Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G00347 Eucalyptus grandis HOM05D000113 ORTHO05D005835 2.3e-247 858.6 477 100.0
CiPaw.06G173200 Carya illinoinensis HOM05D000113 ORTHO05D005835 4.3e-121 439.1 491 51.7
Cfa004507 Carpinus fangiana HOM05D003925 ORTHO05D005835 1.3e-120 437.6 493 52.1
RcHm_v2.0_Chr7g0209021 Rosa chinensis HOM05D000113 ORTHO05D005835 1.4e-119 434.1 535 52.5
FvH4_5g21580 Fragaria vesca HOM05D000113 ORTHO05D005835 3.1e-119 433.0 537 48.8
FAN18G0136 Fragaria x ananassa HOM05D000113 ORTHO05D005835 1.2e-118 431.0 534 48.7
FAN04G1601 Fragaria x ananassa HOM05D000113 ORTHO05D005835 5.8e-118 428.7 534 49.8
FAN08G0819 Fragaria x ananassa HOM05D000113 ORTHO05D005835 1.3e-117 427.6 531 48.0
PGR042G0228 Punica granatum HOM05D000113 ORTHO05D005835 2.2e-117 426.8 527 50.1
Prupe.1G577400 Prunus persica HOM05D000113 ORTHO05D005835 1.4e-116 424.1 528 50.6
MD15G1433800 Malus domestica HOM05D000113 ORTHO05D005835 2.4e-116 423.3 491 52.3
Thecc.02G023600 Theobroma cacao HOM05D000113 ORTHO05D005835 2.7e-115 419.9 495 49.7
CANSAT54G2975 Cannabis sativa HOM05D000113 ORTHO05D005835 6.0e-115 418.7 495 51.3
Ciclev10000030m.g Citrus clementina HOM05D000113 ORTHO05D005835 1.9e-113 413.7 496 49.6
COL.COLO4_17738 Corchorus olitorius HOM05D000113 ORTHO05D005835 1.3e-112 411.0 534 49.3
Gohir.D01G173900 Gossypium hirsutum HOM05D000113 ORTHO05D005835 4.8e-112 409.1 534 48.9
Manes.10G119700 Manihot esculenta HOM05D000113 ORTHO05D005835 6.9e-111 405.2 499 50.1
Potri.004G222900 Populus trichocarpa HOM05D000113 ORTHO05D005835 9.0e-111 404.8 498 49.6
Gorai.002G216000 Gossypium raimondii HOM05D000113 ORTHO05D005835 1.2e-110 404.4 499 48.1
GSVIVG01023271001 Vitis vinifera HOM05D000113 ORTHO05D005835 5.5e-108 395.6 495 48.1
TWI59G0289 Tripterygium wilfordii HOM05D000113 ORTHO05D005835 7.1e-108 395.2 487 50.7
Sed0015728 Sechium edule HOM05D000113 ORTHO05D005835 2.1e-107 393.7 532 48.3
Glyma.17G001100 Glycine max HOM05D000113 ORTHO05D005835 3.0e-106 389.8 490 49.6
TAR381G0519 Trochodendron aralioides HOM05D000113 ORTHO05D005835 5.1e-106 389.0 506 47.8
CSS0005911 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005835 1.1e-105 387.9 496 49.8
Sabra01G0168800 Salix brachista HOM05D000113 ORTHO05D005835 1.9e-105 387.1 499 47.7
arahy.Tifrunner.gnm1.ann1.F0MMCG Arachis hypogaea HOM05D000113 ORTHO05D005835 5.6e-105 385.6 510 48.0
Gohir.A01G182800 Gossypium hirsutum HOM05D000113 ORTHO05D005835 1.6e-104 384.0 534 48.3
TPR.G5965 Trifolium pratense HOM05D000113 ORTHO05D005835 8.1e-104 381.7 502 48.0
arahy.Tifrunner.gnm1.ann1.NM6SG7 Arachis hypogaea HOM05D000113 ORTHO05D005835 1.4e-103 380.9 510 47.8
Psat4g000920 Pisum sativum HOM05D000113 ORTHO05D005835 4.0e-103 379.4 538 46.1
CSS0010677 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005835 5.3e-103 379.0 495 49.1
CsaV3_3G019320 Cucumis sativus L. HOM05D000113 ORTHO05D005835 1.5e-102 377.5 556 46.4
Actinidia39011 Actinidia chinensis HOM05D000113 ORTHO05D005835 2.0e-102 377.1 502 45.6
Phvul.003G075000 Phaseolus vulgaris HOM05D000113 ORTHO05D005835 2.0e-102 377.1 503 48.3
Lj5C262G4 Lonicera japonica HOM05D003925 ORTHO05D005835 3.4e-102 376.3 473 48.2
MELO3C019423.2 Cucumis melo HOM05D000113 ORTHO05D005835 2.2e-101 373.6 556 45.5
ClCG05G009410 Citrullus lanatus HOM05D000113 ORTHO05D005835 3.8e-101 372.9 525 45.7
Migut.B00785 Erythranthe guttata HOM05D000113 ORTHO05D005835 3.8e-101 372.9 534 45.1
Lsat_1_v5_gn_9_120661 Lactuca sativa HOM05D000113 ORTHO05D005835 6.5e-101 372.1 487 47.2
Oeu058638.1 Olea europaea HOM05D000113 ORTHO05D005835 2.1e-99 367.1 494 47.6
Sopen01g046100 Solanum pennellii HOM05D000113 ORTHO05D005835 2.1e-99 367.1 491 46.2
MSTRG.16496 Avicennia marina HOM05D000113 ORTHO05D005835 3.5e-99 366.3 494 47.2
DCAR_029273 Daucus carota HOM05D000113 ORTHO05D005835 7.9e-99 365.2 532 46.6
SGA_v2.0_scaffold272G46375 Striga asiatica HOM05D000113 ORTHO05D005835 1.8e-98 364.0 496 46.0
Aa31LG2G11010 Aethionema arabicum HOM05D000113 ORTHO05D005835 2.3e-98 363.6 495 45.9
HanXRQChr03g0065101 Helianthus annuus HOM05D000113 ORTHO05D005835 3.0e-98 363.2 501 46.1
Medtr4g134790 Medicago truncatula HOM05D000113 ORTHO05D005835 6.7e-98 362.1 510 47.6
AL2G17950 Arabidopsis lyrata HOM05D000113 ORTHO05D005835 1.5e-97 360.9 494 46.4
Sc07g0004580 Simmondsia chinensis HOM05D000113 ORTHO05D005835 1.9e-97 360.5 526 46.0
Sp2g05520 Schrenkiella parvula HOM05D000113 ORTHO05D005835 4.3e-97 359.4 492 45.7
Solyc01g103690.4 Solanum lycopersicum HOM05D000113 ORTHO05D005835 9.6e-97 358.2 490 45.3
Carub.0002s0657 Capsella rubella HOM05D000113 ORTHO05D005835 1.3e-96 357.8 489 45.4
Nitab4.5_0000948g0060 Nicotiana tabacum HOM05D000113 ORTHO05D005835 1.3e-96 357.8 489 45.0
Ca_13538_v3 Cicer arietinum L. HOM05D000113 ORTHO05D005835 1.6e-96 357.5 503 46.9
AT1G58060 Arabidopsis thaliana HOM05D000113 ORTHO05D005835 2.1e-96 357.1 497 46.1
CAN.G798.54 Capsicum annuum HOM05D000113 ORTHO05D005835 2.1e-96 357.1 489 45.0
ECA240G0867 Erigeron canadensis HOM05D000113 ORTHO05D005835 2.1e-96 357.1 487 44.8
C09p23220 Brassica napus HOM05D000113 ORTHO05D005835 3.7e-96 356.3 487 45.8
BolC9t55241H Brassica oleracea HOM05D000113 ORTHO05D005835 3.7e-96 356.3 487 45.8
A09p18610 Brassica napus HOM05D000113 ORTHO05D005835 1.8e-95 354.0 489 45.2
BraA09t37485Z Brassica rapa HOM05D000113 ORTHO05D005835 1.8e-95 354.0 489 45.2
Thhalv10023215m.g Eutrema salsugineum HOM05D000113 ORTHO05D005835 2.4e-95 353.6 495 45.5
Cc02_g23020 Coffea canephora HOM05D000113 ORTHO05D005835 5.9e-94 349.0 489 45.0
THA.LOC104820242 Tarenaya hassleriana HOM05D000113 ORTHO05D005835 5.9e-94 349.0 496 44.6
VMungo1215G2435 Vigna mungo HOM05D000113 ORTHO05D005835 2.5e-92 343.6 541 43.4
Nitab4.5_0002596g0100 Nicotiana tabacum HOM05D000113 ORTHO05D005835 3.2e-92 343.2 476 44.5
Lalb_Chr13g0304501 Lupinus albus HOM05D000113 ORTHO05D005835 9.3e-92 341.7 513 45.4
Ah.02g128270 Amaranthus hybridus HOM05D000113 ORTHO05D005835 1.6e-91 340.9 487 44.4
Nn5g27790 Nelumbo nucifera HOM05D000113 ORTHO05D005835 3.0e-90 336.7 496 44.8
EL10Ac6g14137 Beta vulgaris HOM05D000113 ORTHO05D005835 3.7e-88 329.7 491 41.5
QL02p100213 Quercus lobata HOM05D000113 ORTHO05D005835 2.4e-87 327.0 302 58.3
AUR62040619 Chenopodium quinoa HOM05D000113 ORTHO05D005835 8.5e-85 318.5 517 40.6
MBI09_g02133_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D005835 8.5e-85 318.5 538 44.6
Lj2g0019885 Lotus japonicus HOM05D000113 ORTHO05D005835 1.2e-83 314.7 460 44.3
Peaxi162Scf00011g00940 Petunia axillaris HOM05D000113 ORTHO05D005835 1.0e-82 311.6 462 44.4
Haze_10062 Corylus avellana HOM05D000113 ORTHO05D005835 4.8e-80 302.8 493 41.6
Aqoxy6G00123 Aquilegia oxysepala HOM05D000113 ORTHO05D005835 2.4e-79 300.4 488 41.0
BcaB07g31161 Brassica carinata HOM05D000113 ORTHO05D005835 6.9e-79 298.9 488 41.8
Sp2g05550 Schrenkiella parvula HOM05D000113 ORTHO05D005835 1.1e-76 291.6 505 41.0
AT1G58050 Arabidopsis thaliana HOM05D000113 ORTHO05D005835 6.7e-74 282.3 541 40.1
SalBow8G4197 Salvia bowleyana HOM05D000113 ORTHO05D005835 5.7e-73 279.3 448 42.6
Carub.0002s0658 Capsella rubella HOM05D000113 ORTHO05D005835 3.7e-72 276.6 544 38.4
vmacro01724 Vaccinium macrocarpon HOM05D000113 ORTHO05D005835 3.5e-70 270.0 321 49.2
CDE04G1155 Ceratophyllum demersum HOM05D000113 ORTHO05D005835 1.9e-68 264.2 504 36.1
Thhalv10023216m.g Eutrema salsugineum HOM05D000113 ORTHO05D005835 4.4e-65 253.1 459 39.2
Hund12935 Selenicereus undatus HOM05D008000 ORTHO05D010275 9.7e-65 251.9 297 47.1
A03p66400 Brassica napus HOM05D000113 ORTHO05D005835 1.8e-63 247.7 490 39.2
BraA03t15696Z Brassica rapa HOM05D000113 ORTHO05D005835 1.3e-61 241.5 487 39.0
HPP92_005700 Vanilla planifolia HOM05D000113 ORTHO05D005835 3.8e-61 240.0 489 35.8
HPP92_005690 Vanilla planifolia HOM05D000113 ORTHO05D005835 2.5e-60 237.3 525 35.2
AL2G17920 Arabidopsis lyrata HOM05D000113 ORTHO05D005835 7.5e-57 225.7 564 34.8
ATR0626G246 Amborella trichopoda HOM05D000113 ORTHO05D005835 1.1e-55 221.9 294 43.9
Hma1.2p1_0427F.1_g150750 Hydrangea macrophylla HOM05D000113 ORTHO05D005835 5.0e-53 213.0 265 49.4
Cpa.g.sc30.39 Carica papaya HOM05D000113 ORTHO05D005835 1.9e-52 211.1 259 48.6
Atru.chr6.769 Acer truncatum HOM05D000113 ORTHO05D005835 4.7e-51 206.5 128 74.2
Duzib052G0463 Durio zibethinus HOM05D000113 ORTHO05D005835 2.0e-49 201.1 433 35.1
Atru.chr6.768 Acer truncatum HOM05D000113 ORTHO05D005835 1.3e-48 198.4 272 46.3
CSS0006757 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005835 5.9e-46 189.5 252 49.2
Zm00001eb082690 Zea mays HOM05D000113 ORTHO05D005835 1.6e-43 181.4 464 30.6
SEGI_10903 Sequoiadendron giganteum HOM05D000113 ORTHO05D005835 1.8e-39 167.9 547 30.9
SMO164G0084 Selaginella moellendorffii HOM05D000113 ORTHO05D005835 7.3e-36 156.0 505 26.5
unitig_26.g9027 Utricularia gibba HOM05D000113 ORTHO05D005835 3.6e-35 153.7 417 35.0
Pp3c26_14400 Physcomitrium patens HOM05D000113 ORTHO05D005835 5.8e-33 146.4 537 27.9
unitig_26.g9028 Utricularia gibba HOM05D003925 ORTHO05D005835 5.8e-33 146.4 110 60.0
Actinidia10124 Actinidia chinensis HOM05D002653 ORTHO05D005835 6.8e-26 122.9 173 49.7
Mapoly0048s0072 Marchantia polymorpha HOM05D000113 ORTHO05D005835 1.9e-23 114.8 667 23.8
AagrBONN_evm.TU.Sc2ySwM_344.5572 Anthoceros agrestis HOM05D000113 ORTHO05D005835 1.6e-22 111.7 541 24.8
CBR_g34283 Chara braunii HOM05D000113 ORTHO05D005835 4.6e-22 110.2 389 27.0
QL02p100191 Quercus lobata HOM05D000113 ORTHO05D005835 6.0e-22 109.8 173 41.0
BcaC04g22109 Brassica carinata HOM05D000113 ORTHO05D005835 1.8e-18 98.2 188 38.3
Hma1.2p1_0427F.1_g150740 Hydrangea macrophylla HOM05D000113 ORTHO05D005835 2.6e-17 94.4 173 39.3
AUR62041950 Chenopodium quinoa HOM05D000113 ORTHO05D005835 1.7e-13 81.6 90 56.7
Cpa.g.sc30.40 Carica papaya HOM05D000113 ORTHO05D005835 5.1e-13 80.1 75 61.3
ATR0626G234 Amborella trichopoda HOM05D000113 ORTHO05D005835 3.3e-12 77.4 189 32.8
Dinv07476 Davidia involucrata HOM05D003925 ORTHO05D005835 6.9e-10 69.7 40 72.5
Sopen03g019800 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-09 67.0 72 48.6
Rhsim09G0005400 Rhododendron simsii HOM05D000540 ORTHO05D000681 7.8e-06 56.2 130 33.1


User provided reference genes

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