Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 4.2e-74 281.2 135 100.0
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 5.4e-37 157.9 88 81.8
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 9.2e-37 157.1 85 85.9
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 1.6e-36 156.4 115 70.4
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 4.6e-36 154.8 86 83.7
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 6.0e-36 154.5 88 83.0
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 7.8e-36 154.1 88 83.0
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 1.0e-35 153.7 88 84.1
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 1.3e-35 153.3 88 81.8
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 1.7e-35 152.9 85 82.4
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 2.3e-35 152.5 88 80.7
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 5.1e-35 151.4 85 81.2
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 8.6e-35 150.6 86 82.6
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 8.6e-35 150.6 86 82.6
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 1.1e-34 150.2 85 81.2
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 1.1e-34 150.2 85 80.0
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 1.5e-34 149.8 85 80.0
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 2.5e-34 149.1 85 80.0
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 3.3e-34 148.7 85 80.0
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 3.3e-34 148.7 86 79.1
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 3.3e-34 148.7 85 81.2
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 3.3e-34 148.7 85 81.2
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 4.3e-34 148.3 85 81.2
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 5.6e-34 147.9 85 80.0
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 5.6e-34 147.9 85 80.0
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 5.6e-34 147.9 85 78.8
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 5.6e-34 147.9 86 80.2
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 7.3e-34 147.5 85 78.8
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 7.3e-34 147.5 88 78.4
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 1.2e-33 146.7 85 82.4
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 1.2e-33 146.7 85 78.8
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 1.6e-33 146.4 85 80.0
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 1.6e-33 146.4 85 77.6
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 2.8e-33 145.6 85 77.6
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 4.7e-33 144.8 84 76.2
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 4.7e-33 144.8 85 78.8
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 6.2e-33 144.4 107 68.2
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 8.1e-33 144.1 88 77.3
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 8.1e-33 144.1 85 78.8
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 1.8e-32 142.9 85 76.5
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 2.4e-32 142.5 87 77.0
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 6.9e-32 141.0 85 75.3
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 6.9e-32 141.0 86 76.7
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 6.9e-32 141.0 85 75.3
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 8.9e-32 140.6 85 74.1
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 1.2e-31 140.2 88 75.0
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 2.0e-31 139.4 88 72.7
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 2.6e-31 139.0 85 74.1
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 4.4e-31 138.3 85 78.8
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 5.8e-31 137.9 85 76.5
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 7.6e-31 137.5 85 74.1
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 9.9e-31 137.1 84 75.0
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 9.9e-31 137.1 86 74.4
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 1.3e-30 136.7 85 72.9
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 1.3e-30 136.7 85 72.9
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 1.7e-30 136.3 88 72.7
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 1.7e-30 136.3 82 76.8
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 2.2e-30 136.0 88 69.3
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 2.2e-30 136.0 84 72.6
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 3.8e-30 135.2 88 72.7
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 3.8e-30 135.2 84 72.6
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 1.1e-29 133.7 85 76.5
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 1.1e-29 133.7 83 73.5
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 1.9e-29 132.9 85 75.3
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 1.9e-29 132.9 85 71.8
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 2.4e-29 132.5 85 75.3
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 2.4e-29 132.5 85 75.3
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 2.4e-29 132.5 85 69.4
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 4.2e-29 131.7 85 75.3
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 4.2e-29 131.7 85 75.3
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 4.2e-29 131.7 85 75.3
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 5.4e-29 131.3 88 65.9
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 9.3e-29 130.6 85 75.3
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 9.3e-29 130.6 90 72.2
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 9.3e-29 130.6 86 69.8
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 2.1e-28 129.4 85 74.1
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 2.1e-28 129.4 85 74.1
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 3.5e-28 128.6 84 73.8
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 3.5e-28 128.6 86 72.1
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 4.6e-28 128.3 86 75.6
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 4.6e-28 128.3 86 75.6
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 4.6e-28 128.3 86 75.6
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 4.6e-28 128.3 86 75.6
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 4.6e-28 128.3 86 75.6
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 6.0e-28 127.9 116 62.1
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 7.8e-28 127.5 85 70.6
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 7.8e-28 127.5 85 69.4
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 1.3e-27 126.7 84 69.0
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 5.1e-27 124.8 85 71.8
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 1.6e-25 119.8 85 62.4
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 8.1e-25 117.5 84 61.9
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 1.2e-23 113.6 85 60.0
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 1.1e-21 107.1 69 73.9
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 9.3e-21 104.0 72 68.1
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 1.6e-20 103.2 65 78.5
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 2.1e-20 102.8 64 75.0
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 3.5e-20 102.1 110 46.4
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 5.1e-19 98.2 81 53.1
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 9.6e-18 94.0 57 84.2
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 3.6e-17 92.0 86 48.8
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 2.4e-16 89.4 94 46.8
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 3.1e-16 89.0 49 83.7
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 6.9e-16 87.8 103 47.6
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 2.0e-15 86.3 100 57.0
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 2.0e-15 86.3 54 70.4
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 9.9e-15 84.0 100 55.0
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 8.4e-14 80.9 54 68.5
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 5.5e-13 78.2 49 77.6
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 5.5e-13 78.2 46 78.3
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 7.9e-12 74.3 99 43.4
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 6.7e-11 71.2 45 75.6
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 2.5e-10 69.3 54 59.3
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 2.5e-10 69.3 35 88.6
TPR.G38152 Trifolium pratense HOM05D006215 ORTHO05D007719 9.6e-10 67.4 43 67.4
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 1.6e-09 66.6 35 80.0
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 1.4e-08 63.5 108 34.3
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 5.8e-07 58.2 35 71.4


User provided reference genes

Program Settings