Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G00741 Eucalyptus grandis HOM05D008518 ORTHO05D010253 8.0e-60 233.4 106 100.0
Eucgr.C01967 Eucalyptus grandis HOM05D000045 ORTHO05D000067 1.3e-46 189.5 105 80.0
Eucgr.B01589 Eucalyptus grandis HOM05D000045 ORTHO05D000067 3.2e-45 184.9 105 79.0
TWI31G1385 Tripterygium wilfordii HOM05D000045 ORTHO05D010253 1.7e-25 119.4 105 54.3
TWI74G0276 Tripterygium wilfordii HOM05D000045 ORTHO05D010253 1.7e-25 119.4 105 54.3
TWI74G1604 Tripterygium wilfordii HOM05D000045 ORTHO05D010253 1.7e-25 119.4 105 54.3
TWI63G0656 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.1e-24 116.7 105 52.4
TWI74G1582 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.1e-24 114.8 105 50.5
Peaxi162Scf01343g00153 Petunia axillaris HOM05D008518 ORTHO05D010253 1.7e-22 109.4 105 45.7
CAN.G531.14 Capsicum annuum HOM05D008518 ORTHO05D010253 1.6e-20 102.8 105 44.8
Nitab4.5_0007303g0080 Nicotiana tabacum HOM05D008518 ORTHO05D010253 2.8e-20 102.1 105 42.9
Peaxi162Scf00044g00179 Petunia axillaris HOM05D008518 ORTHO05D010253 2.8e-20 102.1 105 45.7
Eucgr.B00042 Eucalyptus grandis HOM05D000045 ORTHO05D000067 8.1e-20 100.5 106 48.1
CAN.G474.1 Capsicum annuum HOM05D000045 ORTHO05D000067 6.8e-19 97.4 105 42.9
Eucgr.L03237 Eucalyptus grandis HOM05D008518 ORTHO05D010253 6.8e-19 97.4 106 48.1
Nitab4.5_0006102g0030 Nicotiana tabacum HOM05D008518 ORTHO05D010253 8.9e-19 97.1 105 43.8
Peaxi162Scf00170g01230 Petunia axillaris HOM05D008518 ORTHO05D010253 8.9e-19 97.1 97 46.4
CAN.G402.1 Capsicum annuum HOM05D008518 ORTHO05D010253 9.8e-18 93.6 105 41.0
Eucgr.H01407 Eucalyptus grandis HOM05D000045 ORTHO05D000067 2.2e-17 92.4 105 46.7
Eucgr.I00868 Eucalyptus grandis HOM05D008518 ORTHO05D010253 8.3e-17 90.5 107 45.8
Eucgr.E01219 Eucalyptus grandis HOM05D000045 ORTHO05D000067 1.1e-16 90.1 105 47.6
Eucgr.I00824 Eucalyptus grandis HOM05D000045 ORTHO05D000067 5.4e-16 87.8 105 47.6
Peaxi162Scf00186g01113 Petunia axillaris HOM05D008518 ORTHO05D010253 1.6e-15 86.3 105 37.1
Peaxi162Scf00194g00110 Petunia axillaris HOM05D008518 ORTHO05D010253 2.1e-15 85.9 105 41.9
Eucgr.E01986 Eucalyptus grandis HOM05D008518 ORTHO05D010253 4.6e-15 84.7 105 45.7
Peaxi162Scf00300g00029 Petunia axillaris HOM05D008518 ORTHO05D010253 7.8e-15 84.0 106 40.6
Nitab4.5_0005347g0050 Nicotiana tabacum HOM05D008518 ORTHO05D010253 8.6e-14 80.5 83 43.4
Peaxi162Scf00703g00234 Petunia axillaris HOM05D008518 ORTHO05D010253 8.6e-14 80.5 105 42.9
Peaxi162Scf00057g00055 Petunia axillaris HOM05D008518 ORTHO05D010253 1.5e-13 79.7 105 39.0
RcHm_v2.0_Chr2g0100471 Rosa chinensis HOM05D000045 ORTHO05D000067 1.9e-13 79.3 105 35.2
Peaxi162Scf00170g01227 Petunia axillaris HOM05D000416 ORTHO05D000322 2.5e-13 79.0 99 43.4
Prupe.2G147900 Prunus persica HOM05D000045 ORTHO05D000067 4.3e-13 78.2 104 38.5
Prupe.6G011300 Prunus persica HOM05D000045 ORTHO05D000067 4.3e-13 78.2 104 38.5
Hma1.2p1_0177F.1_g078085 Hydrangea macrophylla HOM05D000045 ORTHO05D010736 5.6e-13 77.8 105 39.0
MD15G1252700 Malus domestica HOM05D000045 ORTHO05D000067 2.1e-12 75.9 105 36.2
Prupe.5G053800 Prunus persica HOM05D000045 ORTHO05D000067 2.1e-12 75.9 104 36.5
Eucgr.B01259 Eucalyptus grandis HOM05D000045 ORTHO05D000067 8.1e-12 73.9 105 41.9
Eucgr.J01116 Eucalyptus grandis HOM05D000045 ORTHO05D000067 8.1e-12 73.9 88 43.2
Prupe.7G161400 Prunus persica HOM05D000045 ORTHO05D000067 1.1e-11 73.6 105 34.3
Rhsim04G0143500 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.8e-11 72.8 108 32.4
CANSAT64G2897 Cannabis sativa HOM05D000045 ORTHO05D000067 2.3e-11 72.4 106 37.7
MD02G1139600 Malus domestica HOM05D000045 ORTHO05D000067 4.0e-11 71.6 105 33.3
Peaxi162Scf00193g00712 Petunia axillaris HOM05D008518 ORTHO05D010253 1.2e-10 70.1 104 32.7
Prupe.7G161500 Prunus persica HOM05D000045 ORTHO05D000067 1.2e-10 70.1 105 33.3
Peaxi162Scf00035g00163 Petunia axillaris HOM05D008518 ORTHO05D010253 1.5e-10 69.7 105 35.2
Eucgr.F00557 Eucalyptus grandis HOM05D000045 ORTHO05D000067 2.0e-10 69.3 83 48.2
Rhsim01G0165200 Rhododendron simsii HOM05D000045 ORTHO05D010736 2.0e-10 69.3 102 34.3
QL02p025436 Quercus lobata HOM05D000045 ORTHO05D010253 3.4e-10 68.6 102 35.3
ECA247G3880 Erigeron canadensis HOM05D003220 ORTHO05D003944 4.4e-10 68.2 96 39.6
Potri.016G058700 Populus trichocarpa HOM05D000045 ORTHO05D000067 4.4e-10 68.2 98 35.7
ECA247G0434 Erigeron canadensis HOM05D000045 ORTHO05D004890 5.8e-10 67.8 103 42.7
PGR044G2175 Punica granatum HOM05D000045 ORTHO05D000067 9.9e-10 67.0 102 33.3
RcHm_v2.0_Chr2g0100481 Rosa chinensis HOM05D000045 ORTHO05D000067 9.9e-10 67.0 105 33.3
QL04p022188 Quercus lobata HOM05D000045 ORTHO05D000067 1.7e-09 66.2 102 35.3
FvH4_6g38410 Fragaria vesca HOM05D000122 ORTHO05D000067 2.2e-09 65.9 101 28.7
Cc07_g21320 Coffea canephora HOM05D000045 ORTHO05D000611 2.9e-09 65.5 107 37.4
Eucgr.I00733 Eucalyptus grandis HOM05D000045 ORTHO05D010253 2.9e-09 65.5 105 40.0
Peaxi162Scf00148g00123 Petunia axillaris HOM05D000045 ORTHO05D010253 2.9e-09 65.5 105 34.3
QL93p0049_0121 Quercus lobata HOM05D000045 ORTHO05D000067 2.9e-09 65.5 102 35.3
Ciclev10010993m.g Citrus clementina HOM05D000045 ORTHO05D000067 3.8e-09 65.1 105 31.4
COL.COLO4_15687 Corchorus olitorius HOM05D000045 ORTHO05D010736 4.9e-09 64.7 108 34.3
QL05p056997 Quercus lobata HOM05D000045 ORTHO05D000067 4.9e-09 64.7 102 35.3
PSO170G0920 Papaver somniferum HOM05D000045 ORTHO05D000067 6.4e-09 64.3 110 33.6
PSO528G0229 Papaver somniferum HOM05D000045 ORTHO05D000067 6.4e-09 64.3 110 33.6
Manes.09G036600 Manihot esculenta HOM05D000393 ORTHO05D019408 8.4e-09 63.9 92 34.8
Prupe.4G265400 Prunus persica HOM05D000045 ORTHO05D000067 8.4e-09 63.9 110 33.6
Prupe.I001300 Prunus persica HOM05D000045 ORTHO05D000067 8.4e-09 63.9 110 32.7
CDE12G0459 Ceratophyllum demersum HOM05D000045 ORTHO05D000067 1.4e-08 63.2 106 34.9
Solyc03g044690.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 1.4e-08 63.2 105 36.2
Atru.chr9.622 Acer truncatum HOM05D000045 ORTHO05D000067 1.9e-08 62.8 105 28.6
Ah.10g036100 Amaranthus hybridus HOM05D000045 ORTHO05D000067 1.9e-08 62.8 103 35.9
Atru.chr6.1102 Acer truncatum HOM05D000045 ORTHO05D010253 2.4e-08 62.4 94 31.9
Ah.13g067360 Amaranthus hybridus HOM05D000045 ORTHO05D010253 2.4e-08 62.4 103 35.0
CAN.G915.12 Capsicum annuum HOM05D000045 ORTHO05D000067 3.2e-08 62.0 108 35.2
Manes.09G036700 Manihot esculenta HOM05D000045 ORTHO05D000067 3.2e-08 62.0 94 33.0
HPP92_011393 Vanilla planifolia HOM05D000045 ORTHO05D000067 3.2e-08 62.0 108 35.2
Duzib205G1238 Durio zibethinus HOM05D000045 ORTHO05D000067 4.1e-08 61.6 104 30.8
ECA234G0407 Erigeron canadensis HOM05D001762 ORTHO05D001774 4.1e-08 61.6 104 34.6
Aqoxy5G00013 Aquilegia oxysepala HOM05D000045 ORTHO05D000611 5.4e-08 61.2 111 29.7
Ciclev10027335m.g Citrus clementina HOM05D000045 ORTHO05D000611 5.4e-08 61.2 107 30.8
Aqoxy6G01400 Aquilegia oxysepala HOM05D000045 ORTHO05D026708 7.1e-08 60.8 112 33.9
Prupe.1G194600 Prunus persica HOM05D000045 ORTHO05D000067 7.1e-08 60.8 110 32.7
QL02p051760 Quercus lobata HOM05D000045 ORTHO05D000067 7.1e-08 60.8 103 37.9
Eucgr.B01750 Eucalyptus grandis HOM05D000045 ORTHO05D000067 9.2e-08 60.5 96 34.4
HanXRQChr13g0424971 Helianthus annuus HOM05D000045 ORTHO05D000067 9.2e-08 60.5 113 34.5
PSO675G8607 Papaver somniferum HOM05D000045 ORTHO05D009425 1.2e-07 60.1 112 30.4
PSO832G3221 Papaver somniferum HOM05D000045 ORTHO05D000067 1.2e-07 60.1 112 37.5
arahy.Tifrunner.gnm1.ann1.U80MXJ Arachis hypogaea HOM05D000045 ORTHO05D000067 1.6e-07 59.7 108 35.2
Peaxi162Scf00057g02122 Petunia axillaris HOM05D008518 ORTHO05D010253 1.6e-07 59.7 105 35.2
TPR.G23616 Trifolium pratense HOM05D000045 ORTHO05D000067 1.6e-07 59.7 105 31.4
CAN.G874.79 Capsicum annuum HOM05D008518 ORTHO05D010253 2.7e-07 58.9 58 43.1
TAR633G0535 Trochodendron aralioides HOM05D000045 ORTHO05D000067 2.7e-07 58.9 125 36.0
MBI06_g08607_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D000067 3.5e-07 58.5 109 32.1
PSO063G7437 Papaver somniferum HOM05D000045 ORTHO05D000067 3.5e-07 58.5 112 37.5
CDE07G0457 Ceratophyllum demersum HOM05D000045 ORTHO05D000067 4.6e-07 58.2 106 31.1
FvH4_3g29141 Fragaria vesca HOM05D000045 ORTHO05D021070 4.6e-07 58.2 109 33.0
PSO302G0268 Papaver somniferum HOM05D000045 ORTHO05D000067 4.6e-07 58.2 112 37.5
Aqoxy5G01360 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 6.0e-07 57.8 112 30.4
FvH4_2g07051 Fragaria vesca HOM05D000045 ORTHO05D010253 6.0e-07 57.8 101 25.7
Gorai.003G096100 Gossypium raimondii HOM05D000045 ORTHO05D000067 6.0e-07 57.8 98 30.6
PSO170G5387 Papaver somniferum HOM05D000045 ORTHO05D000067 7.8e-07 57.4 101 32.7
PSO528G0092 Papaver somniferum HOM05D000045 ORTHO05D000067 7.8e-07 57.4 101 32.7
QL02p073271 Quercus lobata HOM05D000045 ORTHO05D000067 7.8e-07 57.4 107 33.6
COL.COLO4_20854 Corchorus olitorius HOM05D000045 ORTHO05D000611 1.3e-06 56.6 110 33.6
Lj2g0023561 Lotus japonicus HOM05D000045 ORTHO05D000067 1.3e-06 56.6 109 33.0
CiPaw.04G032300 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.3e-06 55.8 109 31.2
PSO210G3314 Papaver somniferum HOM05D000045 ORTHO05D000067 2.3e-06 55.8 123 32.5
Phvul.004G058200 Phaseolus vulgaris HOM05D000045 ORTHO05D000067 2.3e-06 55.8 109 33.9
PSO170G6512 Papaver somniferum HOM05D000045 ORTHO05D000067 3.0e-06 55.5 112 31.2
PSO210G0651 Papaver somniferum HOM05D000045 ORTHO05D000067 3.0e-06 55.5 112 31.2
QL07p012792 Quercus lobata HOM05D000045 ORTHO05D000067 3.0e-06 55.5 105 31.4
Lj3g0000730 Lotus japonicus HOM05D000045 ORTHO05D010597 3.9e-06 55.1 109 30.3
ATR0213G008 Amborella trichopoda HOM05D038597 ORTHO05D000611 5.1e-06 54.7 99 34.3
Aqoxy6G00229 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 5.1e-06 54.7 110 29.1
CANSAT64G1822 Cannabis sativa HOM05D000045 ORTHO05D000067 6.6e-06 54.3 107 30.8
Os07g0563600 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 6.6e-06 54.3 106 31.1
Psat1g083280 Pisum sativum HOM05D000045 ORTHO05D000067 6.6e-06 54.3 104 36.5
Rhsim02G0126700 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.6e-06 54.3 108 28.7
TPR.G600 Trifolium pratense HOM05D000045 ORTHO05D007522 6.6e-06 54.3 100 35.0
Duzib147G0739 Durio zibethinus HOM05D000045 ORTHO05D000067 8.6e-06 53.9 107 31.8
HanXRQChr02g0033411 Helianthus annuus HOM05D000045 ORTHO05D000067 8.6e-06 53.9 98 34.7


User provided reference genes

Program Settings