Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 3.3e-267 924.5 473 100.0
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 5.4e-209 731.1 471 77.1
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 1.3e-207 726.5 471 76.2
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 5.6e-206 721.1 471 76.9
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 6.2e-205 717.6 471 75.6
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 1.4e-204 716.5 471 76.4
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 1.4e-204 716.5 473 75.5
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 3.4e-203 711.8 472 75.6
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 3.4e-203 711.8 471 75.2
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 7.6e-203 710.7 451 77.2
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 2.9e-202 708.8 471 75.8
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 5.4e-201 704.5 481 75.3
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 2.1e-200 702.6 470 73.6
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 1.0e-199 700.3 472 74.6
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 3.9e-199 698.4 471 74.7
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 8.7e-199 697.2 413 79.7
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 8.7e-199 697.2 474 74.5
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 1.5e-198 696.4 413 81.4
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 2.5e-198 695.7 468 74.4
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 2.5e-198 695.7 474 74.5
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 1.3e-197 693.3 474 72.8
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 2.8e-197 692.2 467 74.1
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 4.8e-197 691.4 471 73.5
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 6.2e-197 691.0 471 72.8
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 1.4e-196 689.9 471 73.0
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 3.1e-196 688.7 470 71.9
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 5.3e-196 688.0 473 74.0
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 6.9e-196 687.6 471 72.8
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 1.5e-195 686.4 473 71.2
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 1.5e-195 686.4 471 71.8
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 2.0e-195 686.0 411 79.6
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 2.6e-195 685.6 471 72.8
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 2.6e-195 685.6 475 72.2
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 4.5e-195 684.9 474 73.8
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 4.5e-195 684.9 473 71.0
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 4.5e-195 684.9 472 72.7
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 5.8e-195 684.5 471 72.2
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 7.6e-195 684.1 411 79.6
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 1.3e-194 683.3 420 77.6
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 4.9e-194 681.4 474 70.5
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 2.4e-193 679.1 470 70.9
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 7.1e-193 677.6 413 78.5
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 7.1e-193 677.6 472 73.1
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 1.6e-192 676.4 472 71.0
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 3.5e-192 675.2 475 71.2
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 3.5e-192 675.2 475 72.2
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 3.5e-192 675.2 474 69.8
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 1.3e-191 673.3 472 69.9
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 3.0e-191 672.2 467 71.1
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 5.1e-191 671.4 474 71.1
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 1.9e-190 669.5 475 70.3
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 2.5e-190 669.1 407 79.1
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 5.6e-190 667.9 472 71.0
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 7.4e-190 667.5 474 70.7
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 7.4e-190 667.5 407 78.4
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 1.6e-189 666.4 473 71.5
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 1.6e-189 666.4 472 71.0
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 3.7e-189 665.2 474 71.1
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 6.2e-189 664.5 473 71.5
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 6.2e-189 664.5 473 71.5
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 1.4e-188 663.3 474 70.7
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 4.0e-188 661.8 459 72.3
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 5.3e-188 661.4 413 78.2
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 3.4e-187 658.7 459 72.1
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 5.8e-187 657.9 470 69.6
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 7.6e-187 657.5 473 69.3
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 7.6e-187 657.5 467 70.4
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 1.0e-186 657.1 474 69.0
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 1.3e-186 656.8 472 70.1
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 1.7e-186 656.4 471 68.8
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 2.2e-186 656.0 473 70.2
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 3.8e-186 655.2 396 79.8
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 7.1e-185 651.0 475 67.8
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 1.6e-184 649.8 489 68.7
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 6.0e-184 647.9 468 69.0
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 2.3e-183 646.0 473 68.9
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 3.9e-183 645.2 462 69.0
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 1.9e-182 642.9 495 66.7
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 1.9e-182 642.9 473 68.9
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 3.3e-182 642.1 516 65.1
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 7.4e-182 641.0 468 69.4
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.1e-180 637.1 407 75.7
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 4.5e-179 631.7 460 68.3
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 5.0e-178 628.2 468 68.2
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 2.0e-171 606.3 390 75.6
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 2.4e-164 582.8 451 63.9
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 1.5e-163 580.1 418 69.1
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 2.5e-161 572.8 408 65.9
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 9.4e-161 570.9 395 72.2
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 2.6e-158 562.8 404 66.3
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 9.1e-148 527.7 468 61.5
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 1.6e-147 526.9 324 80.2
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 7.7e-139 498.0 352 69.6
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 3.8e-130 469.2 463 56.6
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 4.3e-121 439.1 400 54.0
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 2.0e-118 430.3 429 52.0
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 1.6e-115 420.6 404 53.0
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 2.1e-115 420.2 398 53.5
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 1.1e-108 397.9 396 52.0
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 3.9e-98 362.8 402 47.0
Hma1.2p1_0109F.1_g052570 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 3.0e-74 283.5 205 68.8
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 6.5e-69 265.8 187 71.1
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 1.1e-65 255.0 202 60.9
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 1.1e-65 255.0 202 60.9
SEGI_25940 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 8.2e-56 222.2 144 69.4
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 4.7e-27 126.7 88 75.0
Lj5A80T54 Lonicera japonica HOM05D007307 ORTHO05D009190 8.0e-19 99.4 61 75.4


User provided reference genes

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