Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F04485 Eucalyptus grandis HOM05D007547 ORTHO05D009590 1.3e-42 176.0 90 100.0
Psat1g131000 Pisum sativum HOM05D007547 ORTHO05D009590 3.5e-24 114.8 90 68.9
Ca_03316_v3 Cicer arietinum L. HOM05D007547 ORTHO05D009590 4.6e-24 114.4 90 68.9
Medtr2g062800 Medicago truncatula HOM05D007547 ORTHO05D009590 1.0e-23 113.2 89 68.5
Lalb_Chr25g0284091 Lupinus albus HOM05D007547 ORTHO05D009590 1.3e-23 112.8 90 70.0
Phvul.005G044200 Phaseolus vulgaris HOM05D007547 ORTHO05D009590 1.3e-23 112.8 90 67.8
Lj3g0009805 Lotus japonicus HOM05D007547 ORTHO05D009590 2.3e-23 112.1 90 68.9
Glyma.08G160800 Glycine max HOM05D007547 ORTHO05D009590 3.9e-23 111.3 90 68.9
AT2G21820 Arabidopsis thaliana HOM05D007547 ORTHO05D009590 5.1e-23 110.9 90 65.6
Aa31LG4G1780 Aethionema arabicum HOM05D007547 ORTHO05D009590 6.6e-23 110.5 90 66.7
Sp5g34290 Schrenkiella parvula HOM05D007547 ORTHO05D009590 8.6e-23 110.2 89 66.3
HPP92_021471 Vanilla planifolia HOM05D007547 ORTHO05D009590 8.6e-23 110.2 90 67.8
SalBow8G1259 Salvia bowleyana HOM05D007547 ORTHO05D009590 1.5e-22 109.4 90 64.4
A07p27220 Brassica napus HOM05D007547 ORTHO05D009590 1.9e-22 109.0 90 66.7
BraA07t30366Z Brassica rapa HOM05D007547 ORTHO05D009590 1.9e-22 109.0 90 66.7
Sed0025991 Sechium edule HOM05D007547 ORTHO05D009590 1.9e-22 109.0 90 66.7
CARHR072880 Cardamine hirsuta HOM05D007547 ORTHO05D009590 2.5e-22 108.6 90 64.4
AL4G11130 Arabidopsis lyrata HOM05D007547 ORTHO05D009590 3.3e-22 108.2 90 64.4
MELO3C026033.2 Cucumis melo HOM05D007547 ORTHO05D009590 3.3e-22 108.2 90 70.0
Cpa.g.sc118.6 Carica papaya HOM05D007547 ORTHO05D009590 4.3e-22 107.8 90 64.4
TPR.G3626 Trifolium pratense HOM05D007547 ORTHO05D009590 4.3e-22 107.8 90 64.4
Carub.0004s0086 Capsella rubella HOM05D007547 ORTHO05D009590 5.6e-22 107.5 90 63.3
ClCG04G006620 Citrullus lanatus HOM05D007547 ORTHO05D009590 5.6e-22 107.5 90 66.7
Thhalv10019600m.g Eutrema salsugineum HOM05D007547 ORTHO05D009590 7.3e-22 107.1 90 63.3
BcaC08g45367 Brassica carinata HOM05D007547 ORTHO05D009590 9.5e-22 106.7 90 65.6
THA.LOC104808152 Tarenaya hassleriana HOM05D007547 ORTHO05D009590 9.5e-22 106.7 90 65.6
Nn1g09847 Nelumbo nucifera HOM05D007547 ORTHO05D009590 1.2e-21 106.3 89 64.0
BraA07t31944Z Brassica rapa HOM05D007547 ORTHO05D009590 1.6e-21 105.9 90 62.2
BolC6t38159H Brassica oleracea HOM05D007547 ORTHO05D009590 2.1e-21 105.5 90 64.4
MD05G1241500 Malus domestica HOM05D007547 ORTHO05D009590 2.8e-21 105.1 90 62.2
BcaC08g47491 Brassica carinata HOM05D007547 ORTHO05D009590 3.6e-21 104.8 90 64.4
C06p53150 Brassica napus HOM05D007547 ORTHO05D009590 3.6e-21 104.8 90 64.4
BolC6t40331H Brassica oleracea HOM05D007547 ORTHO05D009590 3.6e-21 104.8 90 64.4
CANSAT56G0291 Cannabis sativa HOM05D007547 ORTHO05D009590 3.6e-21 104.8 88 60.2
DCAR_013700 Daucus carota HOM05D007547 ORTHO05D009590 4.7e-21 104.4 90 62.2
Potri.010G176200 Populus trichocarpa HOM05D007547 ORTHO05D009590 4.7e-21 104.4 89 64.0
RcHm_v2.0_Chr5g0022881 Rosa chinensis HOM05D007547 ORTHO05D009590 6.2e-21 104.0 89 62.9
TAR624G0069 Trochodendron aralioides HOM05D007547 ORTHO05D009590 6.2e-21 104.0 88 63.6
Migut.M01490 Erythranthe guttata HOM05D007547 ORTHO05D009590 8.1e-21 103.6 90 63.3
CSS0011642 Camellia sinensis var. sinensis HOM05D007547 ORTHO05D009590 1.8e-20 102.4 90 63.3
PSO541G4573 Papaver somniferum HOM05D007547 ORTHO05D009590 2.4e-20 102.1 90 63.3
Manes.11G079000 Manihot esculenta HOM05D007547 ORTHO05D009590 4.0e-20 101.3 89 60.7
CsaV3_4G026690 Cucumis sativus L. HOM05D007547 ORTHO05D009590 8.9e-20 100.1 85 64.7
FAN16G2958 Fragaria x ananassa HOM05D007547 ORTHO05D009590 1.2e-19 99.8 90 58.9
QL04p096330 Quercus lobata HOM05D007547 ORTHO05D009590 1.2e-19 99.8 88 60.2
QL04p096363 Quercus lobata HOM05D007547 ORTHO05D009590 1.5e-19 99.4 88 60.2
Thecc.10G021200 Theobroma cacao HOM05D007547 ORTHO05D009590 1.5e-19 99.4 90 62.2
TWI59G1298 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 1.5e-19 99.4 90 64.4
Aqoxy1G00763 Aquilegia oxysepala HOM05D007547 ORTHO05D009590 2.0e-19 99.0 90 58.9
unitig_26.g10053 Utricularia gibba HOM05D007547 ORTHO05D009590 2.6e-19 98.6 89 62.9
Gorai.009G322400 Gossypium raimondii HOM05D007547 ORTHO05D009590 7.6e-19 97.1 90 58.9
MBI07_g10939_MAGBIO Magnolia biondii HOM05D005219 ORTHO05D006451 7.6e-19 97.1 88 59.1
FAN11G3189 Fragaria x ananassa HOM05D007547 ORTHO05D009590 1.3e-18 96.3 88 58.0
PGSC0003DMG400018766 Solanum tuberosum HOM05D007547 ORTHO05D009590 1.3e-18 96.3 89 59.6
COL.COLO4_25679 Corchorus olitorius HOM05D007547 ORTHO05D009590 1.7e-18 95.9 90 61.1
Gohir.D05G303200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.7e-18 95.9 90 58.9
Peaxi162Scf00479g00092 Petunia axillaris HOM05D007547 ORTHO05D009590 2.2e-18 95.5 90 60.0
Gohir.A02G145400 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.9e-18 95.1 90 56.7
Nitab4.5_0003384g0040 Nicotiana tabacum HOM05D007547 ORTHO05D009590 2.9e-18 95.1 89 59.6
QL04p096133 Quercus lobata HOM05D007547 ORTHO05D009590 2.9e-18 95.1 88 58.0
Sopen03g010530 Solanum pennellii HOM05D007547 ORTHO05D009590 4.9e-18 94.4 89 58.4
Gohir.A06G138100 Gossypium hirsutum HOM05D007547 ORTHO05D009590 6.4e-18 94.0 90 55.6
Gohir.A07G180700 Gossypium hirsutum HOM05D007547 ORTHO05D009590 6.4e-18 94.0 90 55.6
Gohir.D03G067200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 6.4e-18 94.0 90 55.6
Gorai.008G081200 Gossypium raimondii HOM05D007547 ORTHO05D009590 8.4e-18 93.6 90 56.7
CDE06G1569 Ceratophyllum demersum HOM05D000146 ORTHO05D000178 1.1e-17 93.2 88 59.1
Lalb_Chr25g0284071 Lupinus albus HOM05D007547 ORTHO05D009590 1.1e-17 93.2 88 62.5
Solyc03g046380.1 Solanum lycopersicum HOM05D007547 ORTHO05D009590 1.4e-17 92.8 89 58.4
Haze_18453 Corylus avellana HOM05D007547 ORTHO05D009147 3.2e-17 91.7 85 61.2
Gohir.A05G237600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 3.2e-17 91.7 90 54.4
Gohir.D03G007300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 3.2e-17 91.7 90 54.4
Gohir.D11G227600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 3.2e-17 91.7 90 54.4
Ah.11g039500 Amaranthus hybridus HOM05D007547 ORTHO05D009590 4.2e-17 91.3 90 60.0
Gohir.A11G192300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 5.4e-17 90.9 90 54.4
PGR031G1160 Punica granatum HOM05D007547 ORTHO05D009590 1.2e-16 89.7 90 56.7
C06p29990 Brassica napus HOM05D007547 ORTHO05D009590 1.6e-16 89.4 77 62.3
Lsat_1_v5_gn_5_102841 Lactuca sativa HOM05D007547 ORTHO05D009590 4.6e-16 87.8 90 53.3
Ciclev10007105m.g Citrus clementina HOM05D007547 ORTHO05D009590 6.0e-16 87.4 90 56.7
ECA234G4113 Erigeron canadensis HOM05D007547 ORTHO05D009590 7.8e-16 87.0 90 52.2
Sc15g0005120 Simmondsia chinensis HOM05D007547 ORTHO05D009590 7.8e-16 87.0 92 58.7
GSVIVG01036687001 Vitis vinifera HOM05D007547 ORTHO05D009590 7.8e-16 87.0 63 68.3
EL10Ac1g02249 Beta vulgaris HOM05D007547 ORTHO05D009590 1.0e-15 86.7 92 57.6
Atru.chr1.6 Acer truncatum HOM05D007547 ORTHO05D009590 6.6e-15 84.0 90 51.1
Nitab4.5_0001982g0020 Nicotiana tabacum HOM05D007547 ORTHO05D009590 6.6e-15 84.0 91 52.7
Gohir.A05G304300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 8.7e-15 83.6 82 54.9
CDE02G1937 Ceratophyllum demersum HOM05D007547 ORTHO05D009590 1.5e-14 82.8 88 59.1
TWI38G1141 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 3.3e-14 81.6 90 53.3
TWI38G2170 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 3.3e-14 81.6 90 53.3
AUR62035430 Chenopodium quinoa HOM05D007547 ORTHO05D009590 4.3e-14 81.3 92 55.4
CAN.G497.31 Capsicum annuum HOM05D007547 ORTHO05D009590 5.6e-14 80.9 91 52.7
AUR62035713 Chenopodium quinoa HOM05D007547 ORTHO05D009590 5.6e-14 80.9 92 55.4
Nitab4.5_0009717g0010 Nicotiana tabacum HOM05D007547 ORTHO05D009590 7.3e-14 80.5 91 52.7
Peaxi162Scf00020g01922 Petunia axillaris HOM05D007547 ORTHO05D009590 2.4e-12 75.5 65 60.0
BcaB02g07207 Brassica carinata HOM05D007547 ORTHO05D009590 5.3e-12 74.3 90 51.1
Os01g0654400 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 5.3e-12 74.3 94 48.9
Rhsim04G0026600 Rhododendron simsii HOM05D007547 ORTHO05D009590 2.0e-11 72.4 89 51.7
Os08g0385000 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 4.4e-11 71.2 100 46.0
Zm00001eb055260 Zea mays HOM05D007547 ORTHO05D009590 9.3e-09 63.5 107 41.1
AL2G39720 Arabidopsis lyrata HOM05D000005 ORTHO05D000012 6.6e-07 57.4 46 58.7
Mapoly0106s0030 Marchantia polymorpha HOM05D007547 ORTHO05D009590 3.3e-06 55.1 91 39.6


User provided reference genes

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