Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F04121 Eucalyptus grandis HOM05D005065 ORTHO05D005944 3.1e-100 368.6 207 100.0
Duzib211G0507 Durio zibethinus HOM05D005065 ORTHO05D005944 2.1e-24 116.7 151 45.0
CiPaw.08G058800 Carya illinoinensis HOM05D005065 ORTHO05D005944 1.8e-23 113.6 151 48.3
Cfa013844 Carpinus fangiana HOM05D005065 ORTHO05D005944 2.3e-23 113.2 149 48.3
Rhsim06G0094100 Rhododendron simsii HOM05D005065 ORTHO05D005944 3.1e-23 112.8 134 45.5
CiPaw.07G160300 Carya illinoinensis HOM05D005065 ORTHO05D005944 5.2e-23 112.1 150 42.7
Glyma.20G174600 Glycine max HOM05D005065 ORTHO05D005944 8.9e-23 111.3 140 46.4
Manes.18G101500 Manihot esculenta HOM05D005065 ORTHO05D005944 1.2e-22 110.9 145 46.2
Dinv41716 Davidia involucrata HOM05D005065 ORTHO05D005944 1.5e-22 110.5 138 45.7
Lalb_Chr02g0141751 Lupinus albus HOM05D005065 ORTHO05D005944 2.6e-22 109.8 129 45.7
Potri.013G111700 Populus trichocarpa HOM05D005065 ORTHO05D005944 2.6e-22 109.8 159 45.3
Thecc.08G184600 Theobroma cacao HOM05D005065 ORTHO05D005944 2.6e-22 109.8 149 44.3
Eucgr.F02608 Eucalyptus grandis HOM05D005065 ORTHO05D005944 1.3e-21 107.5 178 43.3
Phvul.007G088700 Phaseolus vulgaris HOM05D005065 ORTHO05D005944 2.2e-21 106.7 143 42.7
Actinidia23336 Actinidia chinensis HOM05D005065 ORTHO05D005944 3.7e-21 105.9 144 45.8
Ciclev10002433m.g Citrus clementina HOM05D005065 ORTHO05D005944 4.9e-21 105.5 151 44.4
Duzib177G1167 Durio zibethinus HOM05D005065 ORTHO05D005944 8.3e-21 104.8 158 42.4
Lalb_Chr06g0162001 Lupinus albus HOM05D005065 ORTHO05D005944 8.3e-21 104.8 137 46.0
VMungo0720G1099 Vigna mungo HOM05D005065 ORTHO05D005944 1.9e-20 103.6 145 42.1
Dinv15081 Davidia involucrata HOM05D005065 ORTHO05D005944 3.2e-20 102.8 134 44.0
Actinidia02576 Actinidia chinensis HOM05D005065 ORTHO05D005944 4.1e-20 102.4 146 45.2
Glyma.10G217400 Glycine max HOM05D005065 ORTHO05D005944 7.1e-20 101.7 149 45.0
Haze_22517 Corylus avellana HOM05D005065 ORTHO05D005944 9.2e-20 101.3 150 41.3
Potri.019G082866 Populus trichocarpa HOM05D005065 ORTHO05D005944 9.2e-20 101.3 148 45.3
Lalb_Chr01g0010191 Lupinus albus HOM05D005065 ORTHO05D005944 1.2e-19 100.9 134 46.3
Gohir.A05G275300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.6e-19 100.5 150 44.0
TAR624G0039 Trochodendron aralioides HOM05D005065 ORTHO05D005944 2.7e-19 99.8 163 36.8
Gohir.D05G277400 Gossypium hirsutum HOM05D005065 ORTHO05D005944 4.6e-19 99.0 150 44.0
Ca_10622_v3 Cicer arietinum L. HOM05D005065 ORTHO05D005944 6.0e-19 98.6 152 42.8
Cc00_g13630 Coffea canephora HOM05D005065 ORTHO05D005944 6.0e-19 98.6 150 44.7
Gorai.009G290400 Gossypium raimondii HOM05D005065 ORTHO05D005944 6.0e-19 98.6 151 41.7
ClCG11G008090 Citrullus lanatus HOM05D005065 ORTHO05D005944 1.3e-18 97.4 159 40.9
DCAR_011533 Daucus carota HOM05D005065 ORTHO05D005944 1.3e-18 97.4 142 43.0
PGR042G0986 Punica granatum HOM05D005065 ORTHO05D005944 1.7e-18 97.1 157 43.9
Lalb_Chr03g0036131 Lupinus albus HOM05D005065 ORTHO05D005944 5.1e-18 95.5 137 47.4
MD05G1042300 Malus domestica HOM05D005065 ORTHO05D005944 5.1e-18 95.5 169 40.8
FAN15G3279 Fragaria x ananassa HOM05D005065 ORTHO05D005944 8.6e-18 94.7 178 40.4
MSTRG.25443 Avicennia marina HOM05D005065 ORTHO05D005944 1.9e-17 93.6 150 40.0
Oeu017883.1 Olea europaea HOM05D005065 ORTHO05D005944 1.9e-17 93.6 138 44.9
Peaxi162Scf00268g00105 Petunia axillaris HOM05D005065 ORTHO05D005944 1.9e-17 93.6 155 42.6
TWI60G1480 Tripterygium wilfordii HOM05D005065 ORTHO05D005944 1.9e-17 93.6 149 43.0
Lalb_Chr21g0305721 Lupinus albus HOM05D005065 ORTHO05D005944 2.5e-17 93.2 134 42.5
RcHm_v2.0_Chr6g0270871 Rosa chinensis HOM05D005065 ORTHO05D005944 2.5e-17 93.2 156 41.7
SalBow7G0321 Salvia bowleyana HOM05D005065 ORTHO05D005944 2.5e-17 93.2 142 42.3
Gohir.A13G121100 Gossypium hirsutum HOM05D005065 ORTHO05D005944 4.3e-17 92.4 204 36.3
Solyc06g065340.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 4.3e-17 92.4 153 40.5
Peaxi162Scf01013g00001 Petunia axillaris HOM05D005065 ORTHO05D005944 5.6e-17 92.0 147 43.5
CSS0016137 Camellia sinensis var. sinensis HOM05D005065 ORTHO05D005944 7.3e-17 91.7 147 40.1
Gohir.D13G125200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 9.5e-17 91.3 195 35.4
Gorai.013G140100 Gossypium raimondii HOM05D005065 ORTHO05D005944 9.5e-17 91.3 195 35.4
MELO3C008125.2 Cucumis melo HOM05D005065 ORTHO05D005944 1.2e-16 90.9 159 39.0
Hma1.2p1_0937F.1_g239030 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 1.2e-16 90.9 158 39.2
PGR102G0471 Punica granatum HOM05D005065 ORTHO05D005944 2.1e-16 90.1 164 37.8
A02p17610 Brassica napus HOM05D005065 ORTHO05D005944 2.8e-16 89.7 159 36.5
BraA02t06807Z Brassica rapa HOM05D005065 ORTHO05D005944 2.8e-16 89.7 159 36.5
QL02p033454 Quercus lobata HOM05D005065 ORTHO05D005944 2.8e-16 89.7 147 38.8
Atru.chr13.1737 Acer truncatum HOM05D005065 ORTHO05D005944 3.6e-16 89.4 159 39.0
MSTRG.22454 Avicennia marina HOM05D005065 ORTHO05D005944 3.6e-16 89.4 165 40.0
PGSC0003DMG400014033 Solanum tuberosum HOM05D005065 ORTHO05D005944 4.7e-16 89.0 154 42.9
Prupe.8G058900 Prunus persica HOM05D005065 ORTHO05D005944 6.2e-16 88.6 174 39.7
CAN.G199.8 Capsicum annuum HOM05D005065 ORTHO05D005944 8.1e-16 88.2 161 40.4
Lalb_Chr19g0129461 Lupinus albus HOM05D005065 ORTHO05D005944 8.1e-16 88.2 141 41.8
Nn5g27677 Nelumbo nucifera HOM05D005065 ORTHO05D005944 8.1e-16 88.2 150 39.3
PGSC0003DMG400026113 Solanum tuberosum HOM05D005065 ORTHO05D005944 8.1e-16 88.2 156 39.7
BcaB05g24697 Brassica carinata HOM05D005065 ORTHO05D005944 1.4e-15 87.4 165 37.6
Oeu029996.1 Olea europaea HOM05D005065 ORTHO05D005944 1.4e-15 87.4 202 37.1
Sed0021334 Sechium edule HOM05D005065 ORTHO05D005944 1.4e-15 87.4 199 39.7
Aqoxy5G02380 Aquilegia oxysepala HOM05D005065 ORTHO05D005944 2.4e-15 86.7 145 41.4
MSTRG.1526 Avicennia marina HOM05D005065 ORTHO05D005944 2.4e-15 86.7 158 37.3
Solyc11g018710.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 2.4e-15 86.7 168 39.3
Nn1g08370 Nelumbo nucifera HOM05D005065 ORTHO05D005944 3.1e-15 86.3 159 37.7
Sopen11g009740 Solanum pennellii HOM05D005065 ORTHO05D005944 3.1e-15 86.3 168 38.7
Cpa.g.sc66.33 Carica papaya HOM05D005065 ORTHO05D005944 4.0e-15 85.9 170 38.8
Manes.02G192500 Manihot esculenta HOM05D005065 ORTHO05D005944 5.2e-15 85.5 183 36.1
TPR.G8826 Trifolium pratense HOM05D005065 ORTHO05D005944 5.2e-15 85.5 199 37.2
BcaC03g15318 Brassica carinata HOM05D005065 ORTHO05D005944 6.8e-15 85.1 155 34.8
C02p29260 Brassica napus HOM05D005065 ORTHO05D005944 6.8e-15 85.1 155 34.8
BolC2t08977H Brassica oleracea HOM05D005065 ORTHO05D005944 6.8e-15 85.1 155 34.8
Hma1.2p1_0060F.1_g032900 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 1.5e-14 84.0 149 40.3
MBI09_g14012_MAGBIO Magnolia biondii HOM05D005065 ORTHO05D005944 1.5e-14 84.0 142 43.0
SGA_v2.0_scaffold149G36582 Striga asiatica HOM05D005065 ORTHO05D005944 2.0e-14 83.6 136 37.5
Lsat_1_v5_gn_6_109661 Lactuca sativa HOM05D005065 ORTHO05D005944 2.6e-14 83.2 141 41.1
Ah.05g178140 Amaranthus hybridus HOM05D005065 ORTHO05D005944 4.4e-14 82.4 190 33.7
HanXRQChr05g0150531 Helianthus annuus HOM05D005065 ORTHO05D005944 5.8e-14 82.0 130 41.5
Thhalv10019856m.g Eutrema salsugineum HOM05D005065 ORTHO05D005944 7.6e-14 81.6 162 35.8
BcaB03g15639 Brassica carinata HOM05D005065 ORTHO05D005944 1.3e-13 80.9 182 34.1
Carub.0002s1875 Capsella rubella HOM05D005065 ORTHO05D005944 1.3e-13 80.9 161 36.0
BraA07t31379Z Brassica rapa HOM05D005065 ORTHO05D005944 1.7e-13 80.5 159 35.8
Sp5g27040 Schrenkiella parvula HOM05D005065 ORTHO05D005944 1.7e-13 80.5 169 35.5
Migut.C01259 Erythranthe guttata HOM05D005065 ORTHO05D005944 2.2e-13 80.1 146 37.7
Sopen06g023830 Solanum pennellii HOM05D005065 ORTHO05D005944 2.2e-13 80.1 158 38.0
AL2G31580 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 3.8e-13 79.3 170 35.3
AT1G71970 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 4.9e-13 79.0 165 35.2
Lj5g0001381 Lotus japonicus HOM05D005065 ORTHO05D005944 4.9e-13 79.0 186 35.5
Oeu021210.1 Olea europaea HOM05D005065 ORTHO05D005944 4.9e-13 79.0 144 41.0
THA.LOC104809741 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 8.4e-13 78.2 163 35.6
Gorai.006G130800 Gossypium raimondii HOM05D005065 ORTHO05D005944 1.1e-12 77.8 158 36.1
HanXRQChr04g0107491 Helianthus annuus HOM05D005065 ORTHO05D005944 1.1e-12 77.8 140 38.6
Carub.0001s2220 Capsella rubella HOM05D005065 ORTHO05D005944 1.9e-12 77.0 136 36.8
CARHR064790 Cardamine hirsuta HOM05D005065 ORTHO05D005944 1.9e-12 77.0 159 36.5
BcaC08g46641 Brassica carinata HOM05D005065 ORTHO05D005944 2.4e-12 76.6 156 34.0
C06p46070 Brassica napus HOM05D005065 ORTHO05D005944 2.4e-12 76.6 156 34.0
BraA07t30683Z Brassica rapa HOM05D005065 ORTHO05D005944 2.4e-12 76.6 171 32.7
BolC6t38629H Brassica oleracea HOM05D005065 ORTHO05D005944 3.2e-12 76.3 160 35.6
Nitab4.5_0000277g0040 Nicotiana tabacum HOM05D005065 ORTHO05D005944 3.2e-12 76.3 138 39.9
Rhsim11G0058500 Rhododendron simsii HOM05D005065 ORTHO05D005944 3.2e-12 76.3 131 38.9
A07p30470 Brassica napus HOM05D005065 ORTHO05D005944 4.2e-12 75.9 216 31.5
Psat6g187880 Pisum sativum HOM05D005065 ORTHO05D005944 4.2e-12 75.9 148 38.5
BolC6t39660H Brassica oleracea HOM05D005065 ORTHO05D005944 7.1e-12 75.1 150 34.0
CARHR023050 Cardamine hirsuta HOM05D005065 ORTHO05D005944 9.2e-12 74.7 131 36.6
BcaB03g14918 Brassica carinata HOM05D005065 ORTHO05D005944 1.2e-11 74.3 155 33.5
C06p35230 Brassica napus HOM05D005065 ORTHO05D005944 1.2e-11 74.3 160 35.0
Lsat_1_v5_gn_1_10621 Lactuca sativa HOM05D005065 ORTHO05D005944 1.6e-11 73.9 131 36.6
Aa31LG4G8650 Aethionema arabicum HOM05D005065 ORTHO05D005944 2.1e-11 73.6 151 37.1
Sc23g0001280 Simmondsia chinensis HOM05D005065 ORTHO05D005944 2.1e-11 73.6 143 36.4
Oeu025521.1 Olea europaea HOM05D005065 ORTHO05D005944 2.7e-11 73.2 132 43.2
AT1G22680 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 3.5e-11 72.8 149 37.6
Nitab4.5_0009211g0010 Nicotiana tabacum HOM05D005065 ORTHO05D005944 3.5e-11 72.8 93 50.5
Sp1g20190 Schrenkiella parvula HOM05D005065 ORTHO05D005944 3.5e-11 72.8 134 38.1
Gohir.A09G116200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.0e-10 71.2 141 35.5
EL10Ac1g00090 Beta vulgaris HOM05D005065 ORTHO05D005944 1.3e-10 70.9 149 36.2
Gohir.D09G113300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.3e-10 70.9 158 34.2
Sabra19G0094300 Salix brachista HOM05D005065 ORTHO05D005944 1.3e-10 70.9 112 44.6
AL1G36220 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 3.9e-10 69.3 149 36.9
PSO782G1863 Papaver somniferum HOM05D005065 ORTHO05D005944 3.9e-10 69.3 138 31.2
Sabra13G0095100 Salix brachista HOM05D005065 ORTHO05D005944 6.6e-10 68.6 124 41.1
SGA_v2.0_scaffold24G10554 Striga asiatica HOM05D005065 ORTHO05D005944 1.5e-09 67.4 134 36.6
THA.LOC104800116 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 4.3e-09 65.9 167 34.1
HPP92_009270 Vanilla planifolia HOM05D005065 ORTHO05D005944 4.3e-09 65.9 150 35.3
FAN20G1873 Fragaria x ananassa HOM05D005065 ORTHO05D005944 4.7e-08 62.4 145 36.6
FAN24G2022 Fragaria x ananassa HOM05D005065 ORTHO05D005944 6.2e-08 62.0 145 37.2
CANSAT25G3119 Cannabis sativa HOM05D005065 ORTHO05D005944 1.1e-07 61.2 168 31.5
HPP92_005697 Vanilla planifolia HOM05D005065 ORTHO05D005944 1.2e-06 57.8 156 30.8
SGA_v2.0_scaffold118G32491 Striga asiatica HOM05D005065 ORTHO05D005944 2.0e-06 57.0 131 32.1
A07p38140 Brassica napus HOM05D005065 ORTHO05D005944 3.4e-06 56.2 96 38.5
FvH4_2g11630 Fragaria vesca HOM05D005065 ORTHO05D005944 3.4e-06 56.2 119 37.8


User provided reference genes

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