Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03685 Eucalyptus grandis HOM05D001235 ORTHO05D001610 3.2e-37 157.9 80 100.0
Eucgr.F03686 Eucalyptus grandis HOM05D001235 ORTHO05D001610 3.4e-31 137.9 75 90.7
Eucgr.H04198 Eucalyptus grandis HOM05D001235 ORTHO05D001610 1.1e-08 63.2 66 47.0
Ciclev10006872m.g Citrus clementina HOM05D001235 ORTHO05D001610 2.4e-08 62.0 80 37.5
Cfa017723 Carpinus fangiana HOM05D001235 ORTHO05D001610 7.0e-08 60.5 74 43.2
Cfa002520 Carpinus fangiana HOM05D001235 ORTHO05D001610 9.1e-08 60.1 74 43.2
Aqoxy4G01016 Aquilegia oxysepala HOM05D001235 ORTHO05D001610 1.6e-07 59.3 73 43.8
Haze_24743 Corylus avellana HOM05D001235 ORTHO05D001610 1.6e-07 59.3 74 43.2
Eucgr.H00820 Eucalyptus grandis HOM05D001235 ORTHO05D001610 1.6e-07 59.3 77 41.6
Sabra03G0130000 Salix brachista HOM05D001235 ORTHO05D001610 2.7e-07 58.5 75 41.3
Ciclev10006814m.g Citrus clementina HOM05D001235 ORTHO05D001610 3.5e-07 58.2 78 35.9
Eucgr.B02165 Eucalyptus grandis HOM05D001235 ORTHO05D001610 3.5e-07 58.2 78 37.2
Potri.003G172750 Populus trichocarpa HOM05D001235 ORTHO05D001610 3.5e-07 58.2 75 44.0
Potri.003G177400 Populus trichocarpa HOM05D001235 ORTHO05D001610 4.5e-07 57.8 75 41.3
Haze_24744 Corylus avellana HOM05D001235 ORTHO05D001610 5.9e-07 57.4 74 41.9
Potri.003G177300 Populus trichocarpa HOM05D001235 ORTHO05D001610 5.9e-07 57.4 77 39.0
Migut.M01873 Erythranthe guttata HOM05D001235 ORTHO05D001610 7.7e-07 57.0 76 36.8
GSVIVG01028495001 Vitis vinifera HOM05D001235 ORTHO05D001610 7.7e-07 57.0 73 38.4
Sabra15G0069700 Salix brachista HOM05D002089 ORTHO05D001610 1.0e-06 56.6 75 40.0
Duzib138G1895 Durio zibethinus HOM05D001235 ORTHO05D001610 1.3e-06 56.2 80 38.8
Eucgr.B02166 Eucalyptus grandis HOM05D001235 ORTHO05D001610 1.3e-06 56.2 79 35.4
Thhalv10005298m.g Eutrema salsugineum HOM05D001235 ORTHO05D001610 1.3e-06 56.2 77 39.0
Eucgr.H00822 Eucalyptus grandis HOM05D001235 ORTHO05D001610 1.7e-06 55.8 75 40.0
Glyma.03G170200 Glycine max HOM05D001235 ORTHO05D001610 1.7e-06 55.8 78 38.5
Potri.001G051000 Populus trichocarpa HOM05D001235 ORTHO05D001610 1.7e-06 55.8 80 36.2
CiPaw.03G153300 Carya illinoinensis HOM05D001235 ORTHO05D001610 2.2e-06 55.5 77 40.3
Ciclev10024122m.g Citrus clementina HOM05D001235 ORTHO05D001610 2.2e-06 55.5 80 38.8
Pp3c1_32730 Physcomitrium patens HOM05D000372 ORTHO05D001610 2.9e-06 55.1 79 38.0
PGR083G1081 Punica granatum HOM05D001235 ORTHO05D001610 2.9e-06 55.1 76 39.5
Aa31LG11G10120 Aethionema arabicum HOM05D001235 ORTHO05D001610 3.8e-06 54.7 77 36.4
BcaB04g19732 Brassica carinata HOM05D001235 ORTHO05D001610 3.8e-06 54.7 77 39.0
BcaB07g29957 Brassica carinata HOM05D001235 ORTHO05D001610 3.8e-06 54.7 77 39.0
BcaC04g23619 Brassica carinata HOM05D001235 ORTHO05D005684 3.8e-06 54.7 77 39.0
A09p05820 Brassica napus HOM05D001235 ORTHO05D001610 3.8e-06 54.7 77 39.0
BolC9t53562H Brassica oleracea HOM05D001235 ORTHO05D001610 3.8e-06 54.7 77 39.0
Thecc.01G236400 Theobroma cacao HOM05D001235 ORTHO05D001610 3.8e-06 54.7 77 41.6
Aqoxy5G00614 Aquilegia oxysepala HOM05D001235 ORTHO05D001610 5.0e-06 54.3 78 38.5
BraA09t36223Z Brassica rapa HOM05D001235 ORTHO05D001610 5.0e-06 54.3 77 39.0
CANSAT01G1725 Cannabis sativa HOM05D001235 ORTHO05D001610 5.0e-06 54.3 73 37.0
Duzib177G0932 Durio zibethinus HOM05D001235 ORTHO05D001610 5.0e-06 54.3 80 36.2
Potri.003G172800 Populus trichocarpa HOM05D026445 ORTHO05D001610 5.0e-06 54.3 78 38.5
RcHm_v2.0_Chr3g0448931 Rosa chinensis HOM05D001235 ORTHO05D001610 5.0e-06 54.3 76 35.5
BcaC03g17861 Brassica carinata HOM05D001235 ORTHO05D001610 6.5e-06 53.9 80 38.8
A02p39300 Brassica napus HOM05D001235 ORTHO05D005684 6.5e-06 53.9 80 38.8
C02p59020 Brassica napus HOM05D001235 ORTHO05D005684 6.5e-06 53.9 80 38.8
BolC2t11957H Brassica oleracea HOM05D001235 ORTHO05D005684 6.5e-06 53.9 80 38.8
BraA02t08895Z Brassica rapa HOM05D001235 ORTHO05D005684 6.5e-06 53.9 80 38.8
FvH4_6g01360 Fragaria vesca HOM05D001235 ORTHO05D001610 6.5e-06 53.9 76 36.8
FAN05G4843 Fragaria x ananassa HOM05D001235 ORTHO05D001610 6.5e-06 53.9 76 36.8
FAN09G3685 Fragaria x ananassa HOM05D001235 ORTHO05D001610 6.5e-06 53.9 76 36.8
FAN14G0714 Fragaria x ananassa HOM05D001235 ORTHO05D001610 6.5e-06 53.9 76 36.8
FAN14G5587 Fragaria x ananassa HOM05D001235 ORTHO05D001610 6.5e-06 53.9 76 36.8
Gohir.A08G105701 Gossypium hirsutum HOM05D001235 ORTHO05D001610 6.5e-06 53.9 76 36.8
Gohir.D08G116200 Gossypium hirsutum HOM05D001235 ORTHO05D001610 6.5e-06 53.9 76 36.8
Gorai.004G125100 Gossypium raimondii HOM05D001235 ORTHO05D001610 6.5e-06 53.9 76 36.8
Thecc.01G236500 Theobroma cacao HOM05D001235 ORTHO05D001610 6.5e-06 53.9 77 37.7
AagrBONN_evm.TU.Sc2ySwM_368.2058 Anthoceros agrestis HOM05D000372 ORTHO05D001610 8.5e-06 53.5 79 38.0
AL3G14250 Arabidopsis lyrata HOM05D001235 ORTHO05D001610 8.5e-06 53.5 76 40.8
CANSAT01G0638 Cannabis sativa HOM05D001235 ORTHO05D001610 8.5e-06 53.5 73 37.0
Lj1g0023506 Lotus japonicus HOM05D001235 ORTHO05D001610 8.5e-06 53.5 77 37.7
MBI08_g09974_MAGBIO Magnolia biondii HOM05D001235 ORTHO05D001610 8.5e-06 53.5 75 38.7


User provided reference genes

Program Settings