Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03782 Eucalyptus grandis HOM05D004094 ORTHO05D004601 0.0e+00 1123.2 559 100.0
QL09p035258 Quercus lobata HOM05D004094 ORTHO05D004601 6.8e-102 375.6 569 42.4
Haze_00454 Corylus avellana HOM05D004094 ORTHO05D004601 6.2e-95 352.4 569 42.5
Cfa016008 Carpinus fangiana HOM05D004094 ORTHO05D004601 4.4e-93 346.3 571 41.3
Thecc.08G123800 Theobroma cacao HOM05D004094 ORTHO05D004601 3.9e-89 333.2 575 39.5
TAR625G0515 Trochodendron aralioides HOM05D004094 ORTHO05D004601 4.8e-87 326.2 580 39.0
PGR042G1714 Punica granatum HOM05D004094 ORTHO05D004601 6.2e-87 325.9 536 40.7
Prupe.1G499900 Prunus persica HOM05D004094 ORTHO05D004601 3.1e-86 323.6 562 37.5
Gohir.D06G044700 Gossypium hirsutum HOM05D004094 ORTHO05D004601 2.0e-85 320.9 583 38.8
Gorai.010G049800 Gossypium raimondii HOM05D004094 ORTHO05D004601 2.6e-85 320.5 583 38.8
Gohir.A06G043800 Gossypium hirsutum HOM05D004094 ORTHO05D004601 1.3e-84 318.2 584 38.4
vmacro12538 Vaccinium macrocarpon HOM05D004094 ORTHO05D004601 1.4e-83 314.7 569 38.0
Rhsim06G0104600 Rhododendron simsii HOM05D004094 ORTHO05D004601 1.9e-83 314.3 569 37.8
Potri.005G177000 Populus trichocarpa HOM05D004094 ORTHO05D004601 1.3e-81 308.1 570 36.7
Dinv07237 Davidia involucrata HOM05D004094 ORTHO05D004601 6.7e-81 305.8 572 37.9
GSVIVG01008880001 Vitis vinifera HOM05D004094 ORTHO05D004601 2.4e-78 297.4 574 36.4
Sabra05G0133600 Salix brachista HOM05D004094 ORTHO05D004601 3.1e-78 297.0 578 36.3
CSS0004297 Camellia sinensis var. sinensis HOM05D004094 ORTHO05D004601 6.9e-78 295.8 607 36.6
Potri.002G084700 Populus trichocarpa HOM05D004094 ORTHO05D004601 1.0e-76 292.0 573 37.5
MD15G1351000 Malus domestica HOM05D004094 ORTHO05D004601 4.9e-76 289.7 567 36.2
Nn1g08759 Nelumbo nucifera HOM05D004094 ORTHO05D004601 1.9e-75 287.7 583 36.5
Ciclev10000067m.g Citrus clementina HOM05D004094 ORTHO05D004601 7.1e-75 285.8 580 36.4
PSO170G3655 Papaver somniferum HOM05D004094 ORTHO05D004601 9.3e-75 285.4 588 36.7
PSO782G4804 Papaver somniferum HOM05D004094 ORTHO05D004601 7.9e-74 282.3 587 36.5
Sabra02G0066100 Salix brachista HOM05D004094 ORTHO05D004601 1.0e-73 282.0 568 36.6
Manes.02G162400 Manihot esculenta HOM05D004094 ORTHO05D004601 1.8e-73 281.2 569 35.3
RcHm_v2.0_Chr6g0295641 Rosa chinensis HOM05D004094 ORTHO05D004601 1.3e-71 275.0 600 35.0
Aqoxy6G00193 Aquilegia oxysepala HOM05D004094 ORTHO05D004601 1.4e-70 271.6 603 33.3
Lj1g0022360 Lotus japonicus HOM05D004094 ORTHO05D004601 4.0e-70 270.0 575 36.0
FAN20G1705 Fragaria x ananassa HOM05D004094 ORTHO05D004601 5.3e-70 269.6 588 34.7
TWI12G0492 Tripterygium wilfordii HOM05D004094 ORTHO05D004601 9.0e-70 268.9 561 36.4
Oeu047946.1 Olea europaea HOM05D004094 ORTHO05D004601 1.2e-69 268.5 592 36.3
Ca_15191_v3 Cicer arietinum L. HOM05D004094 ORTHO05D004601 1.5e-69 268.1 569 36.6
Cc00_g04280 Coffea canephora HOM05D004094 ORTHO05D004601 7.6e-69 265.8 577 34.8
Medtr3g072400 Medicago truncatula HOM05D004094 ORTHO05D004601 2.2e-68 264.2 581 34.6
Glyma.06G112600 Glycine max HOM05D004094 ORTHO05D004601 1.1e-67 261.9 566 35.9
CsaV3_4G028330 Cucumis sativus L. HOM05D004094 ORTHO05D004601 1.4e-67 261.5 568 35.7
Migut.C01138 Erythranthe guttata HOM05D004094 ORTHO05D004601 3.2e-67 260.4 567 35.3
Glyma.04G250200 Glycine max HOM05D004094 ORTHO05D004601 6.1e-66 256.1 571 34.9
FAN24G0267 Fragaria x ananassa HOM05D004094 ORTHO05D004601 1.8e-65 254.6 579 34.7
FvH4_2g26770 Fragaria vesca HOM05D004094 ORTHO05D004601 2.3e-65 254.2 579 34.7
arahy.Tifrunner.gnm1.ann1.WV2Q7U Arachis hypogaea HOM05D004094 ORTHO05D004601 8.7e-65 252.3 571 35.2
FAN15G0810 Fragaria x ananassa HOM05D004094 ORTHO05D004601 8.7e-65 252.3 584 34.4
FAN20G0223 Fragaria x ananassa HOM05D004094 ORTHO05D004601 8.7e-65 252.3 584 34.4
CiPaw.05G222800 Carya illinoinensis HOM05D004094 ORTHO05D004601 5.7e-64 249.6 463 39.1
arahy.Tifrunner.gnm1.ann1.1LZC07 Arachis hypogaea HOM05D004094 ORTHO05D004601 7.4e-64 249.2 577 35.2
Lalb_Chr23g0271001 Lupinus albus HOM05D004094 ORTHO05D004601 1.3e-63 248.4 580 34.0
ClCG11G015680 Citrullus lanatus HOM05D004094 ORTHO05D004601 1.6e-63 248.1 565 33.8
Peaxi162Scf00051g00911 Petunia axillaris HOM05D004094 ORTHO05D004601 1.6e-63 248.1 577 33.3
DCAR_014092 Daucus carota HOM05D004094 ORTHO05D004601 6.9e-62 242.7 612 32.5
FAN27G0677 Fragaria x ananassa HOM05D004094 ORTHO05D004601 6.9e-62 242.7 584 33.6
Lalb_Chr04g0253401 Lupinus albus HOM05D004094 ORTHO05D004601 1.5e-61 241.5 586 33.8
Phvul.009G124500 Phaseolus vulgaris HOM05D004094 ORTHO05D004601 2.0e-61 241.1 569 33.6
Nitab4.5_0000633g0220 Nicotiana tabacum HOM05D004094 ORTHO05D004601 2.6e-61 240.7 587 33.2
Psat5g131960 Pisum sativum HOM05D004094 ORTHO05D004601 2.6e-61 240.7 581 33.7
Nitab4.5_0004044g0030 Nicotiana tabacum HOM05D004094 ORTHO05D004601 1.3e-60 238.4 581 32.7
Ca_14821_v3 Cicer arietinum L. HOM05D004094 ORTHO05D004601 3.8e-60 236.9 559 34.0
ECA234G0673 Erigeron canadensis HOM05D004094 ORTHO05D004601 3.6e-58 230.3 579 33.7
CANSAT64G2400 Cannabis sativa HOM05D004094 ORTHO05D004601 4.6e-58 229.9 567 34.0
MELO3C010472.2 Cucumis melo HOM05D004094 ORTHO05D004601 6.1e-58 229.6 570 32.8
VMungo1309G1727 Vigna mungo HOM05D004094 ORTHO05D004601 3.9e-57 226.9 565 32.4
MSTRG.1451 Avicennia marina HOM05D004094 ORTHO05D004601 2.0e-56 224.6 573 33.5
Sc23g0000720 Simmondsia chinensis HOM05D004094 ORTHO05D004601 2.0e-56 224.6 746 29.1
Sopen06g020480 Solanum pennellii HOM05D004094 ORTHO05D004601 1.7e-55 221.5 612 31.0
THA.LOC104800189 Tarenaya hassleriana HOM05D004094 ORTHO05D004601 3.7e-55 220.3 566 31.1
Medtr1g030410 Medicago truncatula HOM05D004094 ORTHO05D004601 1.4e-54 218.4 566 33.0
TPR.G25784 Trifolium pratense HOM05D004094 ORTHO05D004601 1.4e-54 218.4 569 33.2
Duzib093G2002 Durio zibethinus HOM05D004094 ORTHO05D004601 1.8e-54 218.0 389 39.1
Psat6g041960 Pisum sativum HOM05D004094 ORTHO05D004601 1.8e-54 218.0 568 32.4
TPR.G24027 Trifolium pratense HOM05D004094 ORTHO05D004601 4.1e-54 216.9 554 33.2
Solyc06g060350.4 Solanum lycopersicum HOM05D004094 ORTHO05D004601 3.4e-53 213.8 604 30.5
Ca_12613_v3 Cicer arietinum L. HOM05D004094 ORTHO05D004601 1.1e-51 208.8 562 31.7
SGA_v2.0_scaffold24G10467 Striga asiatica HOM05D004094 ORTHO05D004601 9.4e-51 205.7 579 30.9
DCAR_017419 Daucus carota HOM05D004094 ORTHO05D004601 2.7e-50 204.1 617 28.7
COL.COLO4_35940 Corchorus olitorius HOM05D004094 ORTHO05D004601 3.6e-50 203.8 423 36.4
Sed0014690 Sechium edule HOM05D004094 ORTHO05D004601 3.6e-50 203.8 564 29.4
Glyma.14G148700 Glycine max HOM05D004094 ORTHO05D004601 4.7e-50 203.4 574 31.7
Lj1g0018898 Lotus japonicus HOM05D004094 ORTHO05D004601 6.1e-50 203.0 594 30.8
TWI36G0382 Tripterygium wilfordii HOM05D004094 ORTHO05D004601 5.7e-48 196.4 498 32.5
Lsat_1_v5_gn_5_126560 Lactuca sativa HOM05D004094 ORTHO05D004601 1.4e-46 191.8 557 32.1
Sed0015071 Sechium edule HOM05D004094 ORTHO05D004601 5.3e-46 189.9 570 30.4
Aa31LG4G7730 Aethionema arabicum HOM05D004094 ORTHO05D004601 9.1e-46 189.1 566 28.8
Sp5g32780 Schrenkiella parvula HOM05D004094 ORTHO05D004601 7.7e-45 186.0 575 29.4
Thhalv10018028m.g Eutrema salsugineum HOM05D004094 ORTHO05D004601 2.2e-44 184.5 570 29.6
Phvul.008G163600 Phaseolus vulgaris HOM05D004094 ORTHO05D004601 6.5e-44 183.0 596 29.0
CARHR071130 Cardamine hirsuta HOM05D004094 ORTHO05D004601 8.5e-44 182.6 558 30.3
AL142U10030 Arabidopsis lyrata HOM05D004094 ORTHO05D004601 1.1e-43 182.2 570 29.8
HanXRQChr10g0304931 Helianthus annuus HOM05D004094 ORTHO05D004601 1.1e-43 182.2 566 29.7
Duzib041G0387 Durio zibethinus HOM05D004094 ORTHO05D004601 1.9e-43 181.4 354 36.2
AL2G37830 Arabidopsis lyrata HOM05D004094 ORTHO05D004601 4.2e-43 180.3 570 28.4
Carub.0002s2451 Capsella rubella HOM05D004094 ORTHO05D004601 4.2e-43 180.3 570 28.9
ATR0684G176 Amborella trichopoda HOM05D004094 ORTHO05D004601 1.6e-42 178.3 592 28.9
HPP92_002183 Vanilla planifolia HOM05D004094 ORTHO05D004601 1.6e-42 178.3 573 27.1
AT1G77620 Arabidopsis thaliana HOM05D004094 ORTHO05D004601 2.7e-42 177.6 564 29.1
PGSC0003DMG400017557 Solanum tuberosum HOM05D004094 ORTHO05D004601 1.8e-41 174.9 280 37.5
BcaB05g25063 Brassica carinata HOM05D004094 ORTHO05D004601 3.9e-41 173.7 569 30.2
SalBow7G0426 Salvia bowleyana HOM05D004094 ORTHO05D004601 1.1e-40 172.2 566 29.5
unitig_26.g9911 Utricularia gibba HOM05D004094 ORTHO05D004601 3.3e-40 170.6 571 29.2
BcaC08g47600 Brassica carinata HOM05D004094 ORTHO05D004601 5.7e-40 169.9 558 28.3
BolC6t40183H Brassica oleracea HOM05D004094 ORTHO05D004601 5.7e-40 169.9 558 28.3
BraA07t31822Z Brassica rapa HOM05D004094 ORTHO05D004601 5.7e-40 169.9 560 29.5
Hund16854 Selenicereus undatus HOM05D004094 ORTHO05D004601 7.4e-40 169.5 450 32.2
A07p43010 Brassica napus HOM05D004094 ORTHO05D004601 4.8e-39 166.8 556 29.1
Sc01g0001180 Simmondsia chinensis HOM05D004094 ORTHO05D004601 5.9e-37 159.8 428 33.2
Lj7A339G40 Lonicera japonica HOM05D004094 ORTHO05D004601 1.3e-36 158.7 397 33.5
BcaC03g15753 Brassica carinata HOM05D004094 ORTHO05D004601 2.9e-36 157.5 553 29.3
AUR62019047 Chenopodium quinoa HOM05D004094 ORTHO05D004601 2.9e-36 157.5 372 34.1
AUR62027887 Chenopodium quinoa HOM05D004094 ORTHO05D004601 3.8e-36 157.1 381 33.1
EL10Ac1g01050 Beta vulgaris HOM05D004094 ORTHO05D004601 1.2e-34 152.1 386 30.1
Cpa.g.sc36.56 Carica papaya HOM05D004094 ORTHO05D004601 1.6e-34 151.8 571 29.1
VMungo0647G0510 Vigna mungo HOM05D004094 ORTHO05D004601 2.1e-34 151.4 531 28.4
arahy.Tifrunner.gnm1.ann1.3295S8 Arachis hypogaea HOM05D004094 ORTHO05D004601 3.0e-33 147.5 571 28.2
arahy.Tifrunner.gnm1.ann1.HK9WB5 Arachis hypogaea HOM05D004094 ORTHO05D004601 4.0e-33 147.1 571 28.0
Dinv27324 Davidia involucrata HOM05D004094 ORTHO05D004601 4.0e-33 147.1 190 44.2
Os03g0262300 Oryza sativa ssp. japonica HOM05D004094 ORTHO05D004601 4.0e-33 147.1 597 26.0
VMungo1383G1238 Vigna mungo HOM05D004094 ORTHO05D004601 4.4e-32 143.7 407 30.7
Zm00001eb398150 Zea mays HOM05D004094 ORTHO05D004601 1.8e-30 138.3 570 26.5
CDE06G0603 Ceratophyllum demersum HOM05D001730 ORTHO05D005730 2.4e-30 137.9 539 26.3
C06p51630 Brassica napus HOM05D004094 ORTHO05D004601 1.2e-29 135.6 418 28.7
Duzib093G1173 Durio zibethinus HOM05D004094 ORTHO05D004601 1.3e-28 132.1 164 42.1
Actinidia02614 Actinidia chinensis HOM05D004094 ORTHO05D004601 1.2e-26 125.6 262 33.2
BolC2t09506H Brassica oleracea HOM05D004094 ORTHO05D004601 1.2e-21 109.0 457 28.0
C02p34910 Brassica napus HOM05D004094 ORTHO05D004601 5.5e-19 100.1 371 29.6
SHI23041 Sapria himalayana HOM05D004094 ORTHO05D004601 8.0e-18 96.3 387 29.7
Lj7A339G41 Lonicera japonica HOM05D004094 ORTHO05D004601 5.4e-14 83.6 79 55.7
Psat1g217360 Pisum sativum HOM05D004094 ORTHO05D004601 2.3e-12 78.2 141 34.8
Actinidia02613 Actinidia chinensis HOM05D004094 ORTHO05D004601 6.6e-12 76.6 330 24.5
SHI23040 Sapria himalayana HOM05D004094 ORTHO05D004601 3.3e-11 74.3 81 44.4


User provided reference genes

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