Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 4.7e-85 317.8 154 100.0
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 1.3e-55 219.9 151 66.9
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 1.5e-54 216.5 152 67.1
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 1.5e-54 216.5 152 67.1
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 1.9e-54 216.1 151 68.9
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 7.3e-54 214.2 150 66.7
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 7.3e-54 214.2 151 67.5
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.2e-53 213.4 150 67.3
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 3.6e-53 211.8 151 67.5
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 4.7e-53 211.5 151 67.5
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 4.7e-53 211.5 151 67.5
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 4.7e-53 211.5 151 68.2
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 4.7e-53 211.5 151 67.5
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 8.0e-53 210.7 147 66.7
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 8.0e-53 210.7 151 68.2
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 8.0e-53 210.7 154 65.6
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 1.0e-52 210.3 151 67.5
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 1.8e-52 209.5 151 66.2
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 1.8e-52 209.5 151 64.9
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 1.8e-52 209.5 151 64.9
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 2.3e-52 209.1 151 66.9
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 3.1e-52 208.8 151 66.9
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 3.1e-52 208.8 149 67.1
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 4.0e-52 208.4 151 65.6
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 6.8e-52 207.6 151 64.9
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 6.8e-52 207.6 150 66.0
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 1.2e-51 206.8 151 64.9
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 2.0e-51 206.1 151 66.2
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 2.6e-51 205.7 151 64.9
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 2.6e-51 205.7 154 65.6
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 4.4e-51 204.9 154 63.6
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 4.4e-51 204.9 151 63.6
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 9.8e-51 203.8 147 65.3
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 9.8e-51 203.8 150 64.7
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 1.3e-50 203.4 151 65.6
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 1.3e-50 203.4 150 64.7
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 1.3e-50 203.4 147 65.3
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 1.3e-50 203.4 147 63.9
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 1.7e-50 203.0 150 66.7
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 1.7e-50 203.0 151 62.3
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 2.2e-50 202.6 147 66.0
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 2.9e-50 202.2 150 64.0
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 3.7e-50 201.8 152 65.1
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 8.3e-50 200.7 151 63.6
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 1.9e-49 199.5 150 63.3
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 1.9e-49 199.5 151 62.3
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 3.2e-49 198.7 151 62.3
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 3.2e-49 198.7 151 62.3
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 4.1e-49 198.4 154 62.3
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 4.1e-49 198.4 151 61.6
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 5.4e-49 198.0 151 61.6
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 7.0e-49 197.6 151 63.6
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 7.0e-49 197.6 151 62.3
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 9.2e-49 197.2 148 62.8
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 9.2e-49 197.2 151 61.6
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 9.2e-49 197.2 151 61.6
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 1.2e-48 196.8 150 64.7
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 2.7e-48 195.7 151 62.3
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 2.7e-48 195.7 151 62.9
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 6.0e-48 194.5 151 61.6
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 6.0e-48 194.5 151 62.3
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 7.8e-48 194.1 150 62.0
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 1.0e-47 193.7 150 62.7
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 1.3e-47 193.4 150 63.3
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 1.3e-47 193.4 151 62.3
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 3.0e-47 192.2 151 60.9
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 3.0e-47 192.2 191 53.4
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 3.0e-47 192.2 180 53.9
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 3.9e-47 191.8 151 61.6
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 5.0e-47 191.4 152 63.2
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 5.0e-47 191.4 146 65.1
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 5.0e-47 191.4 151 62.3
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 8.6e-47 190.7 152 58.6
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 1.9e-46 189.5 151 60.9
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 2.5e-46 189.1 150 60.7
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 2.5e-46 189.1 151 60.9
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 3.3e-46 188.7 150 61.3
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 4.3e-46 188.3 150 60.7
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 9.5e-46 187.2 150 60.0
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 1.6e-45 186.4 150 60.0
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 1.6e-45 186.4 150 60.0
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 2.3e-44 182.6 134 65.7
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 4.4e-43 178.3 150 57.3
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 1.3e-42 176.8 219 46.1
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 3.7e-42 175.3 166 51.8
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 6.4e-42 174.5 153 57.5
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 7.1e-41 171.0 149 54.4
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.3e-39 166.8 151 57.0
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 5.2e-36 154.8 114 61.4
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 6.8e-36 154.5 151 51.7
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 4.4e-35 151.8 108 65.7
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 5.8e-35 151.4 108 66.7
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 1.3e-34 150.2 107 65.4
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 2.9e-34 149.1 110 63.6
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 2.1e-32 142.9 110 63.6
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 6.0e-32 141.4 111 56.8
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 3.0e-31 139.0 154 53.2
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 3.4e-27 125.6 87 64.4
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 5.4e-25 118.2 86 59.3
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 7.8e-24 114.4 75 69.3
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 7.6e-19 97.8 145 37.2
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.4e-17 93.6 100 51.0
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 1.9e-14 83.2 81 56.8
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 2.9e-10 69.3 53 64.2
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 4.2e-09 65.5 55 58.2


User provided reference genes

Program Settings