Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 0.0e+00 1376.3 821 100.0
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 9.2e-180 634.8 425 85.6
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.0e-178 631.3 405 88.6
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 1.2e-171 607.8 860 48.0
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 8.1e-168 595.1 800 50.6
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 2.6e-166 590.1 825 52.1
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 2.9e-165 586.6 840 51.0
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 3.5e-163 579.7 857 50.4
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 1.6e-155 554.3 845 50.9
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 3.6e-152 543.1 838 45.8
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 1.7e-146 524.2 830 45.3
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 6.2e-144 515.8 821 48.0
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 1.3e-141 508.1 838 43.1
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 1.7e-141 507.7 812 46.9
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 1.4e-140 504.6 872 45.1
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 1.6e-139 501.1 822 43.1
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.0e-138 498.4 830 46.0
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 2.5e-137 493.8 816 42.8
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 2.1e-136 490.7 820 42.3
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 3.7e-136 490.0 830 47.5
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 6.2e-136 489.2 812 43.6
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 1.1e-135 488.4 836 46.7
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.4e-135 488.0 818 46.5
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 3.1e-135 486.9 838 42.5
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 3.1e-135 486.9 821 48.2
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 5.3e-135 486.1 828 44.0
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 1.5e-134 484.6 829 43.1
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 2.0e-134 484.2 547 52.8
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 1.0e-133 481.9 815 45.4
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 1.0e-133 481.9 832 42.5
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 3.8e-133 479.9 840 43.3
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 1.1e-132 478.4 826 46.4
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 1.4e-132 478.0 822 45.7
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 2.5e-132 477.2 815 45.9
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 1.2e-131 474.9 837 42.7
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 1.6e-131 474.6 804 42.5
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 2.1e-131 474.2 839 44.5
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 2.7e-131 473.8 819 42.4
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 1.8e-130 471.1 814 41.3
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 1.8e-130 471.1 574 50.0
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 9.6e-129 465.3 827 43.5
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 2.6e-126 457.2 546 54.8
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 3.4e-126 456.8 817 42.2
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 1.3e-122 444.9 818 44.3
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 1.9e-121 441.0 810 40.2
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 2.5e-121 440.7 818 43.9
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 1.8e-119 434.5 815 41.2
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 4.1e-119 433.3 826 43.0
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 2.6e-118 430.6 819 38.9
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 5.9e-118 429.5 855 42.8
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 7.7e-118 429.1 819 40.9
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 1.3e-117 428.3 834 42.6
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 1.7e-117 427.9 581 46.1
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 1.4e-116 424.9 637 47.9
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 1.0e-114 418.7 819 41.3
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 5.7e-113 412.9 824 40.7
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 4.8e-112 409.8 816 39.1
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 8.2e-112 409.1 816 38.6
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 1.4e-111 408.3 846 38.2
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 2.4e-111 407.5 813 43.9
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 4.1e-111 406.8 556 45.1
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 3.4e-110 403.7 822 41.0
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 3.4e-110 403.7 535 45.4
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 1.0e-109 402.1 831 38.7
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 1.0e-109 402.1 831 38.7
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 2.2e-109 401.0 826 40.2
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 6.5e-109 399.4 826 40.0
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 3.2e-108 397.1 814 36.5
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 8.8e-106 389.0 816 39.0
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 1.1e-105 388.7 821 42.0
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 1.1e-103 382.1 817 40.9
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 5.9e-102 376.3 723 42.0
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 1.5e-100 371.7 515 45.2
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 2.5e-100 370.9 500 46.0
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 1.0e-98 365.5 817 36.4
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 2.2e-96 357.8 827 38.6
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 8.0e-91 339.3 626 40.6
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 9.8e-89 332.4 629 40.4
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 8.8e-82 309.3 835 37.4
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 1.1e-79 302.4 796 33.9
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 4.9e-72 276.9 444 41.9
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 4.1e-71 273.9 505 45.0
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 2.5e-68 264.6 826 34.7
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 2.2e-64 251.5 386 44.3
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 8.3e-64 249.6 823 30.3
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 4.7e-59 233.8 684 31.7
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 6.8e-58 229.9 267 50.9
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 7.3e-52 209.9 815 31.5
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 2.2e-48 198.4 287 45.3
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 2.6e-33 148.3 722 25.6
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 3.8e-32 144.4 872 25.1
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.3e-29 135.2 370 36.2
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 9.0e-26 123.2 184 42.4
HPP92_026843 Vanilla planifolia HOM05D007213 ORTHO05D009165 1.3e-24 119.4 406 32.8
Oeu000728.1 Olea europaea HOM05D007213 ORTHO05D009165 1.7e-16 92.4 108 51.9
HPP92_019587 Vanilla planifolia HOM05D007213 ORTHO05D009165 7.1e-15 87.0 135 38.5
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.3e-13 82.8 166 39.2
ATR0605G187 Amborella trichopoda HOM05D007213 ORTHO05D009165 3.0e-13 81.6 333 30.9
Actinidia37290 Actinidia chinensis HOM05D007213 ORTHO05D009165 4.8e-11 74.3 113 44.2
Dinv19952 Davidia involucrata HOM05D007213 ORTHO05D009165 2.6e-09 68.6 70 54.3
Actinidia08360 Actinidia chinensis HOM05D007213 ORTHO05D009165 3.8e-08 64.7 78 51.3
ECA238G3550 Erigeron canadensis HOM05D008258 ORTHO05D003386 5.0e-08 64.3 126 38.1
Lsat_1_v5_gn_4_123560 Lactuca sativa HOM05D007213 ORTHO05D009165 1.1e-07 63.2 88 45.5
Lsat_1_v5_gn_2_25501 Lactuca sativa HOM05D007213 ORTHO05D009165 1.4e-07 62.8 88 45.5
Lsat_1_v5_gn_4_171321 Lactuca sativa HOM05D007213 ORTHO05D009165 1.2e-06 59.7 88 42.0
HPP92_019588 Vanilla planifolia HOM05D007213 ORTHO05D009165 2.7e-06 58.5 146 41.1


User provided reference genes

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