Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F04083 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.3e-83 311.6 152 100.0
Eucgr.F04057 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.5e-64 248.1 129 92.2
Eucgr.L00541 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.6e-51 205.7 120 85.0
Eucgr.E02488 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.5e-46 188.0 129 76.0
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 7.4e-43 177.6 149 64.4
Eucgr.K03525 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.3e-36 156.0 107 72.9
Eucgr.H01752 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.2e-30 135.6 95 72.6
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 1.7e-18 96.7 99 50.5
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 2.0e-16 89.7 112 44.6
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 7.8e-16 87.8 115 42.6
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 1.0e-15 87.4 99 47.5
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 1.3e-15 87.0 100 50.0
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 1.3e-15 87.0 104 46.2
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 1.7e-15 86.7 122 41.0
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 1.7e-15 86.7 127 40.9
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 2.3e-15 86.3 120 44.2
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 2.3e-15 86.3 109 45.9
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 2.3e-15 86.3 99 47.5
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 5.0e-15 85.1 94 47.9
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 5.0e-15 85.1 100 44.0
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 6.6e-15 84.7 106 45.3
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 6.6e-15 84.7 119 43.7
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 6.6e-15 84.7 102 43.1
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 6.6e-15 84.7 97 47.4
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 6.6e-15 84.7 98 45.9
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 8.6e-15 84.3 121 43.0
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 8.6e-15 84.3 104 45.2
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 1.1e-14 84.0 102 44.1
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 1.1e-14 84.0 99 46.5
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 1.1e-14 84.0 125 38.4
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 1.1e-14 84.0 112 45.5
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 1.1e-14 84.0 100 46.0
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 1.1e-14 84.0 91 49.5
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 1.9e-14 83.2 142 38.7
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.9e-14 83.2 107 44.9
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 1.9e-14 83.2 107 44.9
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 2.5e-14 82.8 106 41.5
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 2.5e-14 82.8 98 48.0
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 2.5e-14 82.8 99 45.5
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 3.3e-14 82.4 102 43.1
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 3.3e-14 82.4 104 44.2
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 3.3e-14 82.4 94 45.7
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 4.3e-14 82.0 102 44.1
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 4.3e-14 82.0 103 47.6
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 5.6e-14 81.6 106 44.3
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 5.6e-14 81.6 107 43.0
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 5.6e-14 81.6 121 42.1
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 5.6e-14 81.6 102 45.1
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 9.5e-14 80.9 116 43.1
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 1.2e-13 80.5 94 47.9
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 1.2e-13 80.5 91 47.3
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 1.6e-13 80.1 128 38.3
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 2.1e-13 79.7 101 44.6
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.1e-13 79.7 145 37.9
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.1e-13 79.7 145 42.1
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 2.1e-13 79.7 110 40.9
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 2.1e-13 79.7 123 39.8
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 2.8e-13 79.3 122 37.7
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 2.8e-13 79.3 111 41.4
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.8e-13 79.3 115 43.5
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 2.8e-13 79.3 114 42.1
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 2.8e-13 79.3 124 41.9
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 3.6e-13 79.0 94 47.9
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 3.6e-13 79.0 102 43.1
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 3.6e-13 79.0 129 38.8
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.7e-13 78.6 145 41.4
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 4.7e-13 78.6 101 44.6
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 4.7e-13 78.6 94 45.7
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 6.1e-13 78.2 107 43.0
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 6.1e-13 78.2 102 44.1
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 6.1e-13 78.2 127 40.2
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 6.1e-13 78.2 104 43.3
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 1.0e-12 77.4 95 46.3
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 1.8e-12 76.6 97 41.2
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 1.8e-12 76.6 125 42.4
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 3.0e-12 75.9 134 35.1
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 3.0e-12 75.9 131 38.9
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 4.0e-12 75.5 97 45.4
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 4.0e-12 75.5 106 40.6
HPP92_006897 Vanilla planifolia HOM05D003790 ORTHO05D004481 4.0e-12 75.5 92 43.5
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 5.2e-12 75.1 91 49.5
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 5.2e-12 75.1 136 39.0
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 5.2e-12 75.1 102 43.1
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 6.8e-12 74.7 122 40.2
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 8.9e-12 74.3 146 37.7
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 8.9e-12 74.3 134 37.3
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 1.2e-11 73.9 109 39.4
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.5e-11 73.6 100 46.0
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 2.0e-11 73.2 96 44.8
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 2.6e-11 72.8 120 36.7
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 3.4e-11 72.4 109 44.0
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 4.4e-11 72.0 101 38.6
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.4e-11 72.0 103 48.5
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 5.7e-11 71.6 119 38.7
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 7.5e-11 71.2 105 38.1
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 9.8e-11 70.9 145 34.5
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 9.8e-11 70.9 118 41.5
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 1.3e-10 70.5 101 40.6
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 1.7e-10 70.1 89 47.2
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 1.7e-10 70.1 137 35.8
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 2.2e-10 69.7 108 38.0
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 2.2e-10 69.7 101 40.6
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.2e-10 69.7 135 37.8
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 2.2e-10 69.7 135 37.8
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 2.9e-10 69.3 146 34.2
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 2.9e-10 69.3 100 41.0
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.9e-10 69.3 158 38.6
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 3.7e-10 68.9 106 39.6
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 3.7e-10 68.9 101 40.6
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 6.4e-10 68.2 106 39.6
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 8.3e-10 67.8 99 35.4
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.1e-09 67.4 102 42.2
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 1.1e-09 67.4 101 39.6
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.1e-09 67.4 101 39.6
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 1.1e-09 67.4 101 39.6
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 1.1e-09 67.4 128 40.6
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 1.1e-09 67.4 101 40.6
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.4e-09 67.0 135 36.3
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 3.2e-09 65.9 146 33.6
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 4.1e-09 65.5 105 41.0
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 4.1e-09 65.5 146 33.6
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 4.1e-09 65.5 146 33.6
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 4.1e-09 65.5 78 46.2
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 5.4e-09 65.1 93 43.0
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 1.2e-08 63.9 116 39.7
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 1.2e-08 63.9 142 33.8
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 1.2e-08 63.9 143 32.9
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 1.6e-08 63.5 123 38.2
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 1.6e-08 63.5 144 32.6
CARHR250350 Cardamine hirsuta HOM05D003790 ORTHO05D004481 1.6e-08 63.5 110 39.1
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 2.7e-08 62.8 97 41.2
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 2.7e-08 62.8 97 37.1
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 4.6e-08 62.0 147 35.4
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 5.9e-08 61.6 106 36.8
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 5.9e-08 61.6 97 36.1
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 5.9e-08 61.6 97 44.3
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 7.8e-08 61.2 146 36.3
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 7.8e-08 61.2 146 36.3
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 7.8e-08 61.2 112 40.2
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 1.0e-07 60.8 93 38.7
MD03G1297400 Malus domestica HOM05D003790 ORTHO05D004481 1.0e-07 60.8 91 36.3
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 1.7e-07 60.1 90 38.9
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 2.3e-07 59.7 93 36.6
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 2.3e-07 59.7 142 32.4
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 3.9e-07 58.9 93 36.6
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 3.9e-07 58.9 93 36.6
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 5.0e-07 58.5 97 34.0
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 6.6e-07 58.2 97 37.1
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 8.6e-07 57.8 143 34.3
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 8.6e-07 57.8 143 34.3
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 1.5e-06 57.0 94 37.2
SGA_v2.0_scaffold334G49053 Striga asiatica HOM05D003790 ORTHO05D004481 1.5e-06 57.0 108 34.3
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 1.9e-06 56.6 93 35.5
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 1.9e-06 56.6 93 35.5
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 1.9e-06 56.6 93 35.5


User provided reference genes

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