Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F04188 Eucalyptus grandis HOM05D005921 ORTHO05D007374 6.3e-293 1010.0 492 100.0
Eucgr.L02800 Eucalyptus grandis HOM05D005921 ORTHO05D007374 7.2e-281 969.9 542 89.7
Atru.chr13.2001 Acer truncatum HOM05D005921 ORTHO05D007374 2.7e-203 712.2 494 70.4
GSVIVG01001409001 Vitis vinifera HOM05D005921 ORTHO05D007374 8.7e-202 707.2 495 70.1
Thecc.08G159700 Theobroma cacao HOM05D005921 ORTHO05D007374 2.5e-201 705.7 495 69.9
PGR044G0568 Punica granatum HOM05D005921 ORTHO05D007374 3.7e-200 701.8 500 69.2
Cfa018279 Carpinus fangiana HOM05D005921 ORTHO05D007374 1.1e-199 700.3 447 74.3
Potri.005G197000 Populus trichocarpa HOM05D005921 ORTHO05D007374 4.5e-198 694.9 487 71.0
Manes.02G183400 Manihot esculenta HOM05D005921 ORTHO05D007374 1.7e-197 693.0 486 70.4
CiPaw.15G012300 Carya illinoinensis HOM05D005921 ORTHO05D007374 4.2e-196 688.3 495 69.3
Prupe.8G040700 Prunus persica HOM05D005921 ORTHO05D007374 4.6e-195 684.9 493 69.4
MD05G1033700 Malus domestica HOM05D005921 ORTHO05D007374 1.4e-194 683.3 494 69.4
Medtr1g097955 Medicago truncatula HOM05D005921 ORTHO05D007374 1.1e-193 680.2 484 68.0
Lalb_Chr06g0161731 Lupinus albus HOM05D005921 ORTHO05D007374 2.5e-193 679.1 480 68.5
Hma1.2p1_0358F.1_g134840 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 3.3e-193 678.7 490 67.8
Ca_10662_v3 Cicer arietinum L. HOM05D005921 ORTHO05D007374 5.7e-193 677.9 493 68.2
Lj5g0014499 Lotus japonicus HOM05D005921 ORTHO05D007374 5.7e-193 677.9 487 66.7
Psat0s899g0040 Pisum sativum HOM05D005921 ORTHO05D007374 1.4e-191 673.3 473 69.3
Ciclev10003457m.g Citrus clementina HOM05D005921 ORTHO05D007374 2.4e-191 672.5 434 72.6
TPR.G17011 Trifolium pratense HOM05D005921 ORTHO05D007374 2.4e-191 672.5 488 67.2
Glyma.10G221400 Glycine max HOM05D005921 ORTHO05D007374 4.1e-191 671.8 489 66.5
Lalb_Chr02g0141581 Lupinus albus HOM05D005921 ORTHO05D007374 5.3e-191 671.4 436 72.5
Rhsim11G0087800 Rhododendron simsii HOM05D005921 ORTHO05D007374 6.9e-191 671.0 493 66.9
RcHm_v2.0_Chr6g0274201 Rosa chinensis HOM05D005921 ORTHO05D007374 6.9e-191 671.0 493 68.8
Gorai.009G286300 Gossypium raimondii HOM05D005921 ORTHO05D007374 9.1e-191 670.6 497 66.8
Sp5g26720 Schrenkiella parvula HOM05D005921 ORTHO05D007374 1.0e-189 667.2 492 65.9
Gohir.A05G270866 Gossypium hirsutum HOM05D005921 ORTHO05D007374 2.9e-189 665.6 454 69.6
TWI32G1095 Tripterygium wilfordii HOM05D005921 ORTHO05D007374 5.0e-189 664.8 503 67.0
Aa31LG4G8950 Aethionema arabicum HOM05D005921 ORTHO05D007374 1.4e-188 663.3 484 66.1
Duzib116G0900 Durio zibethinus HOM05D005921 ORTHO05D007374 4.2e-188 661.8 420 73.1
COL.COLO4_13778 Corchorus olitorius HOM05D005921 ORTHO05D007374 3.6e-187 658.7 534 59.9
Glyma.20G170200 Glycine max HOM05D005921 ORTHO05D007374 3.6e-187 658.7 485 65.8
AT1G71696 Arabidopsis thaliana HOM05D005921 ORTHO05D007374 7.9e-187 657.5 492 64.2
arahy.Tifrunner.gnm1.ann1.9JVG50 Arachis hypogaea HOM05D005921 ORTHO05D007374 2.3e-186 656.0 499 64.5
arahy.Tifrunner.gnm1.ann1.TV90AE Arachis hypogaea HOM05D005921 ORTHO05D007374 2.3e-186 656.0 452 68.6
CANSAT25G0895 Cannabis sativa HOM05D005921 ORTHO05D007374 1.1e-185 653.7 482 66.6
AL2G31250 Arabidopsis lyrata HOM05D005921 ORTHO05D007374 1.5e-185 653.3 492 64.2
Carub.0002s1845 Capsella rubella HOM05D005921 ORTHO05D007374 2.0e-185 652.9 492 63.4
VMungo0720G0456 Vigna mungo HOM05D005921 ORTHO05D007374 2.0e-185 652.9 498 65.5
FAN24G0054 Fragaria x ananassa HOM05D005921 ORTHO05D007374 5.7e-185 651.4 495 66.3
vmacro01494 Vaccinium macrocarpon HOM05D005921 ORTHO05D007374 1.7e-184 649.8 473 67.4
A02p17260 Brassica napus HOM05D005921 ORTHO05D007374 1.4e-183 646.7 494 65.0
Sopen04g027990 Solanum pennellii HOM05D005921 ORTHO05D007374 1.4e-183 646.7 490 64.1
CsaV3_6G004990 Cucumis sativus L. HOM05D005921 ORTHO05D007374 1.8e-183 646.4 493 63.9
Solyc04g072010.3 Solanum lycopersicum HOM05D005921 ORTHO05D007374 1.8e-183 646.4 490 63.9
TAR381G0629 Trochodendron aralioides HOM05D005921 ORTHO05D007374 9.1e-183 644.0 475 68.2
FvH4_2g13020 Fragaria vesca HOM05D005921 ORTHO05D007374 1.2e-182 643.7 495 66.3
BcaC03g15284 Brassica carinata HOM05D005921 ORTHO05D007374 1.5e-182 643.3 494 64.8
CAN.G1252.3 Capsicum annuum HOM05D005921 ORTHO05D007374 2.6e-182 642.5 500 63.6
Thhalv10018610m.g Eutrema salsugineum HOM05D005921 ORTHO05D007374 4.5e-182 641.7 428 69.6
BcaB05g24658 Brassica carinata HOM05D005921 ORTHO05D007374 2.2e-181 639.4 493 64.1
CSS0006668 Camellia sinensis var. sinensis HOM05D005921 ORTHO05D007374 2.9e-181 639.0 449 69.3
MBI01_g34168_MAGBIO Magnolia biondii HOM05D005921 ORTHO05D007374 3.8e-181 638.6 475 66.5
ClCG08G007340 Citrullus lanatus HOM05D005921 ORTHO05D007374 8.5e-181 637.5 487 63.7
C02p28900 Brassica napus HOM05D005921 ORTHO05D007374 4.2e-180 635.2 510 62.9
EL10Ac1g01606 Beta vulgaris HOM05D005921 ORTHO05D007374 5.5e-180 634.8 493 63.1
Migut.N02950 Erythranthe guttata HOM05D005921 ORTHO05D007374 3.9e-178 628.6 437 67.3
Sed0007537 Sechium edule HOM05D005921 ORTHO05D007374 3.9e-178 628.6 492 63.0
FAN27G2380 Fragaria x ananassa HOM05D005921 ORTHO05D007374 5.2e-178 628.2 513 63.2
Cc10_g15280 Coffea canephora HOM05D005921 ORTHO05D007374 6.7e-178 627.9 502 63.1
CDE04G2034 Ceratophyllum demersum HOM05D005921 ORTHO05D007374 1.5e-177 626.7 487 62.2
Sc02g0003820 Simmondsia chinensis HOM05D005921 ORTHO05D007374 1.3e-176 623.6 416 71.6
Peaxi162Scf00360g00056 Petunia axillaris HOM05D005921 ORTHO05D007374 3.1e-175 619.0 487 63.4
Aqoxy6G00427 Aquilegia oxysepala HOM05D005921 ORTHO05D007374 4.1e-175 618.6 481 62.2
PSO675G2388 Papaver somniferum HOM05D005921 ORTHO05D007374 4.1e-175 618.6 469 63.3
HanXRQChr02g0042431 Helianthus annuus HOM05D005921 ORTHO05D007374 7.0e-175 617.8 472 65.0
MSTRG.24492 Avicennia marina HOM05D005921 ORTHO05D007374 1.7e-173 613.2 468 64.3
MSTRG.22109 Avicennia marina HOM05D005921 ORTHO05D007374 5.0e-173 611.7 477 61.6
Phvul.007G083600 Phaseolus vulgaris HOM05D005921 ORTHO05D007374 6.5e-173 611.3 406 70.9
Hund26678 Selenicereus undatus HOM05D005921 ORTHO05D007374 3.2e-172 609.0 526 59.1
CARHR291100 Cardamine hirsuta HOM05D005921 ORTHO05D007374 4.2e-172 608.6 399 71.7
Gohir.D05G273101 Gossypium hirsutum HOM05D005921 ORTHO05D007374 8.8e-170 600.9 497 61.8
Lsat_1_v5_gn_1_5181 Lactuca sativa HOM05D005921 ORTHO05D007374 7.5e-169 597.8 469 64.2
FAN15G3525 Fragaria x ananassa HOM05D005921 ORTHO05D007374 1.4e-167 593.6 516 60.1
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 3.1e-167 592.4 390 71.5
unitig_578.g16229 Utricularia gibba HOM05D005921 ORTHO05D007374 5.3e-167 591.7 423 64.5
Zm00001eb377250 Zea mays HOM05D005921 ORTHO05D007374 5.9e-166 588.2 468 61.5
Ah.05g168190 Amaranthus hybridus HOM05D005921 ORTHO05D007374 3.2e-164 582.4 406 67.5
Lj7A383T42 Lonicera japonica HOM05D005921 ORTHO05D007374 1.2e-163 580.5 449 64.6
MELO3C019977.2 Cucumis melo HOM05D005921 ORTHO05D007374 2.7e-163 579.3 392 69.4
SalBow6G1744 Salvia bowleyana HOM05D005921 ORTHO05D007374 1.5e-161 573.5 506 57.1
Nn5g28835 Nelumbo nucifera HOM05D005921 ORTHO05D007374 4.4e-161 572.0 488 60.5
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 2.2e-160 569.7 422 64.0
Lj4A704G63 Lonicera japonica HOM05D005921 ORTHO05D007374 1.6e-158 563.5 402 70.1
Sabra05G0149900 Salix brachista HOM05D005921 ORTHO05D007374 8.6e-157 557.8 498 60.2
AUR62034891 Chenopodium quinoa HOM05D005921 ORTHO05D007374 3.6e-155 552.4 386 66.6
FAN20G2564 Fragaria x ananassa HOM05D005921 ORTHO05D007374 2.8e-152 542.7 516 56.8
Hma1.2p1_0358F.1_g134830 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 2.0e-150 536.6 353 72.5
AUR62026635 Chenopodium quinoa HOM05D005921 ORTHO05D007374 2.3e-141 506.5 395 61.5
SGA_v2.0_scaffold54G19682 Striga asiatica HOM05D005921 ORTHO05D007374 6.6e-141 505.0 490 53.7
Nitab4.5_0013157g0020 Nicotiana tabacum HOM05D005921 ORTHO05D007374 9.5e-140 501.1 360 66.7
DCAR_001188 Daucus carota HOM05D005921 ORTHO05D007374 4.7e-139 498.8 300 75.7
Nitab4.5_0000099g0240 Nicotiana tabacum HOM05D005921 ORTHO05D007374 2.9e-136 489.6 552 49.6
Cpa.g.sc26.80 Carica papaya HOM05D005921 ORTHO05D007374 1.4e-135 487.3 328 69.8
Mapoly0096s0032 Marchantia polymorpha HOM05D005921 ORTHO05D007374 6.6e-133 478.4 384 58.6
SMO116G0063 Selaginella moellendorffii HOM05D005921 ORTHO05D007374 3.6e-131 472.6 357 61.3
Ciclev10003529m.g Citrus clementina HOM05D005921 ORTHO05D007374 1.7e-128 463.8 380 62.6
AagrBONN_evm.TU.Sc2ySwM_344.3190 Anthoceros agrestis HOM05D005921 ORTHO05D007374 3.9e-125 452.6 407 53.3
HPP92_000681 Vanilla planifolia HOM05D005921 ORTHO05D007374 3.1e-122 443.0 364 60.2
Pp3c16_14030 Physcomitrium patens HOM05D005921 ORTHO05D007374 9.9e-121 438.0 330 58.5
Haze_17806 Corylus avellana HOM05D005921 ORTHO05D007374 4.9e-112 409.1 268 73.5
QL02p037958 Quercus lobata HOM05D005921 ORTHO05D007374 4.9e-96 355.9 246 72.0
Pp3c6_12100 Physcomitrium patens HOM05D005921 ORTHO05D007374 8.4e-96 355.1 370 48.1
QL02p037460 Quercus lobata HOM05D005921 ORTHO05D007374 2.5e-95 353.6 246 71.5
BraA02t06774Z Brassica rapa HOM05D005921 ORTHO05D007374 7.4e-92 342.0 246 69.9
BolC2t08937H Brassica oleracea HOM05D005921 ORTHO05D007374 1.3e-91 341.3 246 69.9
CBR_g30849 Chara braunii HOM05D005921 ORTHO05D007374 1.3e-91 341.3 336 48.8
QL02p037446 Quercus lobata HOM05D005921 ORTHO05D007374 2.8e-91 340.1 246 64.6
QL02p037946 Quercus lobata HOM05D005921 ORTHO05D007374 2.8e-91 340.1 246 64.6
HPP92_000638 Vanilla planifolia HOM05D005921 ORTHO05D007374 1.2e-89 334.7 332 52.4
SHI09099 Sapria himalayana HOM05D005921 ORTHO05D007374 2.2e-88 330.5 294 58.5
Oeu017621.1 Olea europaea HOM05D005921 ORTHO05D007374 2.8e-83 313.5 179 77.1
MCO15G195 Micromonas commoda HOM05D005921 ORTHO05D007374 6.9e-74 282.3 379 39.8
BraA02t06773Z Brassica rapa HOM05D005921 ORTHO05D007374 3.3e-68 263.5 232 57.8
BolC2t08936H Brassica oleracea HOM05D005921 ORTHO05D007374 7.4e-68 262.3 239 56.5
PRCOL_00005633 Prasinoderma coloniale HOM05D005921 ORTHO05D007374 3.8e-64 250.0 312 42.3
Os06g0144600 Oryza sativa ssp. japonica HOM05D005921 ORTHO05D007374 6.1e-62 242.7 176 68.8
Zm00001eb035610 Zea mays HOM05D005921 ORTHO05D007374 8.2e-59 232.3 178 64.0
SEGI_33860 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 5.5e-55 219.5 237 51.5
Zm00001eb246880 Zea mays HOM05D005921 ORTHO05D007374 8.8e-45 185.7 108 78.7
Cre07.g335900 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 3.3e-39 167.2 344 32.8
SEGI_16149 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 2.6e-36 157.5 98 69.4
SHI09097 Sapria himalayana HOM05D005921 ORTHO05D007374 3.9e-32 143.7 74 82.4
Cre06.g309450 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 5.6e-31 139.8 343 30.6
Duzib093G1718 Durio zibethinus HOM05D005921 ORTHO05D007374 1.2e-30 138.7 73 82.2
MD10G1034600 Malus domestica HOM05D005921 ORTHO05D007374 1.0e-29 135.6 124 54.0
Zm00001eb035620 Zea mays HOM05D005921 ORTHO05D007374 1.2e-20 105.5 55 78.2
Pp3c27_7150 Physcomitrium patens HOM05D005921 ORTHO05D007374 1.4e-18 98.6 374 26.2
Sabra02G0051300 Salix brachista HOM05D005921 ORTHO05D007374 3.4e-12 77.4 115 46.1
Prupe.8G040900 Prunus persica HOM05D005921 ORTHO05D007374 1.6e-09 68.6 100 40.0
CBR_g24397 Chara braunii HOM05D005921 ORTHO05D132278 2.8e-06 57.8 83 30.1


User provided reference genes

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