Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 4.5e-195 684.5 368 100.0
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 2.6e-105 386.3 357 58.0
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 1.3e-101 374.0 356 57.0
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 3.2e-100 369.4 354 58.2
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 3.2e-100 369.4 357 57.1
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 7.2e-100 368.2 358 56.1
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 1.2e-99 367.5 357 57.7
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 2.1e-99 366.7 342 59.6
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 8.0e-99 364.8 355 56.1
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 1.1e-97 360.9 360 56.4
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 1.5e-97 360.5 363 56.2
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 2.6e-97 359.8 351 56.1
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 2.6e-97 359.8 351 55.8
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 3.3e-97 359.4 334 58.4
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 5.7e-97 358.6 328 58.2
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 7.4e-97 358.2 359 54.9
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 2.2e-96 356.7 357 56.6
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 4.8e-96 355.5 367 55.0
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 8.2e-96 354.8 276 65.6
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 7.0e-95 351.7 353 54.1
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 1.2e-94 350.9 364 55.2
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 1.2e-94 350.9 340 55.9
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 3.5e-94 349.4 356 54.5
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 1.0e-93 347.8 334 56.6
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 6.5e-93 345.1 264 67.8
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 8.5e-93 344.7 331 56.5
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 1.9e-92 343.6 270 65.6
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 5.5e-92 342.0 340 55.9
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 1.2e-91 340.9 290 60.3
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 2.1e-91 340.1 387 51.4
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 3.6e-91 339.3 363 53.4
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 1.0e-90 337.8 360 54.4
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 6.7e-90 335.1 410 49.5
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 5.7e-89 332.0 258 67.1
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 2.2e-88 330.1 343 53.4
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 2.2e-88 330.1 279 62.0
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 3.7e-88 329.3 329 55.9
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 6.3e-88 328.6 305 58.4
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 8.2e-88 328.2 321 56.4
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 8.2e-88 328.2 329 55.9
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.8e-87 327.0 293 59.4
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 5.3e-87 325.5 300 57.7
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 7.0e-87 325.1 333 54.1
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 9.1e-87 324.7 338 55.3
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 1.2e-86 324.3 332 52.7
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 3.5e-86 322.8 278 60.1
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 3.5e-86 322.8 243 66.3
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 5.9e-86 322.0 265 61.9
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 7.7e-86 321.6 315 57.8
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 7.7e-86 321.6 343 52.8
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 7.7e-86 321.6 320 55.9
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.0e-85 321.2 332 54.5
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 1.3e-85 320.9 312 56.7
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 1.7e-85 320.5 306 57.2
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 2.2e-85 320.1 295 57.6
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 3.8e-85 319.3 247 65.6
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 3.8e-85 319.3 300 57.0
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 1.1e-84 317.8 315 56.2
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.5e-84 317.4 329 53.8
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 3.2e-84 316.2 278 60.1
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 4.2e-84 315.8 260 61.2
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 5.5e-84 315.5 305 55.7
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 9.4e-84 314.7 392 48.5
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 1.6e-83 313.9 301 56.1
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 2.1e-83 313.5 348 50.6
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 6.1e-83 312.0 325 51.4
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 8.0e-83 311.6 300 56.7
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 1.4e-82 310.8 324 54.3
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 2.3e-82 310.1 315 52.7
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 4.0e-82 309.3 308 53.2
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 4.0e-82 309.3 333 51.7
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 5.2e-82 308.9 333 52.0
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 5.2e-82 308.9 374 50.0
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 6.8e-82 308.5 316 51.6
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 6.8e-82 308.5 347 49.0
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 6.8e-82 308.5 347 49.0
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 1.2e-81 307.8 320 52.8
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 1.5e-81 307.4 290 55.9
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 1.5e-81 307.4 315 51.7
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 7.5e-81 305.1 331 52.9
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 9.8e-81 304.7 317 53.0
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 9.8e-81 304.7 333 50.5
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 1.7e-80 303.9 348 48.9
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 2.8e-80 303.1 307 53.1
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 3.7e-80 302.8 296 57.8
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 4.8e-80 302.4 289 56.1
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 1.4e-79 300.8 359 47.6
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 1.4e-79 300.8 262 59.9
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 2.4e-79 300.1 280 57.1
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 9.1e-79 298.1 359 47.9
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 9.1e-79 298.1 322 51.2
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 1.2e-78 297.7 320 51.9
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 1.6e-78 297.4 273 57.9
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 4.5e-78 295.8 183 77.0
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 1.7e-77 293.9 328 51.8
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 6.6e-77 292.0 250 61.2
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 8.6e-77 291.6 279 57.7
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 1.2e-75 287.7 233 63.5
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 2.8e-75 286.6 240 60.4
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 9.8e-73 278.1 265 55.5
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 9.8e-73 278.1 242 58.3
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 4.9e-72 275.8 190 69.5
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 3.1e-71 273.1 320 50.0
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 2.0e-70 270.4 241 56.8
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 5.9e-70 268.9 197 70.6
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 1.8e-66 257.3 173 72.8
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 2.7e-62 243.4 260 49.6
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 6.0e-62 242.3 260 50.0
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 1.9e-60 237.3 150 77.3
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 3.3e-60 236.5 264 47.7
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 4.3e-60 236.1 197 55.8
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 8.1e-51 205.3 121 79.3
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 5.2e-50 202.6 174 56.3
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 1.5e-49 201.1 210 50.5
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 1.3e-48 198.0 166 56.6
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 2.4e-47 193.7 103 87.4
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 1.2e-46 191.4 226 46.5
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 2.1e-46 190.7 168 54.8
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 1.6e-30 137.9 69 89.9
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 2.1e-30 137.5 79 78.5
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 4.8e-19 99.8 64 75.0
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 1.6e-14 84.7 58 65.5
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 1.1e-07 62.0 43 67.4
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 2.1e-06 57.8 136 29.4


User provided reference genes

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