Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F04219 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.2e-57 226.1 185 100.0
Eucgr.D00723 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.5e-34 150.2 185 68.1
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 4.1e-19 99.0 177 59.9
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 3.5e-18 95.9 179 49.2
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 4.5e-18 95.5 200 56.0
PGR044G2207 Punica granatum HOM05D002879 ORTHO05D002930 3.8e-17 92.4 187 56.1
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 5.2e-14 82.0 186 46.8
Eucgr.F02697 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.2e-14 82.0 186 53.8
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.5e-13 80.5 106 47.2
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 2.0e-13 80.1 90 58.9
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.2e-12 76.6 93 66.7
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 3.7e-12 75.9 120 55.8
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 6.3e-12 75.1 88 81.8
QL02p038867 Quercus lobata HOM05D002879 ORTHO05D002930 8.3e-12 74.7 110 76.4
Lj2g0004069 Lotus japonicus HOM05D002879 ORTHO05D002930 1.1e-11 74.3 90 83.3
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 1.8e-11 73.6 92 68.5
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 1.8e-11 73.6 92 68.5
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 1.8e-11 73.6 191 56.0
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 1.8e-11 73.6 171 43.9
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 3.1e-11 72.8 93 62.4
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 3.1e-11 72.8 93 58.1
RcHm_v2.0_Chr6g0274981 Rosa chinensis HOM05D002879 ORTHO05D002930 3.1e-11 72.8 189 61.4
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.4e-11 72.0 90 72.2
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 5.4e-11 72.0 191 50.3
COL.COLO4_29859 Corchorus olitorius HOM05D002879 ORTHO05D002930 9.1e-11 71.2 91 78.0
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 9.1e-11 71.2 106 73.6
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 9.1e-11 71.2 106 73.6
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 9.1e-11 71.2 92 66.3
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 1.2e-10 70.9 206 51.5
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.2e-10 70.9 180 37.8
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.2e-10 70.9 106 42.5
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 1.6e-10 70.5 90 64.4
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 2.0e-10 70.1 92 50.0
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 2.0e-10 70.1 107 60.7
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.7e-10 69.7 93 54.8
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 4.5e-10 68.9 90 60.0
CiPaw.15G015000 Carya illinoinensis HOM05D002879 ORTHO05D002930 4.5e-10 68.9 90 81.1
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 7.7e-10 68.2 101 60.4
Cpa.g.sc21.214 Carica papaya HOM05D002879 ORTHO05D002930 7.7e-10 68.2 104 69.2
FAN15G0525 Fragaria x ananassa HOM05D002879 ORTHO05D002930 7.7e-10 68.2 204 51.0
Glyma.16G166600 Glycine max HOM05D002879 ORTHO05D002930 1.0e-09 67.8 90 78.9
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 1.0e-09 67.8 93 57.0
QL02p029925 Quercus lobata HOM05D002879 ORTHO05D002930 1.0e-09 67.8 63 77.8
AUR62026683 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.3e-09 67.4 122 62.3
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.7e-09 67.0 98 58.2
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 1.7e-09 67.0 87 59.8
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 2.3e-09 66.6 93 53.8
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 2.9e-09 66.2 93 65.6
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 3.8e-09 65.9 181 49.2
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 3.8e-09 65.9 93 49.5
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.8e-09 65.9 93 64.5
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 3.8e-09 65.9 93 64.5
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.0e-09 65.5 65 69.2
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 5.0e-09 65.5 93 52.7
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 8.6e-09 64.7 106 58.5
PGR044G2425 Punica granatum HOM05D002879 ORTHO05D002930 8.6e-09 64.7 122 61.5
arahy.Tifrunner.gnm1.ann1.HFKS8W Arachis hypogaea HOM05D002879 ORTHO05D002930 1.1e-08 64.3 93 77.4
Ciclev10002749m.g Citrus clementina HOM05D002879 ORTHO05D002930 1.1e-08 64.3 93 72.0
Manes.18G093201 Manihot esculenta HOM05D002879 ORTHO05D002930 1.1e-08 64.3 93 78.5
CAN.G264.4 Capsicum annuum HOM05D002879 ORTHO05D002930 2.5e-08 63.2 125 55.2
Cfa018311 Carpinus fangiana HOM05D066527 ORTHO05D002930 2.5e-08 63.2 146 50.7
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.2e-08 62.8 95 62.1
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 7.2e-08 61.6 141 38.3
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 9.5e-08 61.2 107 57.0
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 9.5e-08 61.2 92 64.1
Dinv25878 Davidia involucrata HOM05D002879 ORTHO05D002930 9.5e-08 61.2 124 57.3
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 9.5e-08 61.2 84 60.7
TAR381G1351 Trochodendron aralioides HOM05D002879 ORTHO05D002930 9.5e-08 61.2 95 76.8
arahy.Tifrunner.gnm1.ann1.MR10IA Arachis hypogaea HOM05D002879 ORTHO05D002930 1.2e-07 60.8 93 76.3
Eucgr.L02884 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.2e-07 60.8 65 73.8
COL.COLO4_29858 Corchorus olitorius HOM05D002879 ORTHO05D002930 2.1e-07 60.1 93 76.3
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.8e-07 59.7 84 59.5
MD05G1028100 Malus domestica HOM05D002879 ORTHO05D002930 2.8e-07 59.7 55 78.2
Psat1g101880 Pisum sativum HOM05D002879 ORTHO05D002930 2.8e-07 59.7 49 79.6
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.8e-07 59.7 199 50.3
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.8e-07 59.7 180 40.6
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.8e-07 59.7 180 40.6
MELO3C025026.2 Cucumis melo HOM05D002879 ORTHO05D002930 3.6e-07 59.3 87 57.5
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.6e-07 59.3 84 59.5
Cc10_g14940 Coffea canephora HOM05D002879 ORTHO05D002930 4.7e-07 58.9 99 71.7
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 4.7e-07 58.9 93 60.2
CsaV3_6G002580 Cucumis sativus L. HOM05D002879 ORTHO05D002930 6.1e-07 58.5 87 81.6
Eucgr.E02066 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.1e-07 58.5 98 56.1
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 6.1e-07 58.5 87 55.2
Prupe.8G034200 Prunus persica HOM05D002879 ORTHO05D002930 6.1e-07 58.5 64 82.8
arahy.Tifrunner.gnm1.ann1.BF4CMP Arachis hypogaea HOM05D002879 ORTHO05D002930 8.0e-07 58.2 49 87.8
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 8.0e-07 58.2 51 56.9
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla HOM05D002879 ORTHO05D002930 1.0e-06 57.8 64 71.9
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.0e-06 57.8 80 66.2
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 1.4e-06 57.4 49 55.1
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 1.4e-06 57.4 87 60.9
Phvul.004G094600 Phaseolus vulgaris HOM05D002879 ORTHO05D002930 1.4e-06 57.4 90 77.8
CsaV3_6G002590 Cucumis sativus L. HOM05D035606 ORTHO05D002930 1.8e-06 57.0 89 77.5
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 1.8e-06 57.0 51 54.9
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 3.0e-06 56.2 93 41.9
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.0e-06 56.2 112 54.5
Oeu046050.1 Olea europaea HOM05D002879 ORTHO05D002930 4.0e-06 55.8 64 82.8
TWI34G0839 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 4.0e-06 55.8 50 86.0
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.0e-06 55.8 127 29.9
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.0e-06 55.8 96 55.2
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 4.0e-06 55.8 85 63.5
Cc10_g14960 Coffea canephora HOM05D002879 ORTHO05D002930 5.2e-06 55.5 64 79.7
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 5.2e-06 55.5 47 55.3
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 6.8e-06 55.1 60 48.3
Actinidia10641 Actinidia chinensis HOM05D002879 ORTHO05D002930 8.8e-06 54.7 109 67.0
MELO3C025025.2 Cucumis melo HOM05D035606 ORTHO05D002930 8.8e-06 54.7 89 77.5
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 8.8e-06 54.7 86 59.3
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 8.8e-06 54.7 70 42.9


User provided reference genes

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