Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03911 Eucalyptus grandis HOM05D000005 ORTHO05D191750 1.5e-265 919.5 653 100.0
Eucgr.F03913 Eucalyptus grandis HOM05D000005 ORTHO05D000012 9.0e-45 186.0 509 33.8
Eucgr.F03896 Eucalyptus grandis HOM05D000005 ORTHO05D011898 1.2e-25 122.5 173 47.4
Eucgr.C02567 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.9e-11 74.7 194 31.4
Eucgr.C02570 Eucalyptus grandis HOM05D000005 ORTHO05D000012 5.5e-10 70.5 172 29.7
Eucgr.L00696 Eucalyptus grandis HOM05D000005 ORTHO05D000012 5.5e-10 70.5 174 29.3
CiPaw.15G158500 Carya illinoinensis HOM05D000005 ORTHO05D000012 7.2e-10 70.1 169 29.0
Eucgr.L00700 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.6e-09 68.9 172 29.7
Eucgr.C03964 Eucalyptus grandis HOM05D012617 ORTHO05D007072 2.1e-09 68.6 160 33.1
Eucgr.C03961 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.6e-09 67.8 160 31.2
QL06p019572 Quercus lobata HOM05D000005 ORTHO05D000012 4.7e-09 67.4 164 29.9
QL11p002066 Quercus lobata HOM05D000005 ORTHO05D000012 4.7e-09 67.4 52 61.5
CiPaw.15G158200 Carya illinoinensis HOM05D000005 ORTHO05D000012 6.1e-09 67.0 169 28.4
Prupe.8G111700 Prunus persica HOM05D000005 ORTHO05D000012 6.1e-09 67.0 119 40.3
QL11p001908 Quercus lobata HOM05D000005 ORTHO05D000012 1.0e-08 66.2 52 61.5
Lj2g0014678 Lotus japonicus HOM05D000005 ORTHO05D000012 1.8e-08 65.5 59 54.2
CiPaw.15G158600 Carya illinoinensis HOM05D000005 ORTHO05D000012 2.3e-08 65.1 166 27.7
Eucgr.F03887 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.3e-08 65.1 233 29.2
Cc08_g06850 Coffea canephora HOM05D000005 ORTHO05D000012 3.9e-08 64.3 168 28.6
FAN04G2826 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.9e-08 64.3 153 30.7
Eucgr.F02533 Eucalyptus grandis HOM05D000005 ORTHO05D000012 5.1e-08 63.9 184 29.9
FAN17G0833 Fragaria x ananassa HOM05D000005 ORTHO05D014638 5.1e-08 63.9 57 50.9
Lalb_Chr22g0354031 Lupinus albus HOM05D000005 ORTHO05D000012 5.1e-08 63.9 59 50.8
QL11p001861 Quercus lobata HOM05D000005 ORTHO05D000012 5.1e-08 63.9 52 59.6
CiPaw.15G120700 Carya illinoinensis HOM05D000005 ORTHO05D000012 6.7e-08 63.5 171 27.5
CiPaw.15G157400 Carya illinoinensis HOM05D000005 ORTHO05D000012 6.7e-08 63.5 169 26.0
Lj3g0027566 Lotus japonicus HOM05D000005 ORTHO05D000012 6.7e-08 63.5 158 30.4
Eucgr.C02558 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.8e-08 63.2 168 28.6
Prupe.2G045200 Prunus persica HOM05D000005 ORTHO05D000012 8.8e-08 63.2 58 53.4
PGR042G1273 Punica granatum HOM05D000005 ORTHO05D000012 8.8e-08 63.2 160 31.2
arahy.Tifrunner.gnm1.ann1.F56ZG1 Arachis hypogaea HOM05D000005 ORTHO05D000012 1.1e-07 62.8 59 50.8
arahy.Tifrunner.gnm1.ann1.RYL35A Arachis hypogaea HOM05D000005 ORTHO05D000012 1.1e-07 62.8 59 50.8
Eucgr.E01990 Eucalyptus grandis HOM05D000005 ORTHO05D011459 1.1e-07 62.8 129 31.0
Potri.019G002500 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.1e-07 62.8 163 28.8
QL03p017067 Quercus lobata HOM05D000005 ORTHO05D000012 1.1e-07 62.8 55 50.9
QL07p040351 Quercus lobata HOM05D000005 ORTHO05D000012 1.1e-07 62.8 55 56.4
QL09p003491 Quercus lobata HOM05D000005 ORTHO05D000012 1.1e-07 62.8 59 49.2
QL11p002021 Quercus lobata HOM05D000005 ORTHO05D000012 1.1e-07 62.8 52 59.6
Eucgr.C03975 Eucalyptus grandis HOM05D000005 ORTHO05D007073 1.5e-07 62.4 159 29.6
Potri.019G001602 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.5e-07 62.4 55 56.4
CiPaw.15G157700 Carya illinoinensis HOM05D000005 ORTHO05D000012 2.0e-07 62.0 169 28.4
Eucgr.F01287 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.6e-07 61.6 121 31.4
Potri.019G001600 Populus trichocarpa HOM05D000005 ORTHO05D000012 2.6e-07 61.6 55 56.4
Prupe.8G112100 Prunus persica HOM05D000005 ORTHO05D000012 2.6e-07 61.6 59 54.2
QL10p026374 Quercus lobata HOM05D000005 ORTHO05D000012 2.6e-07 61.6 162 29.0
QL11p001449 Quercus lobata HOM05D000005 ORTHO05D000012 2.6e-07 61.6 165 27.9
Eucgr.E02219 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.3e-07 61.2 166 28.9
Eucgr.I02727 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.3e-07 61.2 55 52.7
Lj3g0016422 Lotus japonicus HOM05D000005 ORTHO05D000012 3.3e-07 61.2 158 27.8
Prupe.8G111500 Prunus persica HOM05D000005 ORTHO05D000012 3.3e-07 61.2 59 54.2
PGR042G2658 Punica granatum HOM05D000005 ORTHO05D000012 3.3e-07 61.2 156 34.0
QL02p020383 Quercus lobata HOM05D000005 ORTHO05D000012 3.3e-07 61.2 63 47.6
QL11p001962 Quercus lobata HOM05D000005 ORTHO05D000012 3.3e-07 61.2 52 57.7
CsaV3_2G005030 Cucumis sativus L. HOM05D000005 ORTHO05D000012 4.4e-07 60.8 56 53.6
Eucgr.E02164 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.4e-07 60.8 133 31.6
Eucgr.E03292 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.4e-07 60.8 163 25.8
Eucgr.J02084 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.4e-07 60.8 57 52.6
Nn8g40975 Nelumbo nucifera HOM05D000005 ORTHO05D000012 4.4e-07 60.8 98 37.8
Prupe.1G018700 Prunus persica HOM05D000005 ORTHO05D000012 4.4e-07 60.8 140 32.1
Prupe.8G110800 Prunus persica HOM05D000005 ORTHO05D000012 4.4e-07 60.8 55 54.5
QL05p082988 Quercus lobata HOM05D000005 ORTHO05D000012 4.4e-07 60.8 64 46.9
QL11p025188 Quercus lobata HOM05D000005 ORTHO05D000012 4.4e-07 60.8 163 25.8
CsaV3_1G030140 Cucumis sativus L. HOM05D000005 ORTHO05D000012 5.7e-07 60.5 52 51.9
Eucgr.E03071 Eucalyptus grandis HOM05D000005 ORTHO05D000012 5.7e-07 60.5 164 26.8
FAN16G2560 Fragaria x ananassa HOM05D000005 ORTHO05D014638 5.7e-07 60.5 57 49.1
Prupe.8G026500 Prunus persica HOM05D000005 ORTHO05D000012 5.7e-07 60.5 161 29.8
ECA238G4047 Erigeron canadensis HOM05D000005 ORTHO05D000012 7.4e-07 60.1 139 30.9
Peaxi162Scf00885g00323 Petunia axillaris HOM05D000005 ORTHO05D000012 7.4e-07 60.1 137 30.7
QL02p014810 Quercus lobata HOM05D000005 ORTHO05D000012 7.4e-07 60.1 164 25.0
QL02p102304 Quercus lobata HOM05D000005 ORTHO05D002559 7.4e-07 60.1 55 47.3
QL05p028400 Quercus lobata HOM05D000005 ORTHO05D000012 7.4e-07 60.1 64 46.9
QL05p028426 Quercus lobata HOM05D000005 ORTHO05D000012 7.4e-07 60.1 64 46.9
CiPaw.15G167800 Carya illinoinensis HOM05D000005 ORTHO05D000012 9.7e-07 59.7 163 27.0
FvH4_7g21230 Fragaria vesca HOM05D000005 ORTHO05D000012 9.7e-07 59.7 171 26.9
Lj3g0020080 Lotus japonicus HOM05D000005 ORTHO05D000012 9.7e-07 59.7 158 29.7
Prupe.8G027300 Prunus persica HOM05D000005 ORTHO05D000012 9.7e-07 59.7 163 28.8
QL03p006134 Quercus lobata HOM05D000005 ORTHO05D000012 9.7e-07 59.7 55 52.7
QL11p001483 Quercus lobata HOM05D000005 ORTHO05D000012 9.7e-07 59.7 52 55.8
QL11p001544 Quercus lobata HOM05D000005 ORTHO05D000012 9.7e-07 59.7 52 55.8
QL11p007191 Quercus lobata HOM05D000005 ORTHO05D000012 9.7e-07 59.7 166 25.3
Eucgr.E03080 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.3e-06 59.3 55 54.5
Eucgr.E03087 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.3e-06 59.3 58 51.7
Eucgr.F01276 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.3e-06 59.3 163 27.0
QL03p017352 Quercus lobata HOM05D000005 ORTHO05D000012 1.3e-06 59.3 164 26.2
QL09p005364 Quercus lobata HOM05D000005 ORTHO05D000012 1.3e-06 59.3 159 27.0
QL11p038860 Quercus lobata HOM05D000005 ORTHO05D000012 1.3e-06 59.3 55 54.5
QL11p040176 Quercus lobata HOM05D000005 ORTHO05D000012 1.3e-06 59.3 55 54.5
RcHm_v2.0_Chr4g0413991 Rosa chinensis HOM05D000005 ORTHO05D000012 1.3e-06 59.3 58 55.2
Duzib268G0430 Durio zibethinus HOM05D000005 ORTHO05D000012 1.7e-06 58.9 55 47.3
Eucgr.C02718 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.7e-06 58.9 177 29.4
Manes.02G202166 Manihot esculenta HOM05D000005 ORTHO05D000012 1.7e-06 58.9 53 52.8
Prupe.8G111200 Prunus persica HOM05D000005 ORTHO05D000012 1.7e-06 58.9 59 54.2
PGR044G1140 Punica granatum HOM05D000005 ORTHO05D000239 1.7e-06 58.9 159 24.5
QL03p005139 Quercus lobata HOM05D000005 ORTHO05D000012 1.7e-06 58.9 163 25.2
QL11p002042 Quercus lobata HOM05D000005 ORTHO05D000012 1.7e-06 58.9 52 55.8
QL11p042647 Quercus lobata HOM05D000005 ORTHO05D000012 1.7e-06 58.9 60 46.7
QL11p043122 Quercus lobata HOM05D000005 ORTHO05D000012 1.7e-06 58.9 60 46.7
CiPaw.15G148300 Carya illinoinensis HOM05D000005 ORTHO05D000012 2.2e-06 58.5 58 50.0
CiPaw.15G160200 Carya illinoinensis HOM05D000005 ORTHO05D000012 2.2e-06 58.5 172 26.2
CiPaw.16G109200 Carya illinoinensis HOM05D000005 ORTHO05D000012 2.2e-06 58.5 163 27.6
Ciclev10023455m.g Citrus clementina HOM05D000005 ORTHO05D000012 2.2e-06 58.5 144 27.1
CsaV3_5G025850 Cucumis sativus L. HOM05D000005 ORTHO05D000012 2.2e-06 58.5 52 55.8
Duzib268G0041 Durio zibethinus HOM05D000005 ORTHO05D000012 2.2e-06 58.5 55 47.3
Eucgr.C01928 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.2e-06 58.5 156 28.2
Eucgr.F01261 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.2e-06 58.5 150 28.0
Gohir.D03G164266 Gossypium hirsutum HOM05D000005 ORTHO05D000012 2.2e-06 58.5 133 33.1
MD12G1193200 Malus domestica HOM05D000005 ORTHO05D000012 2.2e-06 58.5 163 28.8
Nn2g12048 Nelumbo nucifera HOM05D000005 ORTHO05D000012 2.2e-06 58.5 59 47.5
Prupe.8G005600 Prunus persica HOM05D000005 ORTHO05D000012 2.2e-06 58.5 56 50.0
Prupe.8G056700 Prunus persica HOM05D000005 ORTHO05D000012 2.2e-06 58.5 163 28.8
Prupe.8G110600 Prunus persica HOM05D000005 ORTHO05D000012 2.2e-06 58.5 60 48.3
Prupe.8G120300 Prunus persica HOM05D000005 ORTHO05D000012 2.2e-06 58.5 60 48.3
QL04p091976 Quercus lobata HOM05D000005 ORTHO05D000012 2.2e-06 58.5 163 24.5
QL07p005124 Quercus lobata HOM05D000005 ORTHO05D000012 2.2e-06 58.5 54 48.1
TPR.G21181 Trifolium pratense HOM05D000005 ORTHO05D000012 2.2e-06 58.5 158 25.9
Duzib268G1802 Durio zibethinus HOM05D000005 ORTHO05D000012 2.8e-06 58.2 52 50.0
Eucgr.E03092 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.8e-06 58.2 64 42.2
Eucgr.E03284 Eucalyptus grandis HOM05D000005 ORTHO05D000012 2.8e-06 58.2 56 50.0
Lsat_1_v5_gn_8_49901 Lactuca sativa HOM05D000005 ORTHO05D000012 2.8e-06 58.2 167 28.1
Manes.02G202100 Manihot esculenta HOM05D000005 ORTHO05D000012 2.8e-06 58.2 58 51.7
Nn1g01306 Nelumbo nucifera HOM05D000005 ORTHO05D000012 2.8e-06 58.2 59 45.8
QL09p002567 Quercus lobata HOM05D000005 ORTHO05D000012 2.8e-06 58.2 59 47.5
QL09p005202 Quercus lobata HOM05D000005 ORTHO05D000012 2.8e-06 58.2 159 26.4
QL11p043140 Quercus lobata HOM05D000005 ORTHO05D000012 2.8e-06 58.2 60 45.0
RcHm_v2.0_Chr6g0267621 Rosa chinensis HOM05D000005 ORTHO05D000012 2.8e-06 58.2 58 48.3
CSS0028975 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 3.7e-06 57.8 131 29.8
CSS0032356 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 3.7e-06 57.8 160 30.6
Duzib268G1757 Durio zibethinus HOM05D000005 ORTHO05D000012 3.7e-06 57.8 55 45.5
Eucgr.B01756 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.7e-06 57.8 172 28.5
Eucgr.E03286 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.7e-06 57.8 163 25.2
Eucgr.J01295 Eucalyptus grandis HOM05D000005 ORTHO05D000012 3.7e-06 57.8 169 30.2
Lsat_1_v5_gn_8_47361 Lactuca sativa HOM05D000005 ORTHO05D000012 3.7e-06 57.8 54 50.0
Medtr3g012470 Medicago truncatula HOM05D000005 ORTHO05D000012 3.7e-06 57.8 166 27.7
Nn3g20282 Nelumbo nucifera HOM05D000005 ORTHO05D000012 3.7e-06 57.8 160 26.9
QL03p006115 Quercus lobata HOM05D000005 ORTHO05D000012 3.7e-06 57.8 55 50.9
QL03p017232 Quercus lobata HOM05D000005 ORTHO05D000012 3.7e-06 57.8 54 50.0
QL03p017303 Quercus lobata HOM05D000005 ORTHO05D000012 3.7e-06 57.8 163 24.5
QL07p025119 Quercus lobata HOM05D000005 ORTHO05D000012 3.7e-06 57.8 162 28.4
QL10p023232 Quercus lobata HOM05D000005 ORTHO05D000012 3.7e-06 57.8 171 24.0
CSS0023467 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 4.8e-06 57.4 138 28.3
CAN.G1155.17 Capsicum annuum HOM05D000005 ORTHO05D000012 4.8e-06 57.4 163 29.4
CiPaw.15G118900 Carya illinoinensis HOM05D000005 ORTHO05D000012 4.8e-06 57.4 165 27.3
MELO3C004291.2 Cucumis melo HOM05D000005 ORTHO05D000012 4.8e-06 57.4 56 50.0
Duzib268G1112 Durio zibethinus HOM05D000005 ORTHO05D000012 4.8e-06 57.4 163 25.2
Eucgr.F01322 Eucalyptus grandis HOM05D000005 ORTHO05D000012 4.8e-06 57.4 55 49.1
FAN18G0651 Fragaria x ananassa HOM05D000005 ORTHO05D000012 4.8e-06 57.4 62 46.8
Glyma.02G077000 Glycine max HOM05D000005 ORTHO05D000012 4.8e-06 57.4 56 55.4
Lj3g0009889 Lotus japonicus HOM05D000005 ORTHO05D000012 4.8e-06 57.4 158 29.1
Prupe.8G026700 Prunus persica HOM05D000005 ORTHO05D000012 4.8e-06 57.4 163 29.4
Prupe.8G027100 Prunus persica HOM05D000005 ORTHO05D000012 4.8e-06 57.4 163 29.4
QL04p044915 Quercus lobata HOM05D000005 ORTHO05D000012 4.8e-06 57.4 56 46.4
QL04p051634 Quercus lobata HOM05D000005 ORTHO05D000012 4.8e-06 57.4 166 28.3
QL04p087751 Quercus lobata HOM05D000005 ORTHO05D000012 4.8e-06 57.4 65 43.1
QL04p089183 Quercus lobata HOM05D000005 ORTHO05D000012 4.8e-06 57.4 64 43.8
QL07p006213 Quercus lobata HOM05D000005 ORTHO05D000012 4.8e-06 57.4 64 42.2
PGSC0003DMG402026432 Solanum tuberosum HOM05D000005 ORTHO05D000012 4.8e-06 57.4 159 30.8
CiPaw.09G114100 Carya illinoinensis HOM05D000005 ORTHO05D000012 6.3e-06 57.0 57 50.9
CiPaw.09G114500 Carya illinoinensis HOM05D000005 ORTHO05D000012 6.3e-06 57.0 57 50.9
MELO3C004313.2 Cucumis melo HOM05D000005 ORTHO05D000012 6.3e-06 57.0 56 51.8
Duzib128G0571 Durio zibethinus HOM05D000005 ORTHO05D000012 6.3e-06 57.0 103 32.0
Medtr6g015435 Medicago truncatula HOM05D000005 ORTHO05D000012 6.3e-06 57.0 162 26.5
Medtr6g015490 Medicago truncatula HOM05D000005 ORTHO05D000012 6.3e-06 57.0 162 27.2
QL03p004829 Quercus lobata HOM05D000005 ORTHO05D000012 6.3e-06 57.0 164 23.8
QL03p004956 Quercus lobata HOM05D000005 ORTHO05D000012 6.3e-06 57.0 159 28.3
QL03p016978 Quercus lobata HOM05D000005 ORTHO05D000012 6.3e-06 57.0 163 24.5
QL04p075278 Quercus lobata HOM05D000005 ORTHO05D000012 6.3e-06 57.0 54 44.4
QL05p015380 Quercus lobata HOM05D000005 ORTHO05D000012 6.3e-06 57.0 53 52.8
RcHm_v2.0_Chr7g0234781 Rosa chinensis HOM05D000005 ORTHO05D000012 6.3e-06 57.0 165 29.7
RcHm_v2.0_Chr7g0241171 Rosa chinensis HOM05D000005 ORTHO05D000012 6.3e-06 57.0 60 46.7
GSVIVG01036354001 Vitis vinifera HOM05D000005 ORTHO05D000012 6.3e-06 57.0 59 47.5
CAN.G1565.21 Capsicum annuum HOM05D000005 ORTHO05D000012 8.2e-06 56.6 159 32.1
ClCG02G016100 Citrullus lanatus HOM05D000005 ORTHO05D000012 8.2e-06 56.6 52 51.9
Eucgr.C01933 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.2e-06 56.6 156 26.9
Eucgr.F01291 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.2e-06 56.6 56 50.0
FvH4_5g32970 Fragaria vesca HOM05D000005 ORTHO05D000012 8.2e-06 56.6 62 45.2
Glyma.16G159700 Glycine max HOM05D000005 ORTHO05D000012 8.2e-06 56.6 56 55.4
HanXRQChr16g0521551 Helianthus annuus HOM05D000005 ORTHO05D000012 8.2e-06 56.6 64 43.8
Lj3g0020086 Lotus japonicus HOM05D000005 ORTHO05D000012 8.2e-06 56.6 158 27.8
Phvul.004G046400 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 8.2e-06 56.6 56 55.4
QL03p000676 Quercus lobata HOM05D000005 ORTHO05D000012 8.2e-06 56.6 53 47.2
QL03p025163 Quercus lobata HOM05D000005 ORTHO05D000012 8.2e-06 56.6 55 45.5
QL03p061059 Quercus lobata HOM05D000005 ORTHO05D000012 8.2e-06 56.6 163 25.2
QL03p063741 Quercus lobata HOM05D000005 ORTHO05D000012 8.2e-06 56.6 64 43.8
QL05p015996 Quercus lobata HOM05D000005 ORTHO05D000012 8.2e-06 56.6 53 52.8
QL09p003532 Quercus lobata HOM05D000005 ORTHO05D000012 8.2e-06 56.6 163 25.2
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 8.2e-06 56.6 55 49.1
VMungo0464G0079 Vigna mungo HOM05D000005 ORTHO05D000012 8.2e-06 56.6 106 38.7


User provided reference genes

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