Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 1.1e-211 739.6 356 100.0
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 8.9e-164 580.5 355 76.9
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 1.3e-162 576.6 354 76.8
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 2.2e-162 575.9 354 76.3
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 6.6e-159 564.3 362 73.5
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 6.8e-156 554.3 354 74.6
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 4.4e-155 551.6 357 72.8
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 5.8e-155 551.2 353 75.1
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 9.9e-155 550.4 353 72.2
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 2.2e-154 549.3 353 72.8
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 4.9e-154 548.1 354 74.6
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 8.4e-154 547.4 353 72.0
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 2.4e-153 545.8 353 72.0
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 9.3e-153 543.9 353 71.4
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 4.6e-152 541.6 354 71.2
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 6.0e-152 541.2 354 71.8
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 1.0e-151 540.4 353 70.5
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 3.9e-151 538.5 353 70.5
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 5.1e-151 538.1 355 72.1
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 5.1e-151 538.1 353 70.5
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 5.1e-151 538.1 353 70.8
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 7.3e-150 534.3 353 71.4
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 1.6e-149 533.1 333 74.8
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 1.6e-149 533.1 354 70.9
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 2.1e-149 532.7 451 59.9
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 1.1e-148 530.4 353 69.1
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 5.3e-148 528.1 353 70.5
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 6.9e-148 527.7 353 70.3
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 1.7e-146 523.1 354 69.2
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 4.9e-146 521.5 353 70.0
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 6.4e-146 521.2 354 66.9
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 1.1e-145 520.4 353 69.7
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 5.4e-145 518.1 354 66.9
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 1.6e-144 516.5 353 68.0
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 1.6e-144 516.5 353 67.4
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 6.0e-144 514.6 418 60.5
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 7.9e-144 514.2 353 67.4
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.0e-143 513.8 418 60.5
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 3.0e-143 512.3 354 69.5
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 3.9e-143 511.9 354 66.9
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 8.7e-143 510.8 386 63.7
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 2.8e-141 505.8 354 67.2
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 6.2e-141 504.6 354 67.2
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 8.1e-141 504.2 353 66.6
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 1.4e-140 503.4 352 63.9
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 6.9e-140 501.1 353 67.1
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 9.0e-140 500.7 355 68.2
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 9.0e-140 500.7 355 68.2
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 2.0e-139 499.6 355 67.9
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 2.6e-139 499.2 368 64.1
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 3.4e-139 498.8 355 65.9
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 1.4e-137 493.4 354 66.9
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 2.5e-134 482.6 358 64.5
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 1.1e-132 477.2 355 63.9
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 5.3e-132 474.9 353 65.7
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 9.0e-132 474.2 356 62.9
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 6.5e-130 468.0 501 51.7
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 1.1e-129 467.2 355 63.1
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 1.9e-129 466.5 321 67.0
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 3.7e-125 452.2 354 60.2
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 1.9e-118 429.9 458 51.3
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 1.6e-117 426.8 358 58.1
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 2.8e-117 426.0 356 61.0
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 4.8e-109 398.7 288 66.7
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 5.7e-94 348.6 292 59.6
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 2.6e-86 323.2 191 75.9
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 4.8e-85 318.9 231 65.4
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 1.4e-84 317.4 361 44.0
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.4e-84 317.4 360 45.0
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 7.7e-83 311.6 199 72.4
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 2.2e-77 293.5 343 47.5
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 7.7e-75 285.0 217 64.5
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 8.6e-66 255.0 162 71.0
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 3.7e-61 239.6 149 71.1
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 1.9e-60 237.3 229 50.2
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 9.2e-60 235.0 251 51.8
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 1.4e-55 221.1 141 71.6
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.2e-54 218.0 359 35.7
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 2.1e-51 207.2 162 63.0
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 3.5e-43 179.9 424 30.9
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 9.6e-41 171.8 105 76.2
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 3.1e-39 166.8 128 64.1
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 1.2e-38 164.9 394 31.7
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.9e-28 131.0 102 61.8
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 2.7e-27 127.1 103 60.2
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 3.5e-27 126.7 106 55.7
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 7.9e-27 125.6 71 73.2
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.0e-26 125.2 108 54.6
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 2.3e-26 124.0 70 72.9
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 2.3e-26 124.0 70 72.9
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.3e-26 124.0 113 55.8
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 5.1e-26 122.9 70 72.9
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 5.3e-23 112.8 70 80.0
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 6.9e-23 112.5 70 78.6
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.0e-22 110.9 70 78.6
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 2.6e-22 110.5 292 28.4
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 5.8e-22 109.4 70 78.6
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 2.1e-19 100.9 52 78.8
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.9e-18 96.7 89 60.7
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 9.6e-17 92.0 76 55.3
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 1.6e-16 91.3 162 37.0
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.2e-14 85.1 50 68.0
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.5e-14 84.7 85 47.1
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.6e-11 74.7 50 64.0
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 4.3e-09 66.6 58 55.2
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 6.3e-08 62.8 91 40.7
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 1.1e-07 62.0 182 30.8


User provided reference genes

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