOM05D006980 ORTHO05D008704 3.6e-31 140.6 107 59.8
arahy.Tifrunner.gnm1.ann1.FQN2WV Arachis hypogaea HOM05D006980 ORTHO05D008704 1.8e-30 138.3 115 57.4
Thhalv10016603m.g Eutrema salsugineum HOM05D006980 ORTHO05D008704 1.7e-28 131.7 187 38.5
Ca_09007_v3 Cicer arietinum L. HOM05D006980 ORTHO05D008704 4.8e-28 130.2 107 56.1
Psat3g033240 Pisum sativum HOM05D006980 ORTHO05D008704 2.7e-23 114.4 107 49.5
DCAR_013476 Daucus carota HOM05D006980 ORTHO05D008704 2.2e-20 104.8 87 49.4
Nitab4.5_0000008g0800 Nicotiana tabacum HOM05D007172 ORTHO05D009267 2.8e-07 61.2 155 29.0
SEGI_09666 Sequoiadendron giganteum HOM05D007402 ORTHO05D003673 3.1e-06 57.8 180 25.6
CSS0033736 Camellia sinensis var. sinensis HOM05D007172 ORTHO05D009267 4.0e-06 57.4 132 26.5
CSS0036168 Camellia sinensis var. sinensis HOM05D007172 ORTHO05D009267 4.0e-06 57.4 132 26.5
FvH4_6g18780 Fragaria vesca HOM05D006980 ORTHO05D008704 4.0e-06 57.4 43 58.1
FAN14G4048 Fragaria x ananassa HOM05D006980 ORTHO05D008704 4.0e-06 57.4 43 58.1


User provided reference genes

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