Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 4.6e-110 401.4 219 100.0
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 3.5e-78 295.4 219 69.4
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 3.0e-77 292.4 220 69.1
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 5.1e-77 291.6 216 70.8
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 1.1e-76 290.4 219 69.9
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 3.3e-76 288.9 222 68.5
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 9.6e-76 287.3 221 68.3
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 1.3e-75 287.0 208 71.6
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 2.1e-75 286.2 222 69.4
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 1.8e-74 283.1 210 69.0
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 3.1e-74 282.3 210 69.5
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 3.1e-74 282.3 217 67.7
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 5.3e-74 281.6 163 83.4
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 2.0e-73 279.6 217 68.2
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 2.0e-73 279.6 217 68.2
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 3.4e-73 278.9 217 67.7
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 5.8e-73 278.1 226 63.3
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 5.8e-73 278.1 226 63.3
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 7.6e-73 277.7 213 66.2
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 1.3e-72 276.9 215 67.0
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 2.9e-72 275.8 226 64.6
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 2.4e-71 272.7 209 68.4
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 3.2e-71 272.3 216 63.9
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 3.2e-71 272.3 218 66.1
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 4.2e-71 271.9 208 67.3
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 5.5e-71 271.6 209 67.9
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.2e-70 270.4 209 67.9
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 2.7e-70 269.2 209 69.4
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 4.6e-70 268.5 218 62.8
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 4.6e-70 268.5 220 65.9
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 7.9e-70 267.7 215 64.7
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 7.9e-70 267.7 208 67.8
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 1.3e-69 266.9 220 70.5
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.3e-69 266.9 207 67.1
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 1.3e-69 266.9 219 63.9
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 1.8e-69 266.5 205 66.8
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 2.3e-69 266.2 219 65.3
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 3.0e-69 265.8 210 65.7
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 3.9e-69 265.4 214 66.8
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 3.9e-69 265.4 210 71.9
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 3.9e-69 265.4 211 66.8
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 5.1e-69 265.0 211 68.2
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 1.9e-68 263.1 164 80.5
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 1.9e-68 263.1 209 66.0
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 1.9e-68 263.1 146 84.9
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 3.3e-68 262.3 210 65.7
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 1.3e-67 260.4 211 64.5
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 2.1e-67 259.6 217 65.0
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 2.1e-67 259.6 208 65.9
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 4.8e-67 258.5 165 75.8
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 4.8e-67 258.5 208 63.5
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 8.1e-67 257.7 211 63.5
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 1.1e-66 257.3 218 62.8
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 1.4e-66 256.9 208 64.9
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 1.8e-66 256.5 208 65.4
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 2.4e-66 256.1 217 62.2
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 3.1e-66 255.8 208 64.4
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 6.9e-66 254.6 219 61.2
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 1.2e-65 253.8 173 71.7
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 1.5e-65 253.4 214 64.0
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 1.5e-65 253.4 219 62.1
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 2.0e-65 253.1 151 79.5
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 2.6e-65 252.7 214 61.7
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 2.6e-65 252.7 214 61.7
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 2.6e-65 252.7 214 61.7
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 2.6e-65 252.7 218 61.9
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 4.5e-65 251.9 214 61.7
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 7.6e-65 251.1 150 78.7
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 7.6e-65 251.1 206 63.6
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 1.3e-64 250.4 151 79.5
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 1.3e-64 250.4 200 64.5
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 1.7e-64 250.0 214 60.7
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 1.7e-64 250.0 214 61.2
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 2.2e-64 249.6 219 60.3
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 3.8e-64 248.8 151 78.1
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 3.8e-64 248.8 212 62.3
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 4.9e-64 248.4 152 78.9
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 4.9e-64 248.4 219 62.6
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 6.5e-64 248.1 151 77.5
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 1.1e-63 247.3 219 61.6
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 3.2e-63 245.7 206 64.6
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 3.2e-63 245.7 142 82.4
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 2.7e-62 242.7 156 78.8
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 3.5e-62 242.3 211 62.1
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 3.5e-62 242.3 137 82.5
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 6.0e-62 241.5 211 62.1
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.9e-62 241.1 137 82.5
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 7.9e-62 241.1 129 86.8
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 1.0e-61 240.7 212 67.5
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.8e-61 240.0 234 59.8
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 1.3e-59 233.8 125 84.8
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.2e-57 227.3 209 60.8
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 6.5e-56 221.5 147 72.1
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 5.5e-55 218.4 170 64.1
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 1.2e-54 217.2 178 63.5
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 8.7e-53 211.1 138 73.9
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 5.7e-52 208.4 129 76.7
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 5.7e-44 181.8 148 64.2
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 7.4e-44 181.4 143 62.2
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 6.9e-42 174.9 134 63.4
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 2.6e-41 172.9 156 59.6
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 1.3e-40 170.6 127 63.0
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 5.5e-39 165.2 89 86.5
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 1.4e-37 160.6 129 60.5
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 6.7e-37 158.3 128 59.4
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 7.4e-36 154.8 140 62.1
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 1.1e-34 151.0 182 48.4
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 5.7e-28 128.6 86 74.4
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 1.7e-27 127.1 153 47.7
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 9.4e-23 111.3 77 71.4
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 9.5e-15 84.7 141 40.4


User provided reference genes

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