Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.6e-61 239.2 114 100.0
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 7.8e-45 183.7 114 74.6
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 7.8e-45 183.7 114 74.6
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 8.6e-44 180.3 112 76.8
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 1.5e-43 179.5 112 75.9
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 7.3e-43 177.2 110 72.7
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 1.2e-42 176.4 113 73.5
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 2.1e-42 175.6 108 77.8
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 1.1e-41 173.3 106 72.6
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 1.4e-41 172.9 112 70.5
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 1.8e-41 172.6 101 76.2
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 2.3e-41 172.2 112 71.4
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 3.1e-41 171.8 100 77.0
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 4.0e-41 171.4 111 71.2
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 5.2e-41 171.0 112 68.8
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 6.8e-41 170.6 111 66.7
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 6.8e-41 170.6 112 70.5
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 8.9e-41 170.2 114 68.4
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 1.2e-40 169.9 110 69.1
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 2.0e-40 169.1 110 70.0
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 2.0e-40 169.1 110 68.2
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 3.4e-40 168.3 109 68.8
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 7.5e-40 167.2 112 68.8
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 7.5e-40 167.2 102 72.5
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 1.3e-39 166.4 109 70.6
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 1.7e-39 166.0 112 67.9
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 2.2e-39 165.6 127 63.0
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 2.9e-39 165.2 114 68.4
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 2.9e-39 165.2 101 71.3
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 2.9e-39 165.2 112 67.9
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 3.7e-39 164.9 112 65.2
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 6.4e-39 164.1 112 67.9
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 6.4e-39 164.1 107 71.0
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 8.3e-39 163.7 103 69.9
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 8.3e-39 163.7 101 69.3
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 1.1e-38 163.3 114 66.7
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 1.4e-38 162.9 110 69.1
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 1.4e-38 162.9 101 68.3
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 1.9e-38 162.5 101 70.3
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 2.4e-38 162.2 113 68.1
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 4.1e-38 161.4 115 67.0
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 7.1e-38 160.6 110 65.5
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 7.1e-38 160.6 113 67.3
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 1.2e-37 159.8 109 69.7
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 2.1e-37 159.1 105 68.6
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 2.1e-37 159.1 98 74.5
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 2.1e-37 159.1 112 65.2
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 4.6e-37 157.9 99 68.7
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 6.0e-37 157.5 118 61.0
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 6.0e-37 157.5 99 67.7
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 7.8e-37 157.1 110 67.3
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 7.8e-37 157.1 109 67.9
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 7.8e-37 157.1 111 65.8
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 3.0e-36 155.2 111 65.8
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 3.9e-36 154.8 99 68.7
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 3.9e-36 154.8 99 68.7
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 3.9e-36 154.8 99 68.7
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 5.1e-36 154.5 101 67.3
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 8.6e-36 153.7 103 67.0
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 8.6e-36 153.7 109 65.1
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 1.1e-35 153.3 106 68.9
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 1.9e-35 152.5 101 63.4
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 1.9e-35 152.5 105 64.8
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 2.5e-35 152.1 118 60.2
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 3.3e-35 151.8 103 68.9
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 3.3e-35 151.8 112 62.5
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 4.3e-35 151.4 112 63.4
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 5.6e-35 151.0 112 62.5
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 5.6e-35 151.0 112 62.5
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 7.3e-35 150.6 109 60.6
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 9.5e-35 150.2 113 61.9
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 1.2e-34 149.8 109 64.2
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.6e-34 149.4 113 61.1
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 1.6e-34 149.4 99 66.7
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 2.1e-34 149.1 95 67.4
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 2.8e-34 148.7 112 61.6
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 2.8e-34 148.7 112 61.6
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 3.6e-34 148.3 101 64.4
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 4.7e-34 147.9 147 52.4
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 6.2e-34 147.5 90 70.0
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 6.2e-34 147.5 107 63.6
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 8.1e-34 147.1 99 65.7
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 1.4e-33 146.4 95 66.3
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 1.4e-33 146.4 91 70.3
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 3.1e-33 145.2 99 63.6
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 6.8e-33 144.1 99 63.6
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 8.9e-33 143.7 107 64.5
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 1.2e-32 143.3 93 64.5
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 1.2e-32 143.3 93 64.5
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 2.0e-32 142.5 93 64.5
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 3.4e-32 141.7 95 63.2
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 7.6e-32 140.6 95 63.2
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 1.7e-31 139.4 93 63.4
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 1.7e-31 139.4 93 63.4
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.7e-31 139.4 95 63.2
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 6.4e-31 137.5 93 63.4
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 1.7e-28 129.4 90 67.8
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 3.0e-28 128.6 88 70.5
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.1e-27 126.7 106 66.0
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 3.3e-27 125.2 88 69.3
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 7.3e-27 124.0 82 69.5
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 9.6e-27 123.6 108 51.9
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 1.8e-25 119.4 68 73.5
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 1.8e-25 119.4 68 77.9
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 8.9e-25 117.1 63 87.3
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 1.5e-24 116.3 84 69.0
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 4.9e-23 111.3 98 54.1
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 1.2e-21 106.7 71 69.0
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 2.1e-21 105.9 110 48.2
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 2.7e-21 105.5 85 60.0
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 6.0e-21 104.4 72 65.3
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 7.8e-21 104.0 65 70.8
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 1.7e-20 102.8 92 46.7
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 9.6e-19 97.1 105 42.9
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 8.1e-18 94.0 98 44.9
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 3.4e-16 88.6 62 59.7
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 4.6e-13 78.2 63 50.8
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 6.7e-12 74.3 61 55.7
MCO09G076 Micromonas commoda HOM05D006879 ORTHO05D008452 7.1e-06 54.3 69 42.0


User provided reference genes

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