Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03868 Eucalyptus grandis HOM05D007722 ORTHO05D009730 1.5e-66 256.1 134 100.0
Eucgr.L02714 Eucalyptus grandis HOM05D007722 ORTHO05D009730 8.0e-65 250.4 134 98.5
Prupe.3G085400 Prunus persica HOM05D007722 ORTHO05D009730 2.5e-18 95.9 134 50.7
Haze_16545 Corylus avellana HOM05D007722 ORTHO05D009730 5.6e-18 94.7 139 50.4
PGR102G2260 Punica granatum HOM05D007722 ORTHO05D009730 5.6e-18 94.7 131 49.6
Cfa001975 Carpinus fangiana HOM05D007722 ORTHO05D009730 8.1e-17 90.9 118 50.8
Glyma.07G030600 Glycine max HOM05D007722 ORTHO05D009730 8.1e-17 90.9 61 73.8
Psat7g256360 Pisum sativum HOM05D007722 ORTHO05D009730 8.1e-17 90.9 132 49.2
Lalb_Chr25g0279351 Lupinus albus HOM05D007722 ORTHO05D009730 2.3e-16 89.4 90 56.7
Phvul.010G155500 Phaseolus vulgaris HOM05D007722 ORTHO05D009730 6.8e-16 87.8 80 61.2
MD17G1210100 Malus domestica HOM05D007722 ORTHO05D009730 8.9e-16 87.4 138 46.4
VMungo0331G1522 Vigna mungo HOM05D007722 ORTHO05D009730 8.9e-16 87.4 60 70.0
GSVIVG01017323001 Vitis vinifera HOM05D007722 ORTHO05D009730 1.3e-14 83.6 129 48.8
Duzib160G0092 Durio zibethinus HOM05D007722 ORTHO05D009730 2.9e-14 82.4 104 52.9
Lj3g0002989 Lotus japonicus HOM05D007722 ORTHO05D009730 2.9e-14 82.4 46 84.8
Glyma.08G212200 Glycine max HOM05D007722 ORTHO05D009730 3.7e-14 82.0 46 82.6
Medtr4g010270 Medicago truncatula HOM05D007722 ORTHO05D009730 3.7e-14 82.0 54 72.2
COL.COLO4_12955 Corchorus olitorius HOM05D007722 ORTHO05D009730 4.9e-14 81.6 105 52.4
FAN09G0448 Fragaria x ananassa HOM05D007722 ORTHO05D009730 8.4e-14 80.9 102 48.0
CiPaw.01G246700 Carya illinoinensis HOM05D007722 ORTHO05D009730 1.4e-13 80.1 131 40.5
FvH4_6g29860 Fragaria vesca HOM05D007722 ORTHO05D009730 3.2e-13 79.0 114 47.4
FAN14G1239 Fragaria x ananassa HOM05D007722 ORTHO05D009730 3.2e-13 79.0 114 47.4
QL05p029543 Quercus lobata HOM05D007722 ORTHO05D009730 1.2e-12 77.0 45 80.0
CSS0036618 Camellia sinensis var. sinensis HOM05D007722 ORTHO05D009730 6.0e-12 74.7 80 53.8
CANSAT56G0372 Cannabis sativa HOM05D007722 ORTHO05D009730 6.0e-12 74.7 128 44.5
Thecc.06G022100 Theobroma cacao HOM05D007722 ORTHO05D009730 6.0e-12 74.7 92 53.3
Potri.001G192500 Populus trichocarpa HOM05D007722 ORTHO05D009730 1.0e-11 73.9 127 43.3
Gohir.D10G075700 Gossypium hirsutum HOM05D007722 ORTHO05D009730 1.3e-11 73.6 110 42.7
Gorai.011G083600 Gossypium raimondii HOM05D007722 ORTHO05D009730 1.7e-11 73.2 110 41.8
Lalb_Chr04g0262381 Lupinus albus HOM05D007722 ORTHO05D009730 2.3e-11 72.8 80 50.0
Gohir.A10G073900 Gossypium hirsutum HOM05D007722 ORTHO05D009730 6.6e-11 71.2 110 41.8
Rhsim08G0213600 Rhododendron simsii HOM05D007722 ORTHO05D009730 6.6e-11 71.2 135 43.0
MBI01_g35411_MAGBIO Magnolia biondii HOM05D007722 ORTHO05D009730 1.5e-10 70.1 131 44.3
Gohir.A05G126200 Gossypium hirsutum HOM05D007722 ORTHO05D009730 2.5e-10 69.3 88 50.0
Oeu045155.1 Olea europaea HOM05D007722 ORTHO05D009730 2.5e-10 69.3 84 48.8
TAR636G1020 Trochodendron aralioides HOM05D007722 ORTHO05D009730 2.5e-10 69.3 69 56.5
Gohir.D05G127100 Gossypium hirsutum HOM05D007722 ORTHO05D009730 3.3e-10 68.9 88 50.0
Dinv30597 Davidia involucrata HOM05D007722 ORTHO05D009730 4.3e-10 68.6 72 52.8
Gorai.009G131200 Gossypium raimondii HOM05D007722 ORTHO05D009730 4.3e-10 68.6 88 50.0
Nn2g12058 Nelumbo nucifera HOM05D007722 ORTHO05D009730 4.3e-10 68.6 132 42.4
Sc10g0005890 Simmondsia chinensis HOM05D007722 ORTHO05D009730 4.3e-10 68.6 114 43.9
ClCG09G002890 Citrullus lanatus HOM05D007722 ORTHO05D009730 5.6e-10 68.2 50 68.0
Nitab4.5_0007793g0010 Nicotiana tabacum HOM05D007722 ORTHO05D009730 9.6e-10 67.4 48 66.7
Aqoxy7G03685 Aquilegia oxysepala HOM05D007722 ORTHO05D009730 1.2e-09 67.0 63 57.1
Migut.D01071 Erythranthe guttata HOM05D007722 ORTHO05D009730 1.2e-09 67.0 75 52.0
CDE06G0954 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 1.6e-09 66.6 73 54.8
Sed0026756 Sechium edule HOM05D007722 ORTHO05D009730 2.1e-09 66.2 127 40.9
DCAR_025509 Daucus carota HOM05D007722 ORTHO05D009730 4.7e-09 65.1 46 63.0
SGA_v2.0_scaffold37G14773 Striga asiatica HOM05D007722 ORTHO05D009730 4.7e-09 65.1 60 55.0
Nitab4.5_0011590g0030 Nicotiana tabacum HOM05D007722 ORTHO05D009730 6.2e-09 64.7 132 42.4
Manes.04G113466 Manihot esculenta HOM05D007722 ORTHO05D009730 8.1e-09 64.3 78 50.0
Sabra01G0149600 Salix brachista HOM05D007722 ORTHO05D009730 8.1e-09 64.3 42 69.0
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 1.4e-08 63.5 76 44.7
PGSC0003DMG401000617 Solanum tuberosum HOM05D007722 ORTHO05D009730 1.4e-08 63.5 100 43.0
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 1.8e-08 63.2 102 44.1
Peaxi162Scf00332g00773 Petunia axillaris HOM05D007722 ORTHO05D009730 3.1e-08 62.4 43 65.1
CDE07G1717 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 4.0e-08 62.0 73 49.3
ECA232G4504 Erigeron canadensis HOM05D000985 ORTHO05D000866 4.0e-08 62.0 59 54.2
HPP92_000666 Vanilla planifolia HOM05D007722 ORTHO05D009730 4.0e-08 62.0 71 46.5
EL10Ac9g21908 Beta vulgaris HOM05D007722 ORTHO05D009730 5.2e-08 61.6 121 42.1
Os01g0392100 Oryza sativa ssp. japonica HOM05D007722 ORTHO05D009730 5.2e-08 61.6 85 44.7
BraA01t03884Z Brassica rapa HOM05D007722 ORTHO05D009730 6.8e-08 61.2 77 41.6
unitig_0.g1117 Utricularia gibba HOM05D007722 ORTHO05D009730 6.8e-08 61.2 108 38.9
A01p38330 Brassica napus HOM05D007722 ORTHO05D009730 8.9e-08 60.8 77 45.5
HanXRQChr16g0500401 Helianthus annuus HOM05D007722 ORTHO05D009730 2.0e-07 59.7 42 69.0
Manes.11G056000 Manihot esculenta HOM05D007722 ORTHO05D009730 2.0e-07 59.7 141 41.1
BcaB04g20904 Brassica carinata HOM05D007722 ORTHO05D009730 3.4e-07 58.9 73 42.5
THA.LOC104818136 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 4.4e-07 58.5 108 44.4
BcaC09g48556 Brassica carinata HOM05D007722 ORTHO05D009730 5.8e-07 58.2 77 40.3
Sopen03g035570 Solanum pennellii HOM05D007722 ORTHO05D009730 2.2e-06 56.2 124 38.7
Solyc03g116660.3 Solanum lycopersicum HOM05D007722 ORTHO05D009730 2.9e-06 55.8 124 38.7
Zm00001eb221290 Zea mays HOM05D007722 ORTHO05D009730 6.4e-06 54.7 104 39.4


User provided reference genes

Program Settings