Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 1.7e-77 292.7 163 100.0
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 1.2e-54 216.9 163 71.2
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 1.2e-54 216.9 163 73.0
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 7.7e-54 214.2 162 72.2
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 7.7e-54 214.2 162 72.2
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 1.0e-53 213.8 162 72.2
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 2.2e-53 212.6 162 72.2
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 1.5e-52 209.9 162 69.1
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 1.9e-52 209.5 164 72.0
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 2.5e-52 209.1 141 78.0
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 2.5e-52 209.1 141 78.0
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 2.5e-52 209.1 141 78.0
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 3.2e-52 208.8 162 69.1
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 3.2e-52 208.8 160 70.6
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 4.2e-52 208.4 140 78.6
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 4.2e-52 208.4 140 78.6
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 4.2e-52 208.4 164 70.7
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 5.5e-52 208.0 163 68.7
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 7.2e-52 207.6 165 70.3
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 7.2e-52 207.6 160 68.8
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 9.4e-52 207.2 140 77.1
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 1.2e-51 206.8 163 68.1
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 1.6e-51 206.5 164 68.9
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 2.1e-51 206.1 142 78.2
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 2.1e-51 206.1 142 78.2
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 2.1e-51 206.1 163 68.1
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 2.7e-51 205.7 162 68.5
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 2.7e-51 205.7 141 76.6
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 2.7e-51 205.7 141 76.6
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 2.7e-51 205.7 141 76.6
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 2.7e-51 205.7 141 76.6
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 2.7e-51 205.7 163 70.6
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 2.7e-51 205.7 156 73.1
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 3.6e-51 205.3 141 76.6
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 3.6e-51 205.3 141 76.6
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 3.6e-51 205.3 160 68.1
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 3.6e-51 205.3 166 70.5
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 6.1e-51 204.5 163 67.5
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 1.0e-50 203.8 167 68.9
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 1.0e-50 203.8 167 68.9
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 1.0e-50 203.8 142 74.6
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 1.4e-50 203.4 165 69.7
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 1.4e-50 203.4 137 78.1
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 2.3e-50 202.6 164 68.3
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 2.3e-50 202.6 167 68.3
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 3.0e-50 202.2 166 68.7
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 3.0e-50 202.2 161 70.2
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 3.0e-50 202.2 161 69.6
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 3.9e-50 201.8 153 71.2
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 3.9e-50 201.8 148 72.3
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 6.7e-50 201.1 165 68.5
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 8.8e-50 200.7 165 68.5
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 8.8e-50 200.7 140 76.4
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 2.0e-49 199.5 166 70.5
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 3.3e-49 198.7 161 70.2
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 4.4e-49 198.4 166 68.1
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 4.4e-49 198.4 151 70.2
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 5.7e-49 198.0 142 72.5
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 7.4e-49 197.6 166 68.1
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 7.4e-49 197.6 165 68.5
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 9.7e-49 197.2 141 74.5
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 1.3e-48 196.8 139 74.8
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 1.3e-48 196.8 135 75.6
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 1.7e-48 196.4 137 74.5
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 2.8e-48 195.7 139 74.8
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 3.7e-48 195.3 139 74.8
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 3.7e-48 195.3 139 74.1
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 4.8e-48 194.9 149 69.8
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 4.8e-48 194.9 149 69.8
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 4.8e-48 194.9 134 73.9
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 6.3e-48 194.5 142 73.2
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 6.3e-48 194.5 164 65.9
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 1.4e-47 193.4 141 73.8
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 1.8e-47 193.0 165 63.6
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 2.4e-47 192.6 164 65.2
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 3.1e-47 192.2 156 68.6
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 3.1e-47 192.2 150 69.3
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 9.1e-47 190.7 166 64.5
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 1.2e-46 190.3 140 71.4
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.2e-46 190.3 144 70.1
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 1.2e-46 190.3 164 65.2
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 1.2e-46 190.3 151 68.9
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.0e-46 189.5 144 70.1
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 2.6e-46 189.1 172 66.3
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 3.5e-46 188.7 106 86.8
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 4.5e-46 188.3 100 92.0
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 4.5e-46 188.3 137 71.5
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 5.9e-46 188.0 140 72.9
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 5.9e-46 188.0 140 72.9
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 5.9e-46 188.0 167 62.9
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 1.0e-45 187.2 138 72.5
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 1.7e-45 186.4 138 73.2
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 1.7e-45 186.4 100 90.0
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.2e-45 186.0 140 72.1
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 3.8e-45 185.3 146 69.9
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 3.8e-45 185.3 139 71.2
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 3.8e-45 185.3 141 68.1
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 6.5e-45 184.5 107 86.0
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 6.5e-45 184.5 135 72.6
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 8.5e-45 184.1 138 71.7
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 8.5e-45 184.1 103 87.4
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 1.1e-44 183.7 147 70.1
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 1.5e-44 183.3 138 73.2
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 1.5e-44 183.3 142 69.7
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 4.2e-44 181.8 138 73.2
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 7.2e-44 181.0 154 65.6
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 2.1e-43 179.5 157 63.7
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 6.1e-43 177.9 144 66.0
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 8.0e-43 177.6 143 66.4
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 1.4e-42 176.8 161 64.6
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 2.7e-38 162.5 139 64.0
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 4.5e-38 161.8 167 58.1
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 1.7e-37 159.8 79 94.9
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 8.0e-35 151.0 132 64.4
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 5.2e-34 148.3 163 55.2
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 8.8e-34 147.5 105 68.6
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 2.0e-30 136.3 93 72.0
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 1.0e-29 134.0 166 43.4
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 1.7e-29 133.3 164 46.3
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 9.5e-28 127.5 93 63.4
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 2.8e-27 125.9 162 46.3
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 2.8e-27 125.9 164 51.2
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 6.3e-24 114.8 72 77.8
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 3.1e-18 95.9 91 52.7
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 6.8e-18 94.7 106 50.0
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 2.6e-17 92.8 52 88.5
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 5.8e-17 91.7 50 90.0
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 5.8e-17 91.7 50 90.0
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 3.7e-16 89.0 100 50.0
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 1.2e-11 73.9 123 34.1


User provided reference genes

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