Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 6.2e-129 464.2 237 100.0
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 3.8e-70 268.9 217 63.1
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 7.2e-69 264.6 240 56.7
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 6.8e-67 258.1 229 59.0
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 6.8e-67 258.1 247 56.7
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 6.8e-67 258.1 247 59.1
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 5.7e-66 255.0 225 58.7
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 1.3e-65 253.8 252 56.0
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 1.3e-65 253.8 244 54.9
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 1.7e-65 253.4 247 58.7
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 2.2e-65 253.1 240 56.7
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.8e-65 252.7 236 59.3
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 4.8e-65 251.9 219 58.9
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 4.8e-65 251.9 224 59.8
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.8e-64 250.0 236 58.9
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 2.4e-64 249.6 231 57.6
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.4e-64 249.6 235 58.3
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 4.1e-64 248.8 219 58.4
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 7.0e-64 248.1 236 58.5
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 7.0e-64 248.1 244 54.5
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 9.1e-64 247.7 236 58.5
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 1.2e-63 247.3 221 58.4
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 1.6e-63 246.9 243 58.4
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 3.5e-63 245.7 215 57.7
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 4.5e-63 245.4 240 55.4
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 1.3e-62 243.8 245 53.9
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 2.9e-62 242.7 222 61.3
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 3.8e-62 242.3 197 62.4
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 5.0e-62 241.9 199 63.3
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 5.0e-62 241.9 199 60.8
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 8.5e-62 241.1 243 57.2
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 8.5e-62 241.1 206 57.8
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 2.5e-61 239.6 252 54.0
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 3.2e-61 239.2 226 57.1
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 4.2e-61 238.8 237 54.4
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 7.2e-61 238.0 225 55.1
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 9.4e-61 237.7 247 52.2
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 9.4e-61 237.7 225 58.2
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 1.2e-60 237.3 252 53.6
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.2e-60 237.3 198 61.6
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 1.2e-60 237.3 213 55.4
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 2.7e-60 236.1 228 57.0
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 8.0e-60 234.6 237 54.4
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 1.0e-59 234.2 205 60.0
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 1.4e-59 233.8 244 54.1
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 1.8e-59 233.4 225 57.8
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 2.3e-59 233.0 218 60.1
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 2.3e-59 233.0 227 54.6
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 2.3e-59 233.0 227 54.6
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 3.0e-59 232.6 207 57.5
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 4.0e-59 232.3 237 53.6
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 8.8e-59 231.1 216 57.4
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 1.2e-58 230.7 218 56.0
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 5.7e-58 228.4 252 52.4
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 1.3e-57 227.3 219 55.7
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 1.3e-57 227.3 216 56.5
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 3.7e-57 225.7 242 53.3
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 4.8e-57 225.3 220 55.0
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 2.4e-56 223.0 218 55.0
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 3.1e-56 222.6 198 60.1
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 4.1e-56 222.2 216 52.3
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 4.1e-56 222.2 220 50.9
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 7.0e-56 221.5 242 49.6
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 7.0e-56 221.5 197 59.9
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 2.0e-55 219.9 220 51.4
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 5.9e-55 218.4 247 51.0
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 5.9e-55 218.4 203 55.2
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 1.0e-54 217.6 232 52.6
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 1.7e-54 216.9 216 54.6
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 2.9e-54 216.1 230 51.3
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 5.0e-54 215.3 222 52.7
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 5.0e-54 215.3 243 51.0
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 1.5e-53 213.8 242 50.8
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 2.5e-53 213.0 220 52.3
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 9.5e-53 211.1 216 50.9
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 1.6e-52 210.3 230 52.2
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 2.8e-52 209.5 239 51.0
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 6.1e-52 208.4 207 51.2
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 1.4e-51 207.2 240 50.0
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 2.3e-51 206.5 242 50.8
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 3.0e-51 206.1 226 50.4
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 6.8e-51 204.9 212 54.2
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 8.9e-51 204.5 241 49.8
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 1.5e-50 203.8 249 48.6
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 2.0e-50 203.4 230 53.0
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 2.0e-50 203.4 230 53.0
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 2.0e-50 203.4 230 53.0
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 3.4e-50 202.6 255 47.5
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 5.7e-50 201.8 220 47.7
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 9.8e-50 201.1 230 52.6
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 1.3e-49 200.7 213 54.0
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 1.3e-49 200.7 183 55.2
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 2.8e-49 199.5 212 52.8
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 4.9e-49 198.7 216 50.9
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 8.3e-49 198.0 192 54.7
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 8.3e-49 198.0 221 51.6
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 7.0e-48 194.9 222 50.0
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 7.0e-48 194.9 238 47.9
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 7.0e-48 194.9 246 46.3
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 9.2e-48 194.5 249 46.2
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 1.2e-47 194.1 200 52.0
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 1.0e-46 191.0 263 45.2
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 1.7e-46 190.3 232 47.8
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 1.2e-44 184.1 258 43.8
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 4.7e-44 182.2 244 45.5
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 4.7e-44 182.2 192 50.5
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 6.1e-44 181.8 183 51.4
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 1.0e-43 181.0 231 44.2
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 3.1e-43 179.5 176 55.7
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 4.0e-43 179.1 189 50.3
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 3.2e-40 169.5 190 48.9
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 4.1e-40 169.1 200 53.0
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 5.6e-37 158.7 244 42.6
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 9.5e-37 157.9 217 44.7
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 1.2e-36 157.5 232 43.1
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 8.0e-36 154.8 188 47.9
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 8.0e-36 154.8 188 47.9
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 1.1e-35 154.5 188 47.9
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 4.4e-34 149.1 145 54.5
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 7.5e-34 148.3 201 43.3
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 8.6e-30 134.8 201 39.3
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 5.6e-29 132.1 226 41.6
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 4.0e-27 125.9 146 50.0
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 1.9e-21 107.1 228 36.8
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 8.1e-20 101.7 162 46.9
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 9.3e-16 88.2 73 67.1
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 1.5e-13 80.9 102 47.1
Nn1g02131 Nelumbo nucifera HOM05D006151 ORTHO05D007487 3.1e-11 73.2 165 32.1
AagrBONN_evm.TU.Sc2ySwM_295.7 Anthoceros agrestis HOM05D024008 ORTHO05D007487 4.6e-07 59.3 153 30.7
AUR62044379 Chenopodium quinoa HOM05D006151 ORTHO05D007487 4.6e-07 59.3 209 26.3
Oeu016600.1 Olea europaea HOM05D006151 ORTHO05D007487 1.7e-06 57.4 38 65.8
AagrBONN_evm.TU.Sc2ySwM_228.3977 Anthoceros agrestis HOM05D024008 ORTHO05D000523 3.9e-06 56.2 117 32.5
HPP92_019356 Vanilla planifolia HOM05D006151 ORTHO05D007487 5.1e-06 55.8 110 39.1


User provided reference genes

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