Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 1.6e-163 579.3 284 100.0
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 1.8e-122 443.0 281 74.7
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 1.1e-121 440.3 286 74.5
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 1.3e-120 436.8 282 74.8
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 7.0e-119 431.0 282 73.4
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 7.7e-118 427.6 281 72.6
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 2.2e-117 426.0 283 74.2
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 2.9e-117 425.6 281 72.6
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 3.8e-117 425.2 282 73.0
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 2.7e-115 419.1 282 70.6
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 1.0e-114 417.2 280 73.9
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 4.0e-114 415.2 280 70.4
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 8.8e-114 414.1 281 70.8
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 4.4e-113 411.8 281 70.8
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 4.4e-113 411.8 249 74.7
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 4.4e-113 411.8 276 70.3
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 4.4e-113 411.8 275 69.8
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 9.8e-113 410.6 283 71.0
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 2.2e-112 409.5 285 71.2
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 4.8e-112 408.3 278 70.1
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 4.8e-112 408.3 282 70.9
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 6.3e-112 407.9 285 69.5
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 8.3e-112 407.5 282 69.5
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 1.1e-111 407.1 276 69.9
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 2.4e-111 406.0 283 70.0
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 2.4e-111 406.0 261 72.8
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 2.4e-111 406.0 276 69.2
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 3.1e-111 405.6 280 68.6
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 3.1e-111 405.6 283 68.9
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 3.1e-111 405.6 240 75.8
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 3.1e-111 405.6 282 72.3
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 3.1e-111 405.6 284 69.7
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 5.4e-111 404.8 283 67.8
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 5.4e-111 404.8 283 68.9
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 7.0e-111 404.4 282 68.4
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 1.2e-110 403.7 286 71.0
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 2.0e-110 402.9 286 69.6
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 2.7e-110 402.5 282 70.2
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 2.7e-110 402.5 286 71.0
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 2.7e-110 402.5 285 67.0
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 2.7e-110 402.5 276 72.5
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 1.3e-109 400.2 285 70.2
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 1.3e-109 400.2 277 70.4
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 3.8e-109 398.7 265 70.9
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 3.8e-109 398.7 285 68.8
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 3.8e-109 398.7 286 68.9
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 6.5e-109 397.9 305 65.6
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 6.5e-109 397.9 282 68.1
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 8.5e-109 397.5 279 69.9
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.1e-108 397.1 250 75.6
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 1.1e-108 397.1 245 75.9
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 1.9e-108 396.4 253 71.5
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 4.2e-108 395.2 271 69.4
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 5.5e-108 394.8 253 72.3
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 5.5e-108 394.8 266 70.3
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 7.2e-108 394.4 275 68.4
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 7.2e-108 394.4 283 67.5
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 9.4e-108 394.0 282 69.9
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 1.6e-107 393.3 256 72.3
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 1.6e-107 393.3 270 68.5
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 2.1e-107 392.9 262 71.4
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 2.7e-107 392.5 266 70.7
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 4.7e-107 391.7 276 68.8
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 6.1e-107 391.3 266 70.3
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 1.0e-106 390.6 266 69.5
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 1.0e-106 390.6 275 66.9
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 1.0e-106 390.6 266 70.3
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 1.0e-106 390.6 266 69.5
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 1.0e-106 390.6 266 70.3
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 1.0e-106 390.6 280 67.9
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 1.8e-106 389.8 263 69.2
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 3.0e-106 389.0 268 69.4
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 6.8e-106 387.9 253 71.5
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 1.2e-105 387.1 266 70.3
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.2e-105 387.1 288 64.2
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 2.0e-105 386.3 288 64.6
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 2.0e-105 386.3 281 67.6
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 2.6e-105 386.0 277 69.3
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 5.7e-105 384.8 237 73.8
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 9.8e-105 384.0 266 68.8
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 9.8e-105 384.0 283 64.3
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 1.7e-104 383.3 315 61.6
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 1.1e-103 380.6 261 67.0
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 1.8e-103 379.8 274 67.9
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 7.0e-103 377.9 266 67.7
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 1.6e-102 376.7 284 64.4
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 4.5e-102 375.2 279 65.6
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 1.0e-101 374.0 275 65.8
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 5.0e-101 371.7 278 64.7
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 3.3e-100 369.0 205 78.5
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 3.3e-100 369.0 286 64.3
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 5.6e-100 368.2 285 64.2
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 7.2e-100 367.9 256 70.3
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 7.2e-100 367.9 253 68.4
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 2.3e-98 362.8 272 65.1
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 5.2e-98 361.7 205 75.6
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 6.8e-98 361.3 282 61.7
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 1.4e-95 353.6 191 81.2
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 7.0e-95 351.3 285 63.5
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 3.6e-91 339.0 286 59.1
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 2.7e-86 322.8 216 66.2
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 7.8e-86 321.2 207 69.1
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 2.5e-84 316.2 279 58.1
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 4.7e-83 312.0 284 56.0
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 7.5e-81 304.7 207 71.5
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 3.0e-77 292.7 209 70.3
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 3.0e-77 292.7 208 68.8
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 1.1e-76 290.8 283 49.5
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 1.1e-74 284.3 259 51.0
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 2.2e-72 276.6 284 47.5
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 2.4e-71 273.1 206 58.7
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 1.0e-69 267.7 144 81.9
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 4.3e-68 262.3 278 46.8
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 8.1e-67 258.1 215 54.0
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 4.6e-62 242.3 185 61.1
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 1.5e-57 227.3 172 60.5
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 1.1e-55 221.1 223 48.9
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 2.4e-55 219.9 255 49.4
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 7.4e-52 208.4 174 62.6
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 2.4e-47 193.4 174 55.2
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 1.8e-42 177.2 151 62.9
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 6.3e-27 125.6 85 65.9
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 1.2e-25 121.3 135 49.6
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 1.0e-16 91.7 55 72.7
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 2.3e-13 80.5 123 42.3


User provided reference genes

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