Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G00468 Eucalyptus grandis HOM05D005911 ORTHO05D007565 2.3e-128 462.2 234 100.0
Eucgr.G01900 Eucalyptus grandis HOM05D005911 ORTHO05D007565 1.8e-67 260.0 163 84.7
Eucgr.G00462 Eucalyptus grandis HOM05D005911 ORTHO05D007565 3.0e-67 259.2 163 84.0
CiPaw.06G137300 Carya illinoinensis HOM05D005911 ORTHO05D007565 8.2e-41 171.4 342 35.1
Potri.004G152100 Populus trichocarpa HOM05D005911 ORTHO05D007565 5.9e-39 165.2 341 33.7
Manes.17G099400 Manihot esculenta HOM05D005911 ORTHO05D007565 1.7e-38 163.7 159 54.7
Cfa005027 Carpinus fangiana HOM05D005911 ORTHO05D007565 2.5e-37 159.8 339 34.2
MD10G1080400 Malus domestica HOM05D005911 ORTHO05D007565 9.4e-37 157.9 345 31.9
Atru.chr5.2957 Acer truncatum HOM05D005911 ORTHO05D007565 1.6e-36 157.1 341 33.1
Dinv42087 Davidia involucrata HOM05D005911 ORTHO05D007565 3.6e-36 156.0 357 30.3
QL11p042848 Quercus lobata HOM05D005911 ORTHO05D007565 3.6e-36 156.0 339 34.8
GSVIVG01024153001 Vitis vinifera HOM05D005911 ORTHO05D007565 7.9e-36 154.8 342 31.3
Haze_02358 Corylus avellana HOM05D005911 ORTHO05D009502 1.0e-35 154.5 161 50.3
CSS0013374 Camellia sinensis var. sinensis HOM05D005911 ORTHO05D007565 2.3e-35 153.3 357 30.3
Actinidia17824 Actinidia chinensis HOM05D005911 ORTHO05D007565 1.1e-34 151.0 344 31.7
Sabra04G0100900 Salix brachista HOM05D005911 ORTHO05D007565 1.5e-34 150.6 154 53.2
Gohir.A04G104400 Gossypium hirsutum HOM05D005911 ORTHO05D007565 2.0e-34 150.2 293 35.2
Cpa.g.sc62.118 Carica papaya HOM05D005911 ORTHO05D007565 2.6e-34 149.8 342 32.7
Hma1.2p1_0066F.1_g036670 Hydrangea macrophylla HOM05D005911 ORTHO05D007565 2.6e-34 149.8 170 44.7
TWI31G0066 Tripterygium wilfordii HOM05D005911 ORTHO05D007565 7.4e-34 148.3 341 32.8
TPR.G20990 Trifolium pratense HOM05D005911 ORTHO05D007565 1.3e-33 147.5 153 49.7
FvH4_2g08380 Fragaria vesca HOM05D005911 ORTHO05D007565 1.7e-33 147.1 345 31.9
Lj4g0018405 Lotus japonicus HOM05D005911 ORTHO05D007565 1.7e-33 147.1 157 48.4
FAN24G3462 Fragaria x ananassa HOM05D005911 ORTHO05D007565 2.8e-33 146.4 345 31.9
Aqoxy5G01675 Aquilegia oxysepala HOM05D005911 ORTHO05D007565 3.7e-33 146.0 339 31.0
arahy.Tifrunner.gnm1.ann1.CA4G6V Arachis hypogaea HOM05D005911 ORTHO05D007565 6.3e-33 145.2 345 32.2
Prupe.8G101700 Prunus persica HOM05D005911 ORTHO05D007565 6.3e-33 145.2 159 49.1
Lalb_Chr16g0385211 Lupinus albus HOM05D005911 ORTHO05D007565 8.2e-33 144.8 161 46.0
Medtr4g084100 Medicago truncatula HOM05D005911 ORTHO05D007565 1.1e-32 144.4 152 49.3
PGR042G3082 Punica granatum HOM05D005911 ORTHO05D009502 1.1e-32 144.4 159 50.3
Rhsim05G0076000 Rhododendron simsii HOM05D005911 ORTHO05D007565 1.8e-32 143.7 154 48.7
TAR628G1003 Trochodendron aralioides HOM05D005911 ORTHO05D007565 1.8e-32 143.7 151 49.0
FAN20G0571 Fragaria x ananassa HOM05D005911 ORTHO05D007565 2.4e-32 143.3 341 31.1
Thecc.02G123100 Theobroma cacao HOM05D005911 ORTHO05D007565 2.4e-32 143.3 156 48.1
EL10Ac9g21750 Beta vulgaris HOM05D005911 ORTHO05D007565 3.1e-32 142.9 159 45.3
RcHm_v2.0_Chr6g0263461 Rosa chinensis HOM05D005911 ORTHO05D007565 3.1e-32 142.9 355 30.7
Psat3g133040 Pisum sativum HOM05D005911 ORTHO05D007565 5.3e-32 142.1 154 48.7
Sed0023974 Sechium edule HOM05D005911 ORTHO05D007565 5.3e-32 142.1 347 29.7
FAN15G1485 Fragaria x ananassa HOM05D005911 ORTHO05D007565 7.0e-32 141.7 343 31.2
Phvul.007G233200 Phaseolus vulgaris HOM05D005911 ORTHO05D007565 7.0e-32 141.7 160 47.5
Gohir.D04G144200 Gossypium hirsutum HOM05D005911 ORTHO05D007565 9.1e-32 141.4 150 48.0
Gorai.012G129800 Gossypium raimondii HOM05D005911 ORTHO05D007565 9.1e-32 141.4 150 48.0
Glyma.20G019800 Glycine max HOM05D005911 ORTHO05D007565 1.2e-31 141.0 151 49.0
MBI16_g17455_MAGBIO Magnolia biondii HOM05D005911 ORTHO05D007565 1.6e-31 140.6 346 30.3
vmacro19435 Vaccinium macrocarpon HOM05D005911 ORTHO05D007565 2.6e-31 139.8 164 45.7
COL.COLO4_32449 Corchorus olitorius HOM05D005911 ORTHO05D007565 3.5e-31 139.4 159 48.4
Ca_18760_v3 Cicer arietinum L. HOM05D005911 ORTHO05D007565 5.9e-31 138.7 153 47.1
Nn1g05068 Nelumbo nucifera HOM05D005911 ORTHO05D007565 5.0e-30 135.6 342 28.9
Duzib248G0238 Durio zibethinus HOM05D005911 ORTHO05D007565 1.9e-29 133.7 154 46.8
VMungo0720G1659 Vigna mungo HOM05D005911 ORTHO05D007565 1.9e-29 133.7 160 45.0
Ah.01g006180 Amaranthus hybridus HOM05D002934 ORTHO05D003937 4.2e-29 132.5 153 44.4
AUR62011353 Chenopodium quinoa HOM05D005911 ORTHO05D007565 4.2e-29 132.5 151 43.7
Nitab4.5_0000443g0010 Nicotiana tabacum HOM05D005911 ORTHO05D007565 1.2e-28 131.0 228 36.0
Solyc01g109450.3 Solanum lycopersicum HOM05D005911 ORTHO05D007565 1.6e-28 130.6 159 44.7
Nitab4.5_0008989g0030 Nicotiana tabacum HOM05D005911 ORTHO05D007565 2.1e-28 130.2 151 45.7
Cc02_g17800 Coffea canephora HOM05D005911 ORTHO05D007565 2.7e-28 129.8 153 44.4
Sopen01g051640 Solanum pennellii HOM05D005911 ORTHO05D007565 2.7e-28 129.8 159 44.7
Hund00288 Selenicereus undatus HOM05D005911 ORTHO05D007565 3.6e-28 129.4 151 44.4
CARHR039340 Cardamine hirsuta HOM05D005911 ORTHO05D007565 4.7e-28 129.0 163 47.2
unitig_22.g6840 Utricularia gibba HOM05D005911 ORTHO05D007565 4.7e-28 129.0 284 33.8
AUR62016709 Chenopodium quinoa HOM05D005911 ORTHO05D007565 8.0e-28 128.3 151 41.7
MELO3C012560.2 Cucumis melo HOM05D005911 ORTHO05D007565 8.0e-28 128.3 163 44.8
CsaV3_7G023300 Cucumis sativus L. HOM05D005911 ORTHO05D007565 1.0e-27 127.9 340 29.1
Nitab4.5_0001794g0010 Nicotiana tabacum HOM05D005911 ORTHO05D007565 1.0e-27 127.9 151 45.7
PGSC0003DMG400025190 Solanum tuberosum HOM05D005911 ORTHO05D007565 1.0e-27 127.9 159 44.7
Oeu014335.1 Olea europaea HOM05D005911 ORTHO05D007565 1.4e-27 127.5 151 47.0
Lj9A367G52 Lonicera japonica HOM05D005911 ORTHO05D007565 2.3e-27 126.7 150 44.7
Peaxi162Scf00016g00941 Petunia axillaris HOM05D005911 ORTHO05D007565 2.3e-27 126.7 152 44.7
CAN.G322.116 Capsicum annuum HOM05D005911 ORTHO05D007565 3.0e-27 126.3 151 45.7
DCAR_003638 Daucus carota HOM05D005911 ORTHO05D007565 3.0e-27 126.3 153 43.1
Carub.0001s3853 Capsella rubella HOM05D005911 ORTHO05D007565 4.0e-27 125.9 162 46.9
ClCG02G005220 Citrullus lanatus HOM05D005911 ORTHO05D007565 4.0e-27 125.9 340 28.8
Sp1g36210 Schrenkiella parvula HOM05D005911 ORTHO05D007565 2.6e-26 123.2 166 44.6
AL1G56510 Arabidopsis lyrata HOM05D003089 ORTHO05D003544 4.4e-26 122.5 166 44.0
Thhalv10011559m.g Eutrema salsugineum HOM05D005911 ORTHO05D007565 4.4e-26 122.5 161 43.5
A05p20650 Brassica napus HOM05D005911 ORTHO05D007565 2.8e-25 119.8 147 44.9
THA.LOC104804910 Tarenaya hassleriana HOM05D005911 ORTHO05D007565 8.2e-25 118.2 165 41.8
Sc14g0001910 Simmondsia chinensis HOM05D005911 ORTHO05D007565 1.1e-24 117.9 203 35.0
AT1G49350 Arabidopsis thaliana HOM05D005911 ORTHO05D007565 1.4e-24 117.5 161 42.9
ATR0733G150 Amborella trichopoda HOM05D005911 ORTHO05D007565 4.1e-24 115.9 157 42.0
arahy.Tifrunner.gnm1.ann1.IUSJ9T Arachis hypogaea HOM05D005911 ORTHO05D007565 4.1e-24 115.9 204 38.7
BcaC05g27521 Brassica carinata HOM05D005911 ORTHO05D007565 5.3e-24 115.5 147 43.5
C05p34970 Brassica napus HOM05D005911 ORTHO05D007565 5.3e-24 115.5 147 43.5
BolC5t32198H Brassica oleracea HOM05D005911 ORTHO05D007565 5.3e-24 115.5 147 43.5
ECA236G0345 Erigeron canadensis HOM05D005911 ORTHO05D007565 5.3e-24 115.5 153 45.8
Lsat_1_v5_gn_7_89660 Lactuca sativa HOM05D005911 ORTHO05D007565 5.3e-24 115.5 314 30.3
MSTRG.20102 Avicennia marina HOM05D005911 ORTHO05D007565 7.0e-24 115.2 151 41.1
BolC5t32220H Brassica oleracea HOM05D005911 ORTHO05D007565 7.0e-24 115.2 147 43.5
SGA_v2.0_scaffold55G19804 Striga asiatica HOM05D005911 ORTHO05D007565 9.1e-24 114.8 154 42.9
Sc14g0001790 Simmondsia chinensis HOM05D005911 ORTHO05D007565 1.2e-23 114.4 202 35.1
BraA05t20973Z Brassica rapa HOM05D005911 ORTHO05D007565 1.6e-23 114.0 147 42.2
BcaB02g11057 Brassica carinata HOM05D005911 ORTHO05D007565 3.5e-23 112.8 168 40.5
C05p34650 Brassica napus HOM05D005911 ORTHO05D007565 3.5e-23 112.8 147 42.9
AL1G56310 Arabidopsis lyrata HOM05D005911 ORTHO05D007565 4.5e-23 112.5 152 42.1
A05p20720 Brassica napus HOM05D005911 ORTHO05D007565 4.5e-23 112.5 147 42.2
BraA05t20979Z Brassica rapa HOM05D005911 ORTHO05D007565 4.5e-23 112.5 147 42.2
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 5.9e-23 112.1 155 43.2
CAN.G149.23 Capsicum annuum HOM05D005911 ORTHO05D007565 7.7e-23 111.7 166 38.6
Migut.N01227 Erythranthe guttata HOM05D005911 ORTHO05D007565 7.7e-23 111.7 151 39.7
SGA_v2.0_scaffold44G16630 Striga asiatica HOM05D005911 ORTHO05D007565 2.2e-22 110.2 165 40.0
BcaC05g27500 Brassica carinata HOM05D005911 ORTHO05D007565 1.1e-21 107.8 147 41.5
SalBow3G0191 Salvia bowleyana HOM05D005911 ORTHO05D007565 1.6e-20 104.0 153 40.5
HanXRQChr16g0504971 Helianthus annuus HOM05D005911 ORTHO05D007565 3.6e-20 102.8 154 42.9
Zm00001eb346550 Zea mays HOM05D005911 ORTHO05D007565 6.1e-20 102.1 163 36.2
Os05g0185700 Oryza sativa ssp. japonica HOM05D005911 ORTHO05D007565 8.0e-20 101.7 162 37.0
SEGI_31956 Sequoiadendron giganteum HOM05D005911 ORTHO05D007565 3.4e-18 96.3 350 26.9
TAR371G0586 Trochodendron aralioides HOM05D005911 ORTHO05D007565 3.7e-17 92.8 137 40.9
Ciclev10029888m.g Citrus clementina HOM05D005911 ORTHO05D007565 4.1e-16 89.4 282 27.3
CDE02G3889 Ceratophyllum demersum HOM05D005911 ORTHO05D007565 2.7e-15 86.7 236 31.8
TAR371G0927 Trochodendron aralioides HOM05D005911 ORTHO05D007565 1.9e-13 80.5 108 40.7
Potri.004G151600 Populus trichocarpa HOM05D005911 ORTHO05D007565 2.5e-13 80.1 268 26.9
CARHR039370 Cardamine hirsuta HOM05D005911 ORTHO05D007565 4.2e-13 79.3 97 44.3
FAN27G2671 Fragaria x ananassa HOM05D005911 ORTHO05D007565 7.2e-13 78.6 226 28.3
Eucgr.G01892 Eucalyptus grandis HOM05D005911 ORTHO05D007565 6.8e-11 72.0 50 70.0
Ciclev10013569m.g Citrus clementina HOM05D005911 ORTHO05D007565 2.2e-09 67.0 39 74.4
Ciclev10003801m.g Citrus clementina HOM05D005911 ORTHO05D007565 4.9e-09 65.9 45 64.4
Lj9A367G53 Lonicera japonica HOM05D005911 ORTHO05D007565 1.2e-07 61.2 40 67.5
Ciclev10018182m.g Citrus clementina HOM05D005911 ORTHO05D007565 1.0e-06 58.2 35 71.4
Mapoly0044s0080 Marchantia polymorpha HOM05D005911 ORTHO05D007565 1.3e-06 57.8 150 27.3
AagrBONN_evm.TU.Sc2ySwM_117.291 Anthoceros agrestis HOM05D005911 ORTHO05D007565 5.0e-06 55.8 142 34.5


User provided reference genes

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