Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03984 Eucalyptus grandis HOM05D008438 ORTHO05D008827 0.0e+00 1485.3 830 100.0
VMungo1080G1089 Vigna mungo HOM05D022716 ORTHO05D008827 6.1e-22 110.5 220 34.5
FvH4_6g28290 Fragaria vesca HOM05D015689 ORTHO05D008827 8.0e-22 110.2 118 47.5
FAN02G3655 Fragaria x ananassa HOM05D015689 ORTHO05D008827 8.0e-22 110.2 111 50.5
FAN14G1731 Fragaria x ananassa HOM05D015689 ORTHO05D008827 8.0e-22 110.2 118 47.5
Nitab4.5_0004738g0100 Nicotiana tabacum HOM05D008438 ORTHO05D008827 8.0e-22 110.2 87 52.9
Phvul.005G183500 Phaseolus vulgaris HOM05D022716 ORTHO05D008827 1.0e-21 109.8 246 34.6
RcHm_v2.0_Chr2g0132351 Rosa chinensis HOM05D015689 ORTHO05D008827 1.0e-21 109.8 83 55.4
ECA247G0974 Erigeron canadensis HOM05D008438 ORTHO05D008827 1.4e-21 109.4 173 35.8
Cc04_g05290 Coffea canephora HOM05D008438 ORTHO05D008827 2.3e-21 108.6 94 50.0
Peaxi162Scf00314g01044 Petunia axillaris HOM05D008438 ORTHO05D008827 5.2e-21 107.5 87 48.3
Rhsim12G0185500 Rhododendron simsii HOM05D017379 ORTHO05D008827 8.8e-21 106.7 171 39.8
FAN09G3978 Fragaria x ananassa HOM05D015689 ORTHO05D008827 2.0e-20 105.5 193 37.8
Actinidia08936 Actinidia chinensis HOM05D017379 ORTHO05D008827 2.6e-20 105.1 121 44.6
Hma1.2p1_1914F.1_g307390 Hydrangea macrophylla HOM05D008438 ORTHO05D008827 2.6e-20 105.1 78 56.4
MSTRG.22807 Avicennia marina HOM05D008438 ORTHO05D008827 5.7e-20 104.0 209 35.4
AUR62032995 Chenopodium quinoa HOM05D032589 ORTHO05D008827 5.7e-20 104.0 94 50.0
MD17G1226300 Malus domestica HOM05D015689 ORTHO05D008827 5.7e-20 104.0 70 60.0
GSVIVG01016106001 Vitis vinifera HOM05D008438 ORTHO05D008827 5.7e-20 104.0 83 51.8
Hund12562 Selenicereus undatus HOM05D008438 ORTHO05D008827 7.5e-20 103.6 65 66.2
unitig_52.g17481 Utricularia gibba HOM05D008438 ORTHO05D008827 1.7e-19 102.4 103 47.6
Glyma.15G002400 Glycine max HOM05D022716 ORTHO05D008827 2.2e-19 102.1 144 41.0
HanXRQChr04g0100031 Helianthus annuus HOM05D008438 ORTHO05D008827 3.7e-19 101.3 142 38.7
CAN.G1008.6 Capsicum annuum HOM05D008438 ORTHO05D008827 4.8e-19 100.9 143 37.8
Sed0012806 Sechium edule HOM05D008438 ORTHO05D008827 6.3e-19 100.5 80 50.0
Glyma.13G371300 Glycine max HOM05D022716 ORTHO05D008827 8.2e-19 100.1 196 35.7
Lj3g0015243 Lotus japonicus HOM05D022716 ORTHO05D008827 1.1e-18 99.8 268 29.5
Prupe.3G103500 Prunus persica HOM05D015689 ORTHO05D008827 1.1e-18 99.8 70 55.7
Haze_16688 Corylus avellana HOM05D008438 ORTHO05D008827 3.1e-18 98.2 112 43.8
Sc10g0008430 Simmondsia chinensis HOM05D008438 ORTHO05D008827 4.1e-18 97.8 201 37.3
TAR625G0030 Trochodendron aralioides HOM05D008438 ORTHO05D008827 4.1e-18 97.8 100 46.0
SGA_v2.0_scaffold5G02798 Striga asiatica HOM05D008438 ORTHO05D008827 5.3e-18 97.4 213 34.7
HanXRQChr02g0033611 Helianthus annuus HOM05D008438 ORTHO05D008827 1.2e-17 96.3 87 49.4
COL.COLO4_26771 Corchorus olitorius HOM05D032892 ORTHO05D008827 1.6e-17 95.9 195 34.9
PGSC0003DMG400014154 Solanum tuberosum HOM05D008438 ORTHO05D008827 2.7e-17 95.1 151 33.8
Rhsim08G0203200 Rhododendron simsii HOM05D004918 ORTHO05D005706 4.5e-17 94.4 100 44.0
Solyc03g117660.4 Solanum lycopersicum HOM05D008438 ORTHO05D008827 4.5e-17 94.4 125 38.4
Actinidia18261 Actinidia chinensis HOM05D017379 ORTHO05D008827 1.0e-16 93.2 124 36.3
Aqoxy7G03345 Aquilegia oxysepala HOM05D008438 ORTHO05D008827 1.7e-16 92.4 99 45.5
Migut.I00674 Erythranthe guttata HOM05D008438 ORTHO05D008827 1.7e-16 92.4 165 37.0
ClCG09G003500 Citrullus lanatus HOM05D008438 ORTHO05D008827 2.2e-16 92.0 78 48.7
Nitab4.5_0002700g0070 Nicotiana tabacum HOM05D008438 ORTHO05D008827 2.2e-16 92.0 87 47.1
Oeu004554.3 Olea europaea HOM05D008438 ORTHO05D008827 2.2e-16 92.0 101 43.6
Sopen03g036570 Solanum pennellii HOM05D008438 ORTHO05D008827 2.2e-16 92.0 123 39.0
Duzib235G0641 Durio zibethinus HOM05D032892 ORTHO05D008827 2.9e-16 91.7 196 33.7
MELO3C023487.2 Cucumis melo HOM05D008438 ORTHO05D008827 3.8e-16 91.3 121 36.4
SalBow7G4248 Salvia bowleyana HOM05D008438 ORTHO05D008827 1.5e-15 89.4 144 37.5
CsaV3_7G031700 Cucumis sativus L. HOM05D008438 ORTHO05D008827 1.9e-15 89.0 116 36.2
Sabra01G0028800 Salix brachista HOM05D008438 ORTHO05D008827 1.9e-15 89.0 123 35.8
TWI18G0426 Tripterygium wilfordii HOM05D008438 ORTHO05D008827 1.9e-15 89.0 208 32.2
Potri.001G042000 Populus trichocarpa HOM05D008438 ORTHO05D008827 3.2e-15 88.2 159 32.7
CANSAT56G0832 Cannabis sativa HOM05D008438 ORTHO05D008827 7.2e-15 87.0 86 41.9
Manes.04G100800 Manihot esculenta HOM05D008438 ORTHO05D008827 1.2e-14 86.3 253 30.4
SGA_v2.0_scaffold37G14678 Striga asiatica HOM05D008438 ORTHO05D008827 1.2e-14 86.3 84 46.4
EL10Ac8g19397 Beta vulgaris HOM05D032589 ORTHO05D008827 1.6e-14 85.9 81 48.1
PSO782G4356 Papaver somniferum HOM05D008438 ORTHO05D008827 2.7e-14 85.1 94 43.6
Manes.11G069100 Manihot esculenta HOM05D008438 ORTHO05D008827 3.6e-14 84.7 181 32.0
PSO063G1826 Papaver somniferum HOM05D008438 ORTHO05D008827 4.7e-14 84.3 94 43.6
Ciclev10026162m.g Citrus clementina HOM05D008438 ORTHO05D008827 6.1e-14 84.0 189 34.9
Lsat_1_v5_gn_4_132640 Lactuca sativa HOM05D008438 ORTHO05D008827 1.4e-13 82.8 49 65.3
Actinidia38661 Actinidia chinensis HOM05D008438 ORTHO05D008827 3.4e-12 78.2 98 37.8
Nitab4.5_0006744g0030 Nicotiana tabacum HOM05D022295 ORTHO05D008827 6.3e-11 73.9 83 42.2
Nn8g40077 Nelumbo nucifera HOM05D008438 ORTHO05D008827 8.3e-11 73.6 113 35.4
Sabra06G0137500 Salix brachista HOM05D037217 ORTHO05D008827 1.8e-10 72.4 73 45.2
Peaxi162Scf00563g00416 Petunia axillaris HOM05D022295 ORTHO05D008827 3.1e-10 71.6 99 35.4
QL02p094184 Quercus lobata HOM05D019529 ORTHO05D008827 5.4e-10 70.9 68 45.6
Rhsim03G0259300 Rhododendron simsii HOM05D008438 ORTHO05D008827 5.4e-10 70.9 138 29.7
Thecc.09G153900 Theobroma cacao HOM05D019525 ORTHO05D008827 7.0e-10 70.5 74 39.2
Nitab4.5_0001036g0130 Nicotiana tabacum HOM05D022295 ORTHO05D008827 9.1e-10 70.1 83 38.6
Cfa020785 Carpinus fangiana HOM05D019529 ORTHO05D008827 1.6e-09 69.3 68 41.2
Potri.006G180600 Populus trichocarpa HOM05D037217 ORTHO05D008827 2.0e-09 68.9 62 45.2
Duzib168G1121 Durio zibethinus HOM05D019525 ORTHO05D008827 4.5e-09 67.8 74 40.5
Dinv42819 Davidia involucrata HOM05D019090 ORTHO05D008827 5.9e-09 67.4 129 31.0
Dinv43281 Davidia involucrata HOM05D019090 ORTHO05D008827 5.9e-09 67.4 129 31.0
HanXRQChr05g0131701 Helianthus annuus HOM05D019090 ORTHO05D008827 1.0e-08 66.6 108 29.6
QL02p094192 Quercus lobata HOM05D019529 ORTHO05D008827 2.2e-08 65.5 93 34.4
Solyc07g005980.2 Solanum lycopersicum HOM05D022295 ORTHO05D008827 6.5e-08 63.9 88 36.4
Sopen07g002110 Solanum pennellii HOM05D022295 ORTHO05D008827 1.1e-07 63.2 88 36.4
TWI32G0905 Tripterygium wilfordii HOM05D008438 ORTHO05D008827 1.5e-07 62.8 74 37.8
Solyc07g007610.2 Solanum lycopersicum HOM05D001507 ORTHO05D009585 2.5e-07 62.0 98 36.7
Carub.0008s1835 Capsella rubella HOM05D011186 ORTHO05D013184 3.2e-07 61.6 85 38.8
COL.COLO4_05403 Corchorus olitorius HOM05D019525 ORTHO05D008827 7.2e-07 60.5 59 45.8
MBI13_g02429_MAGBIO Magnolia biondii HOM05D001860 ORTHO05D004239 7.2e-07 60.5 63 46.0
Sp6g19510 Schrenkiella parvula HOM05D011186 ORTHO05D013184 7.2e-07 60.5 91 36.3
TWI34G1835 Tripterygium wilfordii HOM05D008438 ORTHO05D008827 7.2e-07 60.5 74 39.2
HanXRQChr05g0141581 Helianthus annuus HOM05D019090 ORTHO05D008827 9.4e-07 60.1 101 29.7
Sabra18G0088400 Salix brachista HOM05D037217 ORTHO05D008827 9.4e-07 60.1 68 38.2
A10p15200 Brassica napus HOM05D011186 ORTHO05D013184 1.2e-06 59.7 94 33.0
Sopen07g003600 Solanum pennellii HOM05D001507 ORTHO05D009585 1.2e-06 59.7 97 36.1
Gohir.A13G076600 Gossypium hirsutum HOM05D001860 ORTHO05D004239 1.6e-06 59.3 62 46.8
AUR62028379 Chenopodium quinoa HOM05D030418 ORTHO05D008827 2.7e-06 58.5 91 35.2
PGSC0003DMG400030714 Solanum tuberosum HOM05D001507 ORTHO05D009585 2.7e-06 58.5 84 38.1
BcaB08g36149 Brassica carinata HOM05D011186 ORTHO05D013184 3.6e-06 58.2 105 31.4
BraA10t43603Z Brassica rapa HOM05D011186 ORTHO05D013184 3.6e-06 58.2 94 33.0
PGR042G3367 Punica granatum HOM05D001860 ORTHO05D004239 3.6e-06 58.2 69 34.8
HPP92_001713 Vanilla planifolia HOM05D001860 ORTHO05D004239 3.6e-06 58.2 61 44.3
PGSC0003DMG400011154 Solanum tuberosum HOM05D008438 ORTHO05D008827 6.1e-06 57.4 39 51.3
AT5G57820 Arabidopsis thaliana HOM05D011186 ORTHO05D013184 8.0e-06 57.0 89 38.2
Cc06_g07780 Coffea canephora HOM05D001507 ORTHO05D009585 8.0e-06 57.0 58 43.1
Thhalv10015752m.g Eutrema salsugineum HOM05D011186 ORTHO05D013184 8.0e-06 57.0 83 37.3
Manes.11G091600 Manihot esculenta HOM05D001507 ORTHO05D002108 8.0e-06 57.0 63 38.1


User provided reference genes

Program Settings