Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G00566 Eucalyptus grandis HOM05D005102 ORTHO05D006090 3.2e-60 235.0 124 100.0
CSS0019941 Camellia sinensis var. sinensis HOM05D005102 ORTHO05D006090 4.6e-43 177.9 121 74.4
CSS0043447 Camellia sinensis var. sinensis HOM05D005102 ORTHO05D006090 4.6e-43 177.9 121 74.4
CiPaw.01G176900 Carya illinoinensis HOM05D005102 ORTHO05D006090 2.0e-41 172.6 119 73.9
Actinidia37761 Actinidia chinensis HOM05D005102 ORTHO05D006090 9.7e-41 170.2 119 72.3
Cfa014795 Carpinus fangiana HOM05D005102 ORTHO05D006090 8.2e-40 167.2 121 69.4
TWI09G0526 Tripterygium wilfordii HOM05D005102 ORTHO05D006090 8.2e-40 167.2 119 70.6
Thecc.04G266700 Theobroma cacao HOM05D005102 ORTHO05D006090 1.1e-39 166.8 119 71.4
Manes.03G102500 Manihot esculenta HOM05D005102 ORTHO05D006090 1.8e-39 166.0 119 72.3
QL08p018871 Quercus lobata HOM05D005102 ORTHO05D006090 1.8e-39 166.0 118 73.7
Ciclev10005541m.g Citrus clementina HOM05D005102 ORTHO05D006090 5.3e-39 164.5 120 71.7
Haze_11479 Corylus avellana HOM05D005102 ORTHO05D006090 9.1e-39 163.7 119 69.7
GSVIVG01027934001 Vitis vinifera HOM05D005102 ORTHO05D006090 9.1e-39 163.7 119 71.4
Cpa.g.sc59.14 Carica papaya HOM05D005102 ORTHO05D006090 2.0e-38 162.5 119 70.6
Lj6A637G59 Lonicera japonica HOM05D005102 ORTHO05D006090 3.4e-38 161.8 122 67.2
Duzib052G0859 Durio zibethinus HOM05D005102 ORTHO05D006090 5.9e-38 161.0 119 68.9
QL06p021548 Quercus lobata HOM05D005102 ORTHO05D006090 7.7e-38 160.6 118 72.0
Nn3g19843 Nelumbo nucifera HOM05D005102 ORTHO05D006090 2.9e-37 158.7 120 71.7
COL.COLO4_15983 Corchorus olitorius HOM05D005102 ORTHO05D006090 3.8e-37 158.3 119 69.7
vmacro04848 Vaccinium macrocarpon HOM05D005102 ORTHO05D006090 3.8e-37 158.3 119 68.1
Eucgr.K00416 Eucalyptus grandis HOM05D005102 ORTHO05D006090 6.5e-37 157.5 89 94.4
Gorai.005G054400 Gossypium raimondii HOM05D005102 ORTHO05D006090 1.9e-36 156.0 119 68.9
Nitab4.5_0005154g0050 Nicotiana tabacum HOM05D005102 ORTHO05D006090 1.9e-36 156.0 122 68.0
Gohir.A02G043600 Gossypium hirsutum HOM05D005102 ORTHO05D006090 4.2e-36 154.8 119 68.1
Peaxi162Scf00531g00327 Petunia axillaris HOM05D000868 ORTHO05D000711 5.5e-36 154.5 122 66.4
Potri.010G064900 Populus trichocarpa HOM05D005102 ORTHO05D006090 5.5e-36 154.5 127 64.6
Rhsim01G0226300 Rhododendron simsii HOM05D005102 ORTHO05D006090 7.2e-36 154.1 119 65.5
Prupe.5G230500 Prunus persica HOM05D005102 ORTHO05D006090 9.4e-36 153.7 119 67.2
DCAR_030764 Daucus carota HOM05D005102 ORTHO05D006090 1.2e-35 153.3 121 66.9
arahy.Tifrunner.gnm1.ann1.4HQ694 Arachis hypogaea HOM05D005102 ORTHO05D006090 1.6e-35 152.9 119 70.6
arahy.Tifrunner.gnm1.ann1.Z186RR Arachis hypogaea HOM05D005102 ORTHO05D006090 1.6e-35 152.9 119 70.6
RcHm_v2.0_Chr7g0178711 Rosa chinensis HOM05D005102 ORTHO05D006090 2.1e-35 152.5 120 70.0
FAN04G2658 Fragaria x ananassa HOM05D005102 ORTHO05D006090 4.7e-35 151.4 120 70.8
FAN08G3625 Fragaria x ananassa HOM05D005102 ORTHO05D006090 4.7e-35 151.4 120 70.8
Oeu047122.2 Olea europaea HOM05D005102 ORTHO05D006090 4.7e-35 151.4 121 69.4
FvH4_5g17100 Fragaria vesca HOM05D005102 ORTHO05D006090 7.9e-35 150.6 120 70.8
FAN18G4219 Fragaria x ananassa HOM05D005102 ORTHO05D006090 7.9e-35 150.6 120 70.8
Glyma.15G125200 Glycine max HOM05D005102 ORTHO05D006090 1.8e-34 149.4 119 66.4
Lj3g0001784 Lotus japonicus HOM05D005102 ORTHO05D006090 1.8e-34 149.4 119 65.5
Lj6g0009036 Lotus japonicus HOM05D005102 ORTHO05D006090 1.8e-34 149.4 119 65.5
Migut.G00562 Erythranthe guttata HOM05D005102 ORTHO05D006090 2.3e-34 149.1 119 68.1
FAN13G1436 Fragaria x ananassa HOM05D005102 ORTHO05D006090 2.3e-34 149.1 120 70.8
Glyma.09G019100 Glycine max HOM05D005102 ORTHO05D006090 2.3e-34 149.1 120 68.3
Nitab4.5_0001041g0140 Nicotiana tabacum HOM05D005102 ORTHO05D006090 2.3e-34 149.1 119 67.2
Cc03_g06480 Coffea canephora HOM05D005102 ORTHO05D006090 3.9e-34 148.3 119 66.4
MD06G1229400 Malus domestica HOM05D005102 ORTHO05D006090 6.7e-34 147.5 118 65.3
Sopen09g033820 Solanum pennellii HOM05D005102 ORTHO05D006090 6.7e-34 147.5 120 65.0
THA.LOC104808740 Tarenaya hassleriana HOM05D005102 ORTHO05D006090 6.7e-34 147.5 120 66.7
MSTRG.9850 Avicennia marina HOM05D005102 ORTHO05D006090 8.8e-34 147.1 120 66.7
Psat7g046400 Pisum sativum HOM05D005102 ORTHO05D006090 1.1e-33 146.7 119 65.5
TAR365G0288 Trochodendron aralioides HOM05D005102 ORTHO05D006090 4.4e-33 144.8 120 63.3
Ca_11361_v3 Cicer arietinum L. HOM05D005102 ORTHO05D006090 5.7e-33 144.4 119 63.0
HanXRQChr01g0011201 Helianthus annuus HOM05D005102 ORTHO05D006090 5.7e-33 144.4 119 69.7
Solyc09g090860.4 Solanum lycopersicum HOM05D005102 ORTHO05D006090 5.7e-33 144.4 119 64.7
PGSC0003DMG400001501 Solanum tuberosum HOM05D005102 ORTHO05D006090 7.4e-33 144.1 120 64.2
Sabra10G0042100 Salix brachista HOM05D005102 ORTHO05D006090 9.7e-33 143.7 135 57.8
CANSAT78G2207 Cannabis sativa HOM05D005102 ORTHO05D006090 1.3e-32 143.3 119 69.7
Atru.chr12.1207 Acer truncatum HOM05D005102 ORTHO05D006090 2.2e-32 142.5 122 64.8
Dinv27121 Davidia involucrata HOM05D005102 ORTHO05D006090 2.2e-32 142.5 107 68.2
Medtr2g028660 Medicago truncatula HOM05D005102 ORTHO05D006090 2.2e-32 142.5 119 63.0
PSO764G0108 Papaver somniferum HOM05D005102 ORTHO05D006090 2.2e-32 142.5 118 63.6
PSO832G1873 Papaver somniferum HOM05D005102 ORTHO05D006090 2.8e-32 142.1 119 64.7
CAN.G812.17 Capsicum annuum HOM05D005102 ORTHO05D006090 1.1e-31 140.2 119 62.2
Aqoxy5G00133 Aquilegia oxysepala HOM05D005102 ORTHO05D006090 3.1e-31 138.7 106 67.0
ECA247G3419 Erigeron canadensis HOM05D005102 ORTHO05D006090 3.1e-31 138.7 120 65.8
BcaC01g03326 Brassica carinata HOM05D005102 ORTHO05D006090 5.3e-31 137.9 121 59.5
Phvul.006G132800 Phaseolus vulgaris HOM05D005102 ORTHO05D006090 7.0e-31 137.5 122 59.0
Aa31LG8G11040 Aethionema arabicum HOM05D005102 ORTHO05D006090 9.1e-31 137.1 121 61.2
BcaB06g26613 Brassica carinata HOM05D005102 ORTHO05D006090 9.1e-31 137.1 121 60.3
C03p53630 Brassica napus HOM05D005102 ORTHO05D006090 9.1e-31 137.1 121 59.5
BolC3t17623H Brassica oleracea HOM05D005102 ORTHO05D006090 9.1e-31 137.1 121 59.5
Phvul.006G133300 Phaseolus vulgaris HOM05D005102 ORTHO05D006090 9.1e-31 137.1 119 60.5
Psat1g170520 Pisum sativum HOM05D005102 ORTHO05D006090 9.1e-31 137.1 120 63.3
THA.LOC104810405 Tarenaya hassleriana HOM05D005102 ORTHO05D006090 9.1e-31 137.1 90 80.0
TPR.G17506 Trifolium pratense HOM05D005102 ORTHO05D006090 1.6e-30 136.3 120 64.2
Nitab4.5_0002613g0070 Nicotiana tabacum HOM05D005102 ORTHO05D006090 4.5e-30 134.8 110 66.4
Thhalv10002630m.g Eutrema salsugineum HOM05D005102 ORTHO05D006090 7.7e-30 134.0 120 60.0
A07p08000 Brassica napus HOM05D005102 ORTHO05D006090 1.0e-29 133.7 121 60.3
BraA07t28587Z Brassica rapa HOM05D005102 ORTHO05D006090 1.0e-29 133.7 121 60.3
Sed0020820 Sechium edule HOM05D005102 ORTHO05D006090 1.3e-29 133.3 119 63.0
BcaC06g35682 Brassica carinata HOM05D005102 ORTHO05D006090 2.2e-29 132.5 122 61.5
C07p12060 Brassica napus HOM05D005102 ORTHO05D006090 2.2e-29 132.5 122 61.5
BolC7t41674H Brassica oleracea HOM05D005102 ORTHO05D006090 2.2e-29 132.5 122 61.5
AT3G24315 Arabidopsis thaliana HOM05D005102 ORTHO05D006090 6.5e-29 131.0 119 62.2
Lalb_Chr06g0169571 Lupinus albus HOM05D005102 ORTHO05D006090 1.5e-28 129.8 119 59.7
Ah.10g026170 Amaranthus hybridus HOM05D005102 ORTHO05D006090 1.9e-28 129.4 122 61.5
AL3G39760 Arabidopsis lyrata HOM05D005102 ORTHO05D006090 1.9e-28 129.4 119 61.3
BraA03t13497Z Brassica rapa HOM05D005102 ORTHO05D006090 1.9e-28 129.4 121 57.9
Sp3g22120 Schrenkiella parvula HOM05D005102 ORTHO05D006090 2.5e-28 129.0 121 57.0
CARHR100410 Cardamine hirsuta HOM05D005102 ORTHO05D006090 4.2e-28 128.3 120 60.8
EL10Ac3g06678 Beta vulgaris HOM05D005102 ORTHO05D006090 9.4e-28 127.1 121 59.5
A03p43600 Brassica napus HOM05D005102 ORTHO05D006090 9.4e-28 127.1 119 57.1
PSO170G5569 Papaver somniferum HOM05D005102 ORTHO05D006090 9.4e-28 127.1 119 58.0
ClCG06G002570 Citrullus lanatus HOM05D005102 ORTHO05D006090 1.2e-27 126.7 112 64.3
Sc13g0003090 Simmondsia chinensis HOM05D005102 ORTHO05D006090 1.2e-27 126.7 119 63.0
MELO3C022272.2 Cucumis melo HOM05D005102 ORTHO05D006090 2.1e-27 125.9 82 82.9
VMungo0540G0767 Vigna mungo HOM05D005102 ORTHO05D006090 2.7e-27 125.6 95 67.4
PSO302G0040 Papaver somniferum HOM05D005102 ORTHO05D006090 3.6e-27 125.2 119 57.1
CiPaw.02G105900 Carya illinoinensis HOM05D005102 ORTHO05D006090 1.4e-26 123.2 98 64.3
AUR62018036 Chenopodium quinoa HOM05D005102 ORTHO05D006090 1.4e-26 123.2 95 70.5
Hund22254 Selenicereus undatus HOM05D005102 ORTHO05D006090 1.8e-26 122.9 111 63.1
AUR62015240 Chenopodium quinoa HOM05D005102 ORTHO05D006090 4.0e-26 121.7 122 59.8
Carub.0003s2465 Capsella rubella HOM05D005102 ORTHO05D006090 2.0e-25 119.4 119 58.8
Lsat_1_v5_gn_1_75501 Lactuca sativa HOM05D005102 ORTHO05D006090 5.3e-23 111.3 92 65.2
SHI00826 Sapria himalayana HOM05D005102 ORTHO05D006090 7.0e-23 110.9 81 74.1
Os02g0658900 Oryza sativa ssp. japonica HOM05D005102 ORTHO05D006090 9.1e-23 110.5 119 52.9
SGA_v2.0_scaffold127G34013 Striga asiatica HOM05D005102 ORTHO05D006090 1.6e-22 109.8 121 58.7
Zm00001eb238020 Zea mays HOM05D005102 ORTHO05D006090 2.7e-22 109.0 99 61.6
HPP92_021768 Vanilla planifolia HOM05D005102 ORTHO05D006090 3.5e-22 108.6 77 70.1
ATR0787G185 Amborella trichopoda HOM05D005102 ORTHO05D006090 1.3e-21 106.7 77 70.1
CDE09G0962 Ceratophyllum demersum HOM05D005102 ORTHO05D006090 3.8e-21 105.1 90 61.1
SEGI_01035 Sequoiadendron giganteum HOM05D005102 ORTHO05D006090 1.5e-20 103.2 76 67.1
CsaV3_6G008560 Cucumis sativus L. HOM05D005102 ORTHO05D006090 7.2e-20 100.9 64 82.8
CDE02G3615 Ceratophyllum demersum HOM05D005102 ORTHO05D006090 1.2e-19 100.1 86 60.5
SGA_v2.0_scaffold454G51888 Striga asiatica HOM05D005102 ORTHO05D006090 1.1e-15 87.0 119 50.4
AagrBONN_evm.TU.Sc2ySwM_228.1541 Anthoceros agrestis HOM05D005102 ORTHO05D006090 2.2e-13 79.3 69 55.1
AagrBONN_evm.TU.Sc2ySwM_368.1701 Anthoceros agrestis HOM05D005102 ORTHO05D006090 2.9e-13 79.0 69 55.1
vmacro20979 Vaccinium macrocarpon HOM05D005102 ORTHO05D006090 2.9e-13 79.0 129 42.6
TWI63G1490 Tripterygium wilfordii HOM05D005102 ORTHO05D006090 2.1e-11 72.8 57 70.2
SGA_v2.0_scaffold193G40717 Striga asiatica HOM05D005102 ORTHO05D006090 1.4e-10 70.1 40 85.0
Gohir.D02G049200 Gossypium hirsutum HOM05D005102 ORTHO05D006090 8.8e-10 67.4 53 67.9
CBR_g37523 Chara braunii HOM05D005102 ORTHO05D006090 1.2e-09 67.0 61 55.7
Mapoly0019s0137 Marchantia polymorpha HOM05D005102 ORTHO05D006090 1.1e-07 60.5 68 48.5


User provided reference genes

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