Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 2.6e-46 188.3 95 100.0
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 1.2e-38 162.9 94 86.2
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 2.6e-38 161.8 95 85.3
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 3.4e-38 161.4 95 85.3
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 5.9e-38 160.6 94 88.3
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 7.7e-38 160.2 95 85.3
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 7.7e-38 160.2 95 85.3
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 2.2e-37 158.7 95 87.4
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 3.8e-37 157.9 95 84.2
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 5.0e-37 157.5 95 82.1
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 8.5e-37 156.8 95 83.2
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 8.5e-37 156.8 95 83.2
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 2.5e-36 155.2 95 81.1
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 3.2e-36 154.8 95 82.1
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 7.2e-36 153.7 89 85.4
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 7.2e-36 153.7 93 82.8
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 9.4e-36 153.3 96 83.3
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 9.4e-36 153.3 93 83.9
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 1.2e-35 152.9 93 81.7
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.6e-35 152.5 87 85.1
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.6e-35 152.5 87 85.1
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 2.1e-35 152.1 89 85.4
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 2.1e-35 152.1 95 80.0
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 2.7e-35 151.8 95 83.2
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 2.7e-35 151.8 97 83.5
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 3.6e-35 151.4 91 83.5
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 3.6e-35 151.4 95 84.2
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 3.6e-35 151.4 86 84.9
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 4.7e-35 151.0 95 84.2
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 7.9e-35 150.2 90 85.6
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 7.9e-35 150.2 95 82.1
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 7.9e-35 150.2 95 83.2
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 7.9e-35 150.2 94 84.0
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 7.9e-35 150.2 90 84.4
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 7.9e-35 150.2 94 83.0
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 1.0e-34 149.8 86 87.2
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 1.0e-34 149.8 95 80.0
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 1.0e-34 149.8 96 79.2
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 1.0e-34 149.8 95 80.0
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 1.4e-34 149.4 92 82.6
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 1.8e-34 149.1 92 78.3
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 1.8e-34 149.1 84 86.9
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 2.3e-34 148.7 86 84.9
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.3e-34 148.7 83 86.7
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 3.0e-34 148.3 95 82.1
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 3.0e-34 148.3 84 90.5
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 3.9e-34 147.9 84 85.7
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 3.9e-34 147.9 95 74.7
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 5.2e-34 147.5 83 85.5
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 6.7e-34 147.1 93 81.7
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 8.8e-34 146.7 95 82.1
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 8.8e-34 146.7 91 79.1
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 8.8e-34 146.7 91 79.1
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 8.8e-34 146.7 81 87.7
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 1.1e-33 146.4 83 85.5
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 1.1e-33 146.4 96 80.2
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 1.5e-33 146.0 89 80.9
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 2.0e-33 145.6 94 79.8
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.0e-33 145.6 93 78.5
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 2.6e-33 145.2 92 79.3
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 2.6e-33 145.2 89 79.8
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 3.3e-33 144.8 93 78.5
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 4.4e-33 144.4 94 80.9
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 5.7e-33 144.1 79 86.1
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 7.4e-33 143.7 87 80.5
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 7.4e-33 143.7 87 80.5
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 7.4e-33 143.7 83 83.1
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 9.7e-33 143.3 91 80.2
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 9.7e-33 143.3 91 80.2
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 9.7e-33 143.3 91 80.2
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 9.7e-33 143.3 91 78.0
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 9.7e-33 143.3 94 79.8
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 1.3e-32 142.9 84 82.1
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 1.3e-32 142.9 94 79.8
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 1.7e-32 142.5 97 76.3
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 1.7e-32 142.5 89 78.7
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 2.2e-32 142.1 82 84.1
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 2.2e-32 142.1 94 74.5
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 3.7e-32 141.4 107 72.0
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 1.1e-31 139.8 86 77.9
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 1.4e-31 139.4 91 76.9
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 2.4e-31 138.7 90 75.6
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 2.4e-31 138.7 90 75.6
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 2.4e-31 138.7 99 72.7
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 3.1e-31 138.3 82 81.7
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 3.1e-31 138.3 90 75.6
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 3.1e-31 138.3 90 75.6
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 3.1e-31 138.3 90 75.6
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 3.1e-31 138.3 90 75.6
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 4.1e-31 137.9 110 70.0
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 4.1e-31 137.9 83 77.1
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 4.1e-31 137.9 81 77.8
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 5.3e-31 137.5 90 76.7
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 5.3e-31 137.5 97 76.3
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 1.6e-30 136.0 77 83.1
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 2.0e-30 135.6 119 63.0
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 2.6e-30 135.2 78 88.5
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 4.5e-30 134.4 87 77.0
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 1.0e-29 133.3 81 80.2
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 1.0e-29 133.3 74 85.1
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 2.2e-29 132.1 84 78.6
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 3.8e-29 131.3 113 63.7
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 1.9e-28 129.0 94 68.1
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 9.4e-28 126.7 76 76.3
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 1.2e-27 126.3 79 81.0
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 8.0e-27 123.6 75 85.3
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 1.0e-26 123.2 81 81.5
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 1.8e-26 122.5 93 66.7
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 4.0e-26 121.3 81 76.5
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 5.2e-26 120.9 82 74.4
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 1.5e-25 119.4 84 77.4
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 2.0e-25 119.0 80 78.8
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.6e-25 118.6 81 75.3
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 3.3e-25 118.2 66 84.8
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 1.7e-24 115.9 93 63.4
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 6.3e-24 114.0 77 74.0
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 1.8e-23 112.5 64 84.4
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 2.0e-22 109.0 95 67.4
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 2.7e-22 108.6 84 66.7
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 4.2e-20 101.3 76 69.7
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 9.8e-17 90.1 85 58.8
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 6.3e-16 87.4 66 69.7
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 1.8e-15 85.9 47 85.1
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 5.9e-14 80.9 70 54.3
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 1.0e-13 80.1 90 47.8
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 2.3e-13 79.0 60 65.0
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 1.8e-10 69.3 52 65.4
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 2.3e-10 68.9 49 65.3
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 6.8e-10 67.4 48 66.7
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 6.8e-10 67.4 48 66.7
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 6.8e-10 67.4 48 66.7


User provided reference genes

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