Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F04060 Eucalyptus grandis HOM05D007341 ORTHO05D009075 5.6e-92 340.9 168 100.0
PGR102G3137 Punica granatum HOM05D007341 ORTHO05D009075 1.7e-51 206.5 155 67.7
Thecc.06G049400 Theobroma cacao HOM05D007341 ORTHO05D009075 2.2e-48 196.1 125 76.8
Duzib235G0177 Durio zibethinus HOM05D007341 ORTHO05D009075 5.5e-47 191.4 160 65.0
CiPaw.01G092200 Carya illinoinensis HOM05D007341 ORTHO05D009075 7.2e-47 191.0 153 66.0
Haze_16246 Corylus avellana HOM05D007341 ORTHO05D009075 2.7e-46 189.1 134 70.1
Cfa002160 Carpinus fangiana HOM05D007341 ORTHO05D009075 7.9e-46 187.6 139 66.2
QL05p085130 Quercus lobata HOM05D007341 ORTHO05D009075 7.9e-46 187.6 122 73.0
Gohir.A05G116700 Gossypium hirsutum HOM05D007341 ORTHO05D009075 1.8e-45 186.4 125 73.6
Gorai.009G121500 Gossypium raimondii HOM05D007341 ORTHO05D009075 2.3e-45 186.0 125 73.6
Gohir.D05G117600 Gossypium hirsutum HOM05D007341 ORTHO05D009075 3.9e-45 185.3 125 72.8
TWI12G0959 Tripterygium wilfordii HOM05D007341 ORTHO05D009075 1.1e-44 183.7 118 75.4
Prupe.3G028000 Prunus persica HOM05D007341 ORTHO05D009075 2.0e-44 183.0 125 72.0
MELO3C019561.2 Cucumis melo HOM05D007341 ORTHO05D009075 5.7e-44 181.4 103 83.5
MD09G1169800 Malus domestica HOM05D007341 ORTHO05D009075 5.7e-44 181.4 120 71.7
CANSAT01G1666 Cannabis sativa HOM05D007341 ORTHO05D009075 7.4e-44 181.0 99 79.8
THA.LOC104808109 Tarenaya hassleriana HOM05D007341 ORTHO05D009075 2.2e-43 179.5 129 71.3
FvH4_6g36350 Fragaria vesca HOM05D007341 ORTHO05D009075 2.8e-43 179.1 125 68.8
FAN02G2832 Fragaria x ananassa HOM05D007341 ORTHO05D009075 2.8e-43 179.1 125 68.8
TAR636G1203 Trochodendron aralioides HOM05D007341 ORTHO05D009075 2.8e-43 179.1 120 75.0
GSVIVG01029444001 Vitis vinifera HOM05D007341 ORTHO05D009075 2.8e-43 179.1 95 87.4
Ciclev10029418m.g Citrus clementina HOM05D007341 ORTHO05D009075 3.7e-43 178.7 97 82.5
Sabra07G0002700 Salix brachista HOM05D007341 ORTHO05D009075 8.2e-43 177.6 111 78.4
RcHm_v2.0_Chr2g0148351 Rosa chinensis HOM05D007341 ORTHO05D009075 1.1e-42 177.2 107 74.8
CsaV3_3G018050 Cucumis sativus L. HOM05D007341 ORTHO05D009075 1.4e-42 176.8 94 87.2
Sed0003722 Sechium edule HOM05D007341 ORTHO05D009075 1.4e-42 176.8 94 86.2
CSS0015626 Camellia sinensis var. sinensis HOM05D007341 ORTHO05D009075 2.4e-42 176.0 151 60.3
Dinv20313 Davidia involucrata HOM05D007341 ORTHO05D009075 5.3e-42 174.9 141 63.1
Potri.007G003600 Populus trichocarpa HOM05D007341 ORTHO05D009075 7.0e-42 174.5 100 84.0
Cc06_g16890 Coffea canephora HOM05D007341 ORTHO05D009075 9.1e-42 174.1 124 71.8
FAN09G2851 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.2e-41 173.7 125 67.2
Lsat_1_v5_gn_9_114620 Lactuca sativa HOM05D007341 ORTHO05D009075 2.0e-41 172.9 112 73.2
Medtr6g004140 Medicago truncatula HOM05D007341 ORTHO05D009075 5.9e-41 171.4 119 68.9
Glyma.15G000400 Glycine max HOM05D007341 ORTHO05D009075 7.7e-41 171.0 136 64.0
Hma1.2p1_0422F.1_g150100 Hydrangea macrophylla HOM05D007341 ORTHO05D009075 1.7e-40 169.9 138 63.8
BcaC08g45393 Brassica carinata HOM05D007341 ORTHO05D009075 3.8e-40 168.7 138 64.5
C06p30240 Brassica napus HOM05D007341 ORTHO05D009075 3.8e-40 168.7 138 64.5
BolC6t38187H Brassica oleracea HOM05D007341 ORTHO05D009075 3.8e-40 168.7 138 64.5
HanXRQChr03g0072101 Helianthus annuus HOM05D007341 ORTHO05D009075 3.8e-40 168.7 101 78.2
Phvul.005G082000 Phaseolus vulgaris HOM05D007341 ORTHO05D009075 3.8e-40 168.7 126 65.1
Sp5g34040 Schrenkiella parvula HOM05D007341 ORTHO05D009075 3.8e-40 168.7 140 62.9
CARHR072660 Cardamine hirsuta HOM05D007341 ORTHO05D009075 6.5e-40 167.9 138 64.5
Carub.0002s2586 Capsella rubella HOM05D007341 ORTHO05D009075 8.5e-40 167.5 140 63.6
AT1G78995 Arabidopsis thaliana HOM05D007341 ORTHO05D009075 1.1e-39 167.2 138 64.5
A07p27380 Brassica napus HOM05D007341 ORTHO05D009075 1.1e-39 167.2 138 64.5
BraA07t30379Z Brassica rapa HOM05D007341 ORTHO05D009075 1.1e-39 167.2 138 64.5
DCAR_027600 Daucus carota HOM05D007341 ORTHO05D009075 1.1e-39 167.2 164 54.3
ECA240G2002 Erigeron canadensis HOM05D007341 ORTHO05D009075 2.5e-39 166.0 153 60.1
BcaB02g07190 Brassica carinata HOM05D007341 ORTHO05D009075 7.2e-39 164.5 138 63.8
Nitab4.5_0000349g0220 Nicotiana tabacum HOM05D007341 ORTHO05D009075 1.2e-38 163.7 110 71.8
Thhalv10019269m.g Eutrema salsugineum HOM05D007341 ORTHO05D009075 1.6e-38 163.3 135 63.0
PGSC0003DMG400019203 Solanum tuberosum HOM05D007341 ORTHO05D009075 2.1e-38 162.9 140 62.9
MSTRG.26115 Avicennia marina HOM05D007341 ORTHO05D009075 2.3e-37 159.5 167 55.1
Migut.K00075 Erythranthe guttata HOM05D007341 ORTHO05D009075 2.3e-37 159.5 145 57.9
Sopen10g035850 Solanum pennellii HOM05D007341 ORTHO05D009075 2.3e-37 159.5 134 61.9
Solyc10g086470.2 Solanum lycopersicum HOM05D007341 ORTHO05D009075 6.7e-37 157.9 134 61.2
AL2G39450 Arabidopsis lyrata HOM05D007341 ORTHO05D009075 8.8e-37 157.5 101 74.3
AUR62025687 Chenopodium quinoa HOM05D007341 ORTHO05D009075 1.1e-36 157.1 112 71.4
AUR62001305 Chenopodium quinoa HOM05D007341 ORTHO05D009075 1.5e-36 156.8 127 66.9
unitig_748.g7237 Utricularia gibba HOM05D007341 ORTHO05D009075 1.5e-36 156.8 120 68.3
Actinidia38822 Actinidia chinensis HOM05D007341 ORTHO05D009075 3.3e-36 155.6 134 64.9
Lalb_Chr24g0392671 Lupinus albus HOM05D007341 ORTHO05D009075 4.4e-36 155.2 105 69.5
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 1.3e-35 153.7 119 68.1
EL10Ac7g18105 Beta vulgaris HOM05D007341 ORTHO05D009075 2.8e-35 152.5 125 64.0
Aqoxy7G02561 Aquilegia oxysepala HOM05D007341 ORTHO05D009075 2.4e-34 149.4 131 61.1
Nn8g41280 Nelumbo nucifera HOM05D007341 ORTHO05D009075 3.1e-34 149.1 105 74.3
Hund18551 Selenicereus undatus HOM05D007341 ORTHO05D009075 7.0e-34 147.9 146 57.5
Pp3c15_22740 Physcomitrium patens HOM05D007341 ORTHO05D009075 2.7e-33 146.0 99 69.7
CDE05G1356 Ceratophyllum demersum HOM05D007341 ORTHO05D009075 1.7e-32 143.3 119 63.9
ClCG05G010440 Citrullus lanatus HOM05D007341 ORTHO05D009075 1.7e-32 143.3 83 81.9
ATR0626G096 Amborella trichopoda HOM05D007341 ORTHO05D009075 2.9e-32 142.5 97 70.1
Mapoly0061s0126 Marchantia polymorpha HOM05D007341 ORTHO05D009075 2.9e-32 142.5 159 50.9
Cpa.g.sc4293.1 Carica papaya HOM05D007341 ORTHO05D009075 8.5e-32 141.0 75 84.0
HPP92_026441 Vanilla planifolia HOM05D007341 ORTHO05D009075 1.9e-31 139.8 139 56.8
VMungo1080G1509 Vigna mungo HOM05D007341 ORTHO05D009075 1.9e-31 139.8 112 61.6
SGA_v2.0_scaffold94G28462 Striga asiatica HOM05D007341 ORTHO05D009075 3.2e-31 139.0 166 49.4
SMO232G0085 Selaginella moellendorffii HOM05D007341 ORTHO05D009075 7.2e-31 137.9 125 59.2
Zm00001eb227230 Zea mays HOM05D007341 ORTHO05D009075 1.6e-30 136.7 110 61.8
FAN14G2925 Fragaria x ananassa HOM05D007341 ORTHO05D009075 2.1e-30 136.3 125 57.6
FAN14G4935 Fragaria x ananassa HOM05D007341 ORTHO05D009075 2.1e-30 136.3 125 57.6
PSO063G2737 Papaver somniferum HOM05D007341 ORTHO05D009075 6.1e-30 134.8 122 60.7
PSO170G4447 Papaver somniferum HOM05D007341 ORTHO05D009075 1.4e-29 133.7 120 59.2
DCAR_011722 Daucus carota HOM05D007341 ORTHO05D009075 1.8e-29 133.3 152 48.0
Sc16g0003760 Simmondsia chinensis HOM05D007341 ORTHO05D009075 4.4e-28 128.6 95 70.5
Nitab4.5_0001911g0010 Nicotiana tabacum HOM05D007341 ORTHO05D009075 1.2e-25 120.6 110 59.1
Sabra14G0002900 Salix brachista HOM05D007341 ORTHO05D009075 3.8e-24 115.5 90 65.6
Os06g0704200 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 2.5e-23 112.8 108 54.6
C02p36120 Brassica napus HOM05D007341 ORTHO05D009075 7.2e-23 111.3 66 77.3
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 4.7e-22 108.6 102 58.8
Cre01.g000800 Chlamydomonas reinhardtii HOM05D007341 ORTHO05D009075 4.0e-21 105.5 115 44.3
Rhsim08G0252300 Rhododendron simsii HOM05D000912 ORTHO05D009075 8.8e-21 104.4 87 65.5
Manes.06G177800 Manihot esculenta HOM05D007341 ORTHO05D009075 1.5e-20 103.6 93 61.3
Peaxi162Scf00330g00029 Petunia axillaris HOM05D007341 ORTHO05D009075 2.2e-19 99.8 113 52.2
Oeu004021.1 Olea europaea HOM05D007341 ORTHO05D009075 8.3e-19 97.8 112 53.6
Lj9A544T49 Lonicera japonica HOM05D007341 ORTHO05D009075 9.2e-18 94.4 67 73.1
Aa31LG4G1990 Aethionema arabicum HOM05D007341 ORTHO05D009075 2.7e-17 92.8 116 52.6
SalBow1G8719 Salvia bowleyana HOM05D007341 ORTHO05D009075 5.9e-17 91.7 109 53.2
Psat6g000680 Pisum sativum HOM05D007341 ORTHO05D009075 2.3e-16 89.7 85 57.6
SalBow1G7986 Salvia bowleyana HOM05D007341 ORTHO05D009075 6.6e-16 88.2 86 60.5
Os02g0138100 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 1.1e-15 87.4 83 54.2
AagrBONN_evm.TU.Sc2ySwM_368.1307 Anthoceros agrestis HOM05D007341 ORTHO05D009075 1.6e-14 83.6 76 60.5
MCO04G269 Micromonas commoda HOM05D007341 ORTHO05D009075 1.6e-14 83.6 163 32.5
Ah.08g218010 Amaranthus hybridus HOM05D007341 ORTHO05D009075 4.7e-14 82.0 115 46.1
MBI13_g34919_MAGBIO Magnolia biondii HOM05D007341 ORTHO05D009075 4.0e-13 79.0 78 59.0
PRCOL_00000561 Prasinoderma coloniale HOM05D007341 ORTHO05D009075 3.4e-12 75.9 153 35.9
Zm00001eb231900 Zea mays HOM05D007341 ORTHO05D009075 3.9e-08 62.4 77 44.2


User provided reference genes

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