Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 1.0e-148 530.0 260 100.0
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 1.4e-81 307.0 239 62.8
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 6.9e-81 304.7 241 62.2
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 6.9e-81 304.7 203 68.5
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 5.8e-80 301.6 232 63.8
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 1.3e-79 300.4 218 63.3
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 4.9e-79 298.5 204 70.6
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 8.4e-79 297.7 245 60.0
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 8.4e-79 297.7 229 62.4
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 1.4e-78 297.0 258 59.3
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 1.4e-78 297.0 235 61.7
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 1.9e-78 296.6 223 63.7
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 5.5e-78 295.0 264 57.2
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.2e-77 293.9 203 66.0
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 1.2e-77 293.9 248 58.5
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 1.6e-77 293.5 263 57.0
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 2.1e-77 293.1 204 66.7
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 3.5e-77 292.4 223 63.2
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 7.9e-77 291.2 246 57.7
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 1.3e-76 290.4 223 62.8
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 1.3e-76 290.4 218 64.7
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 6.7e-76 288.1 245 59.2
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 8.7e-76 287.7 233 63.1
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 1.1e-75 287.3 232 60.3
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 1.1e-75 287.3 241 57.7
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 1.5e-75 287.0 270 55.6
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 1.5e-75 287.0 223 64.1
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 1.9e-75 286.6 220 63.2
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 7.4e-75 284.6 223 61.9
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 9.7e-75 284.3 241 60.2
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 9.7e-75 284.3 220 63.6
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 1.3e-74 283.9 241 60.2
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.6e-74 283.5 204 64.7
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 1.6e-74 283.5 202 67.8
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 2.1e-74 283.1 224 61.6
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 2.1e-74 283.1 224 64.3
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 2.8e-74 282.7 204 64.7
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 3.7e-74 282.3 223 63.2
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 6.3e-74 281.6 213 62.4
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 1.1e-73 280.8 195 68.7
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 1.4e-73 280.4 219 62.1
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 1.4e-73 280.4 214 61.2
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 1.8e-73 280.0 215 62.3
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 1.8e-73 280.0 204 65.2
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 4.1e-73 278.9 248 56.9
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 4.1e-73 278.9 229 59.8
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 6.9e-73 278.1 215 62.3
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 9.0e-73 277.7 244 59.4
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 1.5e-72 276.9 233 59.2
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 2.6e-72 276.2 215 61.4
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 7.6e-72 274.6 215 61.4
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 1.7e-71 273.5 242 57.0
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 3.8e-71 272.3 253 54.9
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 6.5e-71 271.6 255 51.8
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 1.1e-70 270.8 213 61.0
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 2.5e-70 269.6 260 51.5
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 4.2e-70 268.9 218 60.1
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 4.2e-70 268.9 204 59.3
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 4.2e-70 268.9 224 59.8
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 1.2e-69 267.3 251 53.0
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 2.7e-69 266.2 203 60.6
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 1.3e-68 263.8 226 58.4
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 3.0e-68 262.7 205 59.0
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 3.9e-68 262.3 214 60.3
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 5.7e-67 258.5 214 57.0
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 7.4e-67 258.1 203 60.6
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 3.7e-66 255.8 211 62.1
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 4.8e-66 255.4 252 51.2
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 1.4e-65 253.8 182 67.0
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 5.0e-63 245.4 182 64.8
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 1.8e-60 236.9 202 57.4
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 2.3e-60 236.5 221 52.5
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 1.1e-59 234.2 210 55.7
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 2.6e-59 233.0 218 56.0
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 8.2e-58 228.0 208 52.9
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 6.9e-57 224.9 234 50.0
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 2.0e-56 223.4 205 54.6
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 3.4e-56 222.6 181 58.0
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 1.3e-55 220.7 220 53.6
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 5.0e-55 218.8 196 53.6
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 5.0e-55 218.8 204 56.4
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 2.1e-53 213.4 199 55.3
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.0e-52 211.1 229 47.2
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 1.1e-51 207.6 191 57.1
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 3.7e-50 202.6 231 47.6
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 1.2e-48 197.6 184 56.0
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 3.5e-48 196.1 141 68.1
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 7.7e-48 194.9 185 51.4
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 2.9e-47 193.0 273 41.8
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 2.3e-44 183.3 141 63.8
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 2.0e-35 153.7 110 66.4
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 7.0e-33 145.2 155 53.5
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 8.6e-31 138.3 199 39.2
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 1.2e-27 127.9 166 45.2
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 9.8e-27 124.8 105 56.2
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 2.2e-26 123.6 99 58.6
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 4.5e-24 115.9 146 40.4
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 2.5e-22 110.2 87 56.3
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 1.4e-20 104.4 208 36.5
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 5.2e-20 102.4 102 53.9
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 3.2e-17 93.2 88 52.3
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 5.0e-15 85.9 194 30.4
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 5.8e-11 72.4 84 42.9
MELO3C019639.2 Cucumis melo HOM05D007250 ORTHO05D009162 2.9e-10 70.1 41 70.7
VMungo1080G0363 Vigna mungo HOM05D007250 ORTHO05D009162 3.5e-08 63.2 41 61.0
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 1.7e-07 60.8 57 45.6


User provided reference genes

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