Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G00498 Eucalyptus grandis HOM05D000665 ORTHO05D000285 9.0e-53 209.9 101 100.0
Eucgr.E03640 Eucalyptus grandis HOM05D000665 ORTHO05D000285 1.6e-30 136.0 84 76.2
Eucgr.H04051 Eucalyptus grandis HOM05D000665 ORTHO05D000285 2.8e-30 135.2 94 71.3
Eucgr.K00902 Eucalyptus grandis HOM05D000665 ORTHO05D000285 3.7e-30 134.8 84 76.2
Eucgr.B02483 Eucalyptus grandis HOM05D000665 ORTHO05D000285 4.2e-26 121.3 83 65.1
Eucgr.F03745 Eucalyptus grandis HOM05D000665 ORTHO05D000285 1.6e-25 119.4 84 64.3
Eucgr.C01733 Eucalyptus grandis HOM05D000665 ORTHO05D000285 2.7e-25 118.6 93 58.1
Eucgr.F01358 Eucalyptus grandis HOM05D000665 ORTHO05D000285 3.6e-25 118.2 93 57.0
Eucgr.I00904 Eucalyptus grandis HOM05D000665 ORTHO05D000285 6.1e-25 117.5 84 60.7
Eucgr.B02958 Eucalyptus grandis HOM05D000665 ORTHO05D000285 7.9e-25 117.1 84 63.1
Eucgr.L02702 Eucalyptus grandis HOM05D000665 ORTHO05D000285 1.4e-24 116.3 93 55.9
Eucgr.E03604 Eucalyptus grandis HOM05D000665 ORTHO05D000285 2.0e-23 112.5 84 57.1
Eucgr.K03150 Eucalyptus grandis HOM05D000665 ORTHO05D000285 4.3e-23 111.3 85 57.6
Eucgr.L02923 Eucalyptus grandis HOM05D000665 ORTHO05D000285 5.7e-23 110.9 93 51.6
Eucgr.B02784 Eucalyptus grandis HOM05D000665 ORTHO05D000285 7.4e-23 110.5 95 55.8
Eucgr.L00423 Eucalyptus grandis HOM05D000665 ORTHO05D000285 2.8e-22 108.6 95 53.7
Eucgr.K03095 Eucalyptus grandis HOM05D000665 ORTHO05D000921 1.5e-15 86.3 74 54.1
Eucgr.G02213 Eucalyptus grandis HOM05D000665 ORTHO05D000285 1.4e-13 79.7 84 42.9
Eucgr.J02681 Eucalyptus grandis HOM05D000665 ORTHO05D000921 3.5e-12 75.1 55 58.2
QL01p020889 Quercus lobata HOM05D000665 ORTHO05D000921 5.0e-11 71.2 100 38.0
CSS0000387 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 7.2e-10 67.4 84 36.9
CSS0041063 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 7.2e-10 67.4 84 36.9
TAR626G0805 Trochodendron aralioides HOM05D000665 ORTHO05D000285 7.2e-10 67.4 92 40.2
CSS0047450 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.2e-09 66.6 84 36.9
CSS0007077 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.1e-09 65.9 84 34.5
CSS0049933 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.7e-09 65.5 84 38.1
Dinv02799 Davidia involucrata HOM05D000665 ORTHO05D000921 6.1e-09 64.3 78 39.7
CSS0004715 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 8.0e-09 63.9 84 35.7
CSS0029683 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 8.0e-09 63.9 84 35.7
TAR629G1791 Trochodendron aralioides HOM05D000665 ORTHO05D000921 8.0e-09 63.9 82 41.5
RcHm_v2.0_Chr6g0302651 Rosa chinensis HOM05D000665 ORTHO05D000140 1.8e-08 62.8 86 37.2
Ciclev10006620m.g Citrus clementina HOM05D003171 ORTHO05D000921 3.0e-08 62.0 91 33.0
FAN27G2099 Fragaria x ananassa HOM05D000665 ORTHO05D000140 3.0e-08 62.0 86 37.2
MBI14_g08099_MAGBIO Magnolia biondii HOM05D004103 ORTHO05D005242 3.0e-08 62.0 74 40.5
FvH4_2g38660 Fragaria vesca HOM05D000665 ORTHO05D000140 4.0e-08 61.6 86 37.2
Nn3g16139 Nelumbo nucifera HOM05D000665 ORTHO05D000285 4.0e-08 61.6 80 43.8
Nn3g20404 Nelumbo nucifera HOM05D000665 ORTHO05D000285 4.0e-08 61.6 80 43.8
Ciclev10018241m.g Citrus clementina HOM05D003171 ORTHO05D000921 6.7e-08 60.8 92 31.5
Dinv39109 Davidia involucrata HOM05D000665 ORTHO05D000921 8.8e-08 60.5 78 35.9
Gohir.D08G228100 Gossypium hirsutum HOM05D000665 ORTHO05D000140 8.8e-08 60.5 94 33.0
Gorai.004G242300 Gossypium raimondii HOM05D000665 ORTHO05D000140 8.8e-08 60.5 94 33.0
TWI12G0661 Tripterygium wilfordii HOM05D000665 ORTHO05D003147 8.8e-08 60.5 86 34.9
Dinv43770 Davidia involucrata HOM05D000665 ORTHO05D000921 1.1e-07 60.1 77 37.7
FAN15G1296 Fragaria x ananassa HOM05D000665 ORTHO05D003147 1.1e-07 60.1 86 36.0
Aqoxy5G00628 Aquilegia oxysepala HOM05D000665 ORTHO05D003147 1.5e-07 59.7 92 35.9
PSO541G5140 Papaver somniferum HOM05D000665 ORTHO05D003147 1.5e-07 59.7 84 38.1
PSO675G7404 Papaver somniferum HOM05D000665 ORTHO05D003147 1.5e-07 59.7 92 34.8
Hund30880 Selenicereus undatus HOM05D000876 ORTHO05D000285 1.5e-07 59.7 85 32.9
Hund14971 Selenicereus undatus HOM05D000876 ORTHO05D000285 2.0e-07 59.3 85 32.9
Hund23719 Selenicereus undatus HOM05D000876 ORTHO05D000285 2.0e-07 59.3 85 32.9
Nn5g29893 Nelumbo nucifera HOM05D000665 ORTHO05D000140 2.6e-07 58.9 91 30.8
CSS0009073 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 3.3e-07 58.5 76 34.2
Ciclev10033776m.g Citrus clementina HOM05D003171 ORTHO05D000921 3.3e-07 58.5 91 30.8
Dinv03607 Davidia involucrata HOM05D000665 ORTHO05D000921 4.4e-07 58.2 80 35.0
Nn1g02527 Nelumbo nucifera HOM05D000665 ORTHO05D000921 4.4e-07 58.2 85 37.6
Psat0s2829g0240 Pisum sativum HOM05D011477 ORTHO05D000285 4.4e-07 58.2 69 42.0
Psat0s3845g0040 Pisum sativum HOM05D011477 ORTHO05D000285 4.4e-07 58.2 69 42.0
Dinv16127 Davidia involucrata HOM05D007209 ORTHO05D000921 5.7e-07 57.8 74 37.8
Psat5g185160 Pisum sativum HOM05D011477 ORTHO05D000285 5.7e-07 57.8 74 41.9
COL.COLO4_25265 Corchorus olitorius HOM05D007209 ORTHO05D000921 7.5e-07 57.4 62 41.9
TAR362G0679 Trochodendron aralioides HOM05D000665 ORTHO05D000140 7.5e-07 57.4 94 34.0
TAR381G0952 Trochodendron aralioides HOM05D000665 ORTHO05D003147 7.5e-07 57.4 84 35.7
HanXRQChr03g0084731 Helianthus annuus HOM05D000665 ORTHO05D000140 2.2e-06 55.8 94 33.0
Hma1.2p1_1362F.1_g278230 Hydrangea macrophylla HOM05D000665 ORTHO05D000140 2.2e-06 55.8 92 31.5
QL06p051064 Quercus lobata HOM05D000665 ORTHO05D003147 2.2e-06 55.8 84 34.5
Hund21358 Selenicereus undatus HOM05D000876 ORTHO05D000285 2.2e-06 55.8 73 34.2
arahy.Tifrunner.gnm1.ann1.2911W9 Arachis hypogaea HOM05D000876 ORTHO05D000285 2.8e-06 55.5 77 36.4
COL.COLO4_20107 Corchorus olitorius HOM05D007209 ORTHO05D000921 2.8e-06 55.5 72 37.5
MELO3C030897.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.8e-06 55.5 70 42.9
COL.COLO4_18963 Corchorus olitorius HOM05D000665 ORTHO05D000140 3.7e-06 55.1 94 35.1
Medtr8g054100 Medicago truncatula HOM05D000876 ORTHO05D000285 3.7e-06 55.1 75 37.3
CiPaw.07G231300 Carya illinoinensis HOM05D000665 ORTHO05D000140 4.8e-06 54.7 101 33.7
Ciclev10013716m.g Citrus clementina HOM05D003171 ORTHO05D000921 4.8e-06 54.7 78 33.3
FvH4_7g00340 Fragaria vesca HOM05D003171 ORTHO05D000921 4.8e-06 54.7 88 31.8
Nn5g30764 Nelumbo nucifera HOM05D000665 ORTHO05D003147 4.8e-06 54.7 86 33.7
Prupe.8G054800 Prunus persica HOM05D003171 ORTHO05D000921 4.8e-06 54.7 87 33.3
Hund23629 Selenicereus undatus HOM05D000876 ORTHO05D000285 4.8e-06 54.7 73 34.2
CANSAT64G2197 Cannabis sativa HOM05D003171 ORTHO05D000921 6.3e-06 54.3 87 29.9
Dinv10284 Davidia involucrata HOM05D000665 ORTHO05D000140 6.3e-06 54.3 94 33.0
Lsat_1_v5_gn_6_77601 Lactuca sativa HOM05D000665 ORTHO05D000140 6.3e-06 54.3 94 34.0
Lj7C736T17 Lonicera japonica HOM05D000665 ORTHO05D000140 6.3e-06 54.3 94 35.1
TAR383G0921 Trochodendron aralioides HOM05D000665 ORTHO05D000140 6.3e-06 54.3 101 31.7
Zm00001eb217070 Zea mays HOM05D000876 ORTHO05D000285 6.3e-06 54.3 86 34.9
arahy.Tifrunner.gnm1.ann1.7Y6611 Arachis hypogaea HOM05D000034 ORTHO05D000037 8.2e-06 53.9 77 35.1
MSTRG.25827 Avicennia marina HOM05D000665 ORTHO05D000140 8.2e-06 53.9 101 32.7
Duzib138G0087 Durio zibethinus HOM05D000665 ORTHO05D000140 8.2e-06 53.9 101 30.7
HanXRQChr05g0143471 Helianthus annuus HOM05D000876 ORTHO05D000285 8.2e-06 53.9 84 36.9
Medtr5g055390 Medicago truncatula HOM05D000876 ORTHO05D000285 8.2e-06 53.9 70 38.6
Potri.006G265900 Populus trichocarpa HOM05D000665 ORTHO05D000140 8.2e-06 53.9 101 32.7
Sabra06G0208500 Salix brachista HOM05D000665 ORTHO05D000140 8.2e-06 53.9 101 32.7
Sed0011521 Sechium edule HOM05D007209 ORTHO05D000921 8.2e-06 53.9 88 35.2
GSVIVG01000025001 Vitis vinifera HOM05D000665 ORTHO05D000140 8.2e-06 53.9 102 32.4


User provided reference genes

Program Settings