Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 5.2e-156 554.3 272 100.0
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 1.3e-101 373.6 251 71.3
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 4.8e-101 371.7 253 71.5
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 1.1e-100 370.5 256 71.9
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 3.1e-100 369.0 250 70.8
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 9.1e-100 367.5 258 67.8
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 9.1e-100 367.5 255 70.2
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 2.0e-99 366.3 249 71.1
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 2.0e-99 366.3 249 72.7
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 5.9e-99 364.8 249 71.1
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 7.7e-99 364.4 251 71.3
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 7.7e-99 364.4 255 70.2
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 1.7e-98 363.2 255 69.8
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 2.2e-98 362.8 247 72.5
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 3.8e-98 362.1 247 72.5
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 3.8e-98 362.1 250 72.0
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 1.1e-97 360.5 249 70.3
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 2.5e-97 359.4 256 70.3
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 2.5e-97 359.4 255 68.6
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 3.2e-97 359.0 255 69.8
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 2.1e-96 356.3 259 69.5
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 2.1e-96 356.3 251 70.5
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 6.1e-96 354.8 254 70.1
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 2.3e-95 352.8 253 69.2
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 3.0e-95 352.4 251 70.9
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 6.7e-95 351.3 254 69.3
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 6.7e-95 351.3 255 69.0
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 6.7e-95 351.3 255 67.8
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 6.7e-95 351.3 250 70.4
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 1.1e-94 350.5 255 67.1
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 1.1e-94 350.5 253 68.0
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 2.0e-94 349.7 255 67.5
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 2.6e-94 349.4 255 68.2
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 2.6e-94 349.4 247 70.0
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 3.3e-94 349.0 255 68.6
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 5.7e-94 348.2 237 71.3
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 7.4e-94 347.8 253 68.0
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 7.4e-94 347.8 255 67.1
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.3e-93 347.1 254 68.1
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 1.3e-93 347.1 260 66.2
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 2.2e-93 346.3 265 64.9
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 3.7e-93 345.5 255 67.5
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 6.3e-93 344.7 255 67.5
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 8.2e-93 344.4 253 68.0
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 1.1e-92 344.0 255 67.5
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 1.4e-92 343.6 261 66.7
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 3.1e-92 342.4 250 66.0
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 5.3e-92 341.7 255 66.3
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 1.2e-91 340.5 255 66.3
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 4.5e-91 338.6 254 68.1
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 7.7e-91 337.8 260 66.5
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 7.7e-91 337.8 253 66.0
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 1.0e-90 337.4 264 64.0
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 1.3e-90 337.0 256 63.7
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 1.7e-90 336.7 251 66.9
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 1.1e-89 334.0 252 67.1
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 1.5e-89 333.6 238 68.1
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 1.9e-89 333.2 225 70.7
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 2.5e-89 332.8 249 65.1
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 2.5e-89 332.8 216 74.1
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 2.5e-89 332.8 251 62.5
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 3.2e-89 332.4 254 63.8
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 4.2e-89 332.0 216 74.1
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 4.2e-89 332.0 253 65.2
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 1.2e-88 330.5 215 73.0
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 1.6e-88 330.1 254 65.4
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 2.1e-88 329.7 247 64.4
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 3.6e-88 328.9 227 71.4
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 3.6e-88 328.9 227 70.0
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 4.7e-88 328.6 233 70.4
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 6.1e-88 328.2 253 61.7
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 8.0e-88 327.8 227 71.4
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 8.0e-88 327.8 242 66.5
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 1.4e-87 327.0 228 70.2
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 1.4e-87 327.0 228 70.2
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 1.4e-87 327.0 228 70.2
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 1.4e-87 327.0 248 62.5
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 1.8e-87 326.6 228 69.7
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 1.8e-87 326.6 233 67.0
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 2.3e-87 326.2 228 69.3
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 3.0e-87 325.9 215 71.6
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 6.7e-87 324.7 214 72.0
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 8.8e-87 324.3 249 63.9
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 8.8e-87 324.3 226 71.7
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 8.8e-87 324.3 225 69.3
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 1.1e-86 323.9 235 69.8
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 3.3e-86 322.4 215 71.2
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 5.7e-86 321.6 223 70.4
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 1.3e-85 320.5 248 61.3
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 2.8e-85 319.3 252 63.9
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 3.7e-85 318.9 228 67.5
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 4.8e-85 318.5 215 68.4
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 4.8e-85 318.5 233 65.7
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 9.1e-84 314.3 227 66.5
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 9.1e-84 314.3 228 66.2
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 9.1e-84 314.3 227 66.5
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 9.1e-84 314.3 227 66.5
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 9.1e-84 314.3 211 71.1
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 1.2e-83 313.9 253 61.3
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 3.5e-83 312.4 250 62.4
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 3.5e-83 312.4 211 70.1
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 3.5e-83 312.4 217 70.5
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 1.3e-82 310.5 227 64.8
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 6.5e-82 308.1 249 61.4
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 8.5e-82 307.8 249 61.8
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 3.2e-81 305.8 217 69.1
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 4.2e-81 305.4 239 61.9
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 1.6e-80 303.5 247 60.7
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 8.0e-80 301.2 246 59.3
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 9.8e-78 294.3 256 57.4
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 2.2e-77 293.1 255 57.6
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 9.1e-76 287.7 220 63.6
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 2.2e-74 283.1 208 65.9
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 1.1e-73 280.8 252 54.8
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 3.0e-71 272.7 210 60.5
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 2.6e-70 269.6 225 60.9
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 1.8e-68 263.5 178 68.5
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 6.6e-66 255.0 249 55.0
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 1.8e-60 236.9 185 62.7
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 7.8e-59 231.5 167 68.3
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 3.1e-47 193.0 213 48.4
CSS0000171 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 1.3e-45 187.6 137 64.2
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 6.0e-43 178.7 144 61.1
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 8.6e-42 174.9 161 54.7
Potri.003G157201 Populus trichocarpa HOM05D006345 ORTHO05D007428 1.6e-35 154.1 115 66.1
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 4.0e-31 139.4 167 47.9
Sabra03G0114100 Salix brachista HOM05D000029 ORTHO05D000854 2.3e-26 123.6 193 38.3
Zm00001eb356470 Zea mays HOM05D006345 ORTHO05D007428 5.1e-26 122.5 108 57.4
ATR0006G036 Amborella trichopoda HOM05D006345 ORTHO05D007428 4.6e-11 72.8 50 66.0
Lj1P1152T38 Lonicera japonica HOM05D006345 ORTHO05D007428 2.5e-09 67.0 44 68.2
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 1.2e-06 58.2 49 55.1


User provided reference genes

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