Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F04057 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.2e-71 271.6 129 100.0
Eucgr.F04083 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.8e-64 248.1 129 92.2
Eucgr.L00541 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.0e-53 211.8 120 87.5
Eucgr.E02488 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.1e-47 193.4 129 78.3
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 4.8e-43 177.9 142 68.3
Eucgr.K03525 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.5e-39 166.4 107 77.6
Eucgr.H01752 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.0e-32 143.7 84 82.1
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 5.2e-21 104.8 99 53.5
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 6.4e-19 97.8 125 44.8
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 1.4e-18 96.7 98 51.0
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 9.2e-18 94.0 102 48.0
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 9.2e-18 94.0 101 46.5
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 1.2e-17 93.6 115 44.3
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 1.6e-17 93.2 104 51.9
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 1.6e-17 93.2 109 47.7
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 2.0e-17 92.8 106 47.2
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 3.5e-17 92.0 100 48.0
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 5.9e-17 91.3 100 45.0
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 5.9e-17 91.3 95 51.6
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 7.8e-17 90.9 115 42.6
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 7.8e-17 90.9 104 48.1
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 1.0e-16 90.5 94 48.9
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 1.3e-16 90.1 99 48.5
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 1.3e-16 90.1 106 44.3
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 1.3e-16 90.1 122 44.3
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 1.3e-16 90.1 127 41.7
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 1.3e-16 90.1 95 51.6
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.7e-16 89.7 112 45.5
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 1.7e-16 89.7 128 44.5
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 2.3e-16 89.4 110 47.3
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 2.3e-16 89.4 107 46.7
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 3.0e-16 89.0 115 46.1
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 3.0e-16 89.0 107 46.7
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.9e-16 88.6 102 50.0
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 3.9e-16 88.6 114 44.7
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 5.0e-16 88.2 115 46.1
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.6e-16 87.8 94 53.2
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 8.6e-16 87.4 106 45.3
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 8.6e-16 87.4 107 44.9
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 8.6e-16 87.4 102 45.1
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 8.6e-16 87.4 106 47.2
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 1.1e-15 87.0 97 45.4
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.1e-15 87.0 94 52.1
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 1.5e-15 86.7 108 44.4
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 1.5e-15 86.7 104 46.2
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 1.9e-15 86.3 91 50.5
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 1.9e-15 86.3 109 46.8
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 2.5e-15 85.9 94 50.0
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 2.5e-15 85.9 113 46.0
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 2.5e-15 85.9 102 47.1
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 3.3e-15 85.5 128 42.2
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 4.3e-15 85.1 98 49.0
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 5.6e-15 84.7 103 46.6
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 5.6e-15 84.7 112 45.5
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 5.6e-15 84.7 122 41.0
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 5.6e-15 84.7 128 42.2
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 7.3e-15 84.3 116 43.1
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 7.3e-15 84.3 103 46.6
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 7.3e-15 84.3 94 50.0
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 7.3e-15 84.3 102 44.1
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 7.3e-15 84.3 126 42.9
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 7.3e-15 84.3 91 49.5
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 7.3e-15 84.3 93 48.4
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 9.5e-15 84.0 102 43.1
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 9.5e-15 84.0 94 47.9
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 9.5e-15 84.0 99 46.5
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 9.5e-15 84.0 108 43.5
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 1.2e-14 83.6 111 42.3
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 1.2e-14 83.6 104 45.2
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 1.2e-14 83.6 136 41.2
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 1.2e-14 83.6 110 42.7
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 1.6e-14 83.2 101 45.5
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 2.1e-14 82.8 102 48.0
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 2.1e-14 82.8 110 41.8
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 2.8e-14 82.4 107 46.7
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 2.8e-14 82.4 128 39.1
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 3.6e-14 82.0 136 41.2
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 3.6e-14 82.0 90 50.0
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 3.6e-14 82.0 106 43.4
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 4.7e-14 81.6 105 46.7
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 6.2e-14 81.3 100 45.0
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 6.2e-14 81.3 105 41.0
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 1.1e-13 80.5 120 40.8
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 1.4e-13 80.1 95 48.4
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.4e-13 80.1 103 47.6
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.8e-13 79.7 118 43.2
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.8e-13 79.7 95 50.5
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 1.8e-13 79.7 79 53.2
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 2.3e-13 79.3 98 45.9
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 2.3e-13 79.3 110 43.6
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 2.3e-13 79.3 101 44.6
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.1e-13 79.0 106 50.0
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.1e-13 79.0 106 50.0
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 5.2e-13 78.2 102 43.1
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 5.2e-13 78.2 109 45.0
HPP92_006897 Vanilla planifolia HOM05D003790 ORTHO05D004481 5.2e-13 78.2 92 44.6
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 6.8e-13 77.8 109 45.0
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 8.9e-13 77.4 102 43.1
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 8.9e-13 77.4 103 42.7
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.2e-12 77.0 115 44.3
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 1.2e-12 77.0 109 42.2
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 1.5e-12 76.6 101 41.6
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 2.6e-12 75.9 96 46.9
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 2.6e-12 75.9 129 39.5
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 2.6e-12 75.9 102 44.1
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 2.6e-12 75.9 102 44.1
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 2.6e-12 75.9 102 44.1
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 3.4e-12 75.5 107 42.1
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 4.4e-12 75.1 102 44.1
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 4.4e-12 75.1 122 41.0
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 5.8e-12 74.7 104 43.3
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 5.8e-12 74.7 101 41.6
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 5.8e-12 74.7 98 44.9
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 5.8e-12 74.7 120 43.3
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 5.8e-12 74.7 134 38.1
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 9.8e-12 73.9 100 40.0
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 2.2e-11 72.8 100 40.0
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 2.9e-11 72.4 103 37.9
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 2.9e-11 72.4 120 38.3
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 4.9e-11 71.6 103 40.8
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 6.4e-11 71.2 126 38.1
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 6.4e-11 71.2 101 41.6
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 6.4e-11 71.2 101 41.6
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 6.4e-11 71.2 101 41.6
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 6.4e-11 71.2 94 45.7
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 8.3e-11 70.9 102 41.2
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 8.3e-11 70.9 102 41.2
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 8.3e-11 70.9 105 38.1
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 8.3e-11 70.9 126 38.1
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 1.1e-10 70.5 116 41.4
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 1.1e-10 70.5 100 43.0
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 1.1e-10 70.5 99 45.5
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 1.4e-10 70.1 105 37.1
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.9e-10 69.7 102 43.1
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 7.0e-10 67.8 90 43.3
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 7.0e-10 67.8 98 41.8
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 7.0e-10 67.8 98 41.8
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 1.2e-09 67.0 88 39.8
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 2.0e-09 66.2 88 39.8
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 2.0e-09 66.2 88 39.8
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 2.0e-09 66.2 112 42.0
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 3.5e-09 65.5 125 38.4
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 3.5e-09 65.5 125 38.4
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 4.6e-09 65.1 104 39.4
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 4.6e-09 65.1 96 43.8
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 6.0e-09 64.7 97 35.1
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 6.0e-09 64.7 90 40.0
CARHR250350 Cardamine hirsuta HOM05D003790 ORTHO05D004481 7.8e-09 64.3 108 40.7
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 1.0e-08 63.9 88 38.6
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 1.0e-08 63.9 88 38.6
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 1.0e-08 63.9 88 38.6
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 1.3e-08 63.5 104 38.5
SGA_v2.0_scaffold334G49053 Striga asiatica HOM05D003790 ORTHO05D004481 3.0e-08 62.4 108 36.1
MD03G1297400 Malus domestica HOM05D003790 ORTHO05D004481 8.6e-08 60.8 91 36.3
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 1.1e-07 60.5 95 40.0
Eucgr.A02768 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.8e-06 55.8 73 45.2
Duzib147G1191 Durio zibethinus HOM05D003790 ORTHO05D004481 3.6e-06 55.5 112 38.4


User provided reference genes

Program Settings