Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 3.2e-47 191.4 97 100.0
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 2.6e-33 145.2 86 82.6
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 3.8e-32 141.4 86 80.2
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 4.9e-32 141.0 97 74.2
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 8.4e-32 140.2 86 82.6
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.4e-31 138.7 85 83.5
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 2.4e-31 138.7 86 81.4
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 5.4e-31 137.5 86 81.4
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 5.4e-31 137.5 88 78.4
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 5.4e-31 137.5 86 79.1
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 5.4e-31 137.5 86 79.1
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 1.2e-30 136.3 86 76.7
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 1.2e-30 136.3 86 76.7
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 1.2e-30 136.3 91 75.8
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 2.7e-30 135.2 88 78.4
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 2.7e-30 135.2 88 78.4
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 3.5e-30 134.8 84 83.3
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 6.0e-30 134.0 89 80.9
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 6.0e-30 134.0 86 80.2
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.8e-29 132.5 86 81.4
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 1.8e-29 132.5 84 83.3
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.8e-29 132.5 87 79.3
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 3.0e-29 131.7 87 79.3
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 3.9e-29 131.3 86 75.6
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 6.7e-29 130.6 86 80.2
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 1.1e-28 129.8 86 77.9
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 1.5e-28 129.4 86 75.6
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 1.5e-28 129.4 88 77.3
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 1.9e-28 129.0 87 80.5
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 1.9e-28 129.0 86 75.6
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 1.9e-28 129.0 88 73.9
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 1.9e-28 129.0 86 79.1
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.5e-28 128.6 87 73.6
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 2.5e-28 128.6 87 73.6
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 4.3e-28 127.9 89 76.4
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 4.3e-28 127.9 87 74.7
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 7.4e-28 127.1 86 80.2
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 9.6e-28 126.7 84 83.3
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 9.6e-28 126.7 86 74.4
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 9.6e-28 126.7 84 81.0
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 1.3e-27 126.3 86 75.6
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 2.8e-27 125.2 88 76.1
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.8e-27 125.2 88 72.7
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 3.7e-27 124.8 87 79.3
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 3.7e-27 124.8 87 79.3
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 1.4e-26 122.9 86 80.2
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 5.3e-26 120.9 82 75.6
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 5.3e-26 120.9 80 77.5
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 1.5e-25 119.4 86 73.3
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 2.0e-25 119.0 88 70.5
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 3.4e-25 118.2 84 72.6
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 3.4e-25 118.2 86 73.3
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 4.5e-25 117.9 86 76.7
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 4.5e-25 117.9 86 76.7
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 4.5e-25 117.9 88 75.0
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 5.8e-25 117.5 97 69.1
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 9.9e-25 116.7 87 74.7
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 1.3e-24 116.3 91 70.3
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.3e-24 116.3 97 67.0
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 1.7e-24 115.9 84 75.0
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 2.2e-24 115.5 86 75.6
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 2.2e-24 115.5 86 70.9
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 4.9e-24 114.4 84 77.4
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 2.4e-23 112.1 86 70.9
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 7.1e-23 110.5 88 76.1
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 1.6e-22 109.4 89 73.0
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.7e-22 108.6 80 73.8
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 3.5e-22 108.2 87 69.0
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 7.9e-22 107.1 84 70.2
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 7.9e-22 107.1 86 70.9
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 7.9e-22 107.1 85 68.2
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 1.0e-21 106.7 88 70.5
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.1e-20 103.2 79 75.9
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.5e-20 102.8 86 66.3
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 3.3e-20 101.7 86 60.5
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 4.3e-20 101.3 87 70.1
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 5.6e-20 100.9 88 67.0
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 7.4e-20 100.5 86 65.1
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 7.4e-20 100.5 90 68.9
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.3e-19 99.8 87 60.9
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.6e-19 99.4 83 67.5
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 2.1e-19 99.0 85 64.7
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 2.1e-19 99.0 85 63.5
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 2.8e-19 98.6 89 64.0
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 3.7e-19 98.2 87 69.0
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 3.7e-19 98.2 91 64.8
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 1.1e-18 96.7 92 55.4
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 1.4e-18 96.3 85 63.5
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 1.4e-18 96.3 85 63.5
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 1.4e-18 96.3 89 67.4
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 5.3e-18 94.4 85 65.9
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 1.3e-16 89.7 91 62.6
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 1.7e-16 89.4 86 62.8
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 2.2e-16 89.0 90 62.2
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 2.9e-16 88.6 88 63.6
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 2.9e-16 88.6 88 63.6
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 2.9e-16 88.6 88 63.6
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 2.9e-16 88.6 88 63.6
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 8.4e-16 87.0 58 79.3
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 3.2e-15 85.1 86 51.2
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 5.5e-15 84.3 61 67.2
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 5.5e-15 84.3 53 86.8
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 1.6e-14 82.8 61 59.0
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 4.6e-14 81.3 87 59.8
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 6.0e-14 80.9 83 60.2
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 6.0e-14 80.9 83 57.8
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 7.9e-14 80.5 89 58.4
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 7.9e-14 80.5 85 55.3
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 1.3e-13 79.7 91 57.1
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 1.3e-13 79.7 58 60.3
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 2.3e-13 79.0 89 53.9
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.8e-11 72.0 86 46.5
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 3.1e-10 68.6 99 47.5
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 4.1e-10 68.2 85 49.4
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 5.3e-10 67.8 50 76.0
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 2.6e-09 65.5 64 70.3
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 2.5e-07 58.9 51 74.5
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 7.2e-07 57.4 53 62.3
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 3.6e-06 55.1 91 42.9
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 6.1e-06 54.3 101 41.6


User provided reference genes

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