Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G00737 Eucalyptus grandis HOM05D000445 ORTHO05D000314 2.2e-41 171.8 81 100.0
BolSC37t60781H Brassica oleracea HOM05D000445 ORTHO05D000314 1.6e-31 139.0 82 82.9
Nn3g16153 Nelumbo nucifera HOM05D000445 ORTHO05D000314 1.7e-30 135.6 79 82.3
unitig_91.g26515 Utricularia gibba HOM05D000445 ORTHO05D000314 9.2e-24 113.2 77 75.3
HanXRQChr11g0326541 Helianthus annuus HOM05D000445 ORTHO05D000314 1.7e-22 109.0 63 84.1
Oeu062827.1 Olea europaea HOM05D000445 ORTHO05D000314 2.3e-22 108.6 80 72.5
RcHm_v2.0_Chr2g0118441 Rosa chinensis HOM05D000445 ORTHO05D000314 5.0e-22 107.5 71 77.5
HanXRQChr00c0533g0575561 Helianthus annuus HOM05D000445 ORTHO05D000314 7.3e-21 103.6 60 83.3
Lsat_1_v5_gn_7_67161 Lactuca sativa HOM05D000445 ORTHO05D000314 4.9e-17 90.9 79 60.8
BraSC25t45893Z Brassica rapa HOM05D000445 ORTHO05D000314 1.4e-16 89.4 75 66.7
Nitab4.5_0020349g0060 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.6e-15 85.9 79 58.2
arahy.Tifrunner.gnm1.ann1.R6YYA0 Arachis hypogaea HOM05D000445 ORTHO05D000314 7.8e-15 83.6 46 87.0
Eucgr.G01321 Eucalyptus grandis HOM05D000445 ORTHO05D000314 4.0e-11 71.2 41 82.9
HanXRQChr00c0392g0574461 Helianthus annuus HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
HanXRQChr00c0394g0574511 Helianthus annuus HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
HanXRQChr00c0434g0574681 Helianthus annuus HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
HanXRQChr00c0454g0574911 Helianthus annuus HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
HanXRQChr00c0524g0575411 Helianthus annuus HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
HanXRQChr00c0585g0576241 Helianthus annuus HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
HanXRQChr04g0127431 Helianthus annuus HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
HanXRQChr13g0416601 Helianthus annuus HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
HanXRQChr15g0474951 Helianthus annuus HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
Lsat_1_v5_gn_3_105620 Lactuca sativa HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
Lsat_1_v5_gn_3_13441 Lactuca sativa HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
Lsat_1_v5_gn_8_26500 Lactuca sativa HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
Lsat_1_v5_gn_9_18701 Lactuca sativa HOM05D000445 ORTHO05D000314 3.4e-10 68.2 36 86.1
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 5.8e-10 67.4 35 88.6
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 5.8e-10 67.4 35 88.6
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 9.9e-10 66.6 35 85.7
Gorai.009G328900 Gossypium raimondii HOM05D000445 ORTHO05D000314 1.3e-09 66.2 42 78.6
EL10Ac2g04026 Beta vulgaris HOM05D000445 ORTHO05D000314 2.2e-09 65.5 47 68.1
Nitab4.5_0022403g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.9e-09 65.1 40 75.0
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 2.9e-09 65.1 35 85.7
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 2.9e-09 65.1 35 85.7
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 2.9e-09 65.1 35 85.7
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 3.7e-09 64.7 35 85.7
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 3.7e-09 64.7 35 85.7
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 3.7e-09 64.7 36 83.3
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 3.7e-09 64.7 36 83.3
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 3.7e-09 64.7 36 83.3
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 3.7e-09 64.7 36 83.3
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 3.7e-09 64.7 36 83.3
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 3.7e-09 64.7 36 83.3
PGSC0003DMG400015060 Solanum tuberosum HOM05D000445 ORTHO05D000314 3.7e-09 64.7 36 83.3
Lj4g0020232 Lotus japonicus HOM05D000445 ORTHO05D000314 4.9e-09 64.3 35 85.7
Oeu062872.1 Olea europaea HOM05D000445 ORTHO05D000314 4.9e-09 64.3 83 47.0
TPR.G25940 Trifolium pratense HOM05D000445 ORTHO05D000314 4.9e-09 64.3 37 78.4
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 8.3e-09 63.5 35 85.7
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 8.3e-09 63.5 35 85.7
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 1.4e-08 62.8 35 85.7
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 1.4e-08 62.8 35 85.7
DCAR_032529 Daucus carota HOM05D000445 ORTHO05D000314 1.4e-08 62.8 36 80.6
DCAR_032547 Daucus carota HOM05D000445 ORTHO05D000314 1.4e-08 62.8 36 80.6
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 1.4e-08 62.8 35 85.7
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 1.4e-08 62.8 35 85.7
Nitab4.5_0027450g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.4e-08 62.0 42 76.2
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 2.4e-08 62.0 33 87.9
Nn070s42380 Nelumbo nucifera HOM05D000445 ORTHO05D000314 3.2e-08 61.6 35 82.9
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 3.2e-08 61.6 35 82.9
Peaxi162Scf00211g00218 Petunia axillaris HOM05D000445 ORTHO05D000314 3.2e-08 61.6 40 70.0
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 3.2e-08 61.6 35 82.9
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 4.1e-08 61.2 35 82.9
Lalb_Chr01g0014991 Lupinus albus HOM05D000445 ORTHO05D000314 4.1e-08 61.2 35 82.9
Oeu062847.1 Olea europaea HOM05D000445 ORTHO05D000314 5.4e-08 60.8 42 71.4
Sc05g0004090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 5.4e-08 60.8 35 82.9
Gohir.A12G088950 Gossypium hirsutum HOM05D000445 ORTHO05D000314 9.2e-08 60.1 28 96.4
Gorai.011G141200 Gossypium raimondii HOM05D000445 ORTHO05D000314 1.2e-07 59.7 41 68.3
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 1.6e-07 59.3 35 77.1
EL10As18g24166 Beta vulgaris HOM05D000445 ORTHO05D000314 2.1e-07 58.9 35 80.0
Hund08796 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.1e-07 58.9 35 80.0
Hund10280 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.1e-07 58.9 35 80.0
Hund28591 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.1e-07 58.9 35 80.0
Hund28646 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.1e-07 58.9 35 80.0
Hund28772 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.1e-07 58.9 35 80.0
Hund29423 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.1e-07 58.9 35 80.0
HanXRQChr11g0336101 Helianthus annuus HOM05D000445 ORTHO05D000314 3.5e-07 58.2 60 56.7
HanXRQChr11g0336121 Helianthus annuus HOM05D000445 ORTHO05D000314 3.5e-07 58.2 60 56.7
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 3.5e-07 58.2 35 77.1
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 3.5e-07 58.2 35 77.1
Thhalv10001808m.g Eutrema salsugineum HOM05D000445 ORTHO05D000314 7.8e-07 57.0 35 74.3
Aqoxy169s001 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 1.0e-06 56.6 30 86.7
Aqoxy3G01862 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 1.0e-06 56.6 30 86.7
AL2G20470 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 1.0e-06 56.6 35 74.3
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 1.0e-06 56.6 35 74.3
BolSC49t61128H Brassica oleracea HOM05D000445 ORTHO05D000314 1.0e-06 56.6 35 74.3
BraSC103t45415Z Brassica rapa HOM05D000445 ORTHO05D000314 1.0e-06 56.6 35 74.3
BraSC103t45439Z Brassica rapa HOM05D000445 ORTHO05D000314 1.0e-06 56.6 35 74.3
BraSC143t45643Z Brassica rapa HOM05D000445 ORTHO05D000314 1.0e-06 56.6 35 74.3
BraSC179t45786Z Brassica rapa HOM05D000445 ORTHO05D000314 1.0e-06 56.6 35 74.3
BraSC59t46524Z Brassica rapa HOM05D000445 ORTHO05D000314 1.0e-06 56.6 35 74.3
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 1.0e-06 56.6 60 55.0
Nitab4.5_0023562g0040 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.0e-06 56.6 42 71.4
Solyc00g500148.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.0e-06 56.6 42 71.4
EL10Ac1g00652 Beta vulgaris HOM05D000445 ORTHO05D000314 1.3e-06 56.2 35 77.1
Nitab4.5_0001761g0270 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.3e-06 56.2 27 92.6
Solyc10g018980.3 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.3e-06 56.2 32 84.4
Nitab4.5_0005831g0050 Nicotiana tabacum HOM05D002660 ORTHO05D000314 5.1e-06 54.3 29 86.2
Gohir.D01G101865 Gossypium hirsutum HOM05D000445 ORTHO05D000314 6.6e-06 53.9 26 96.2


User provided reference genes

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