Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 9.6e-253 876.3 434 100.0
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 4.2e-147 525.4 419 63.5
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 4.3e-144 515.4 439 61.3
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 9.6e-144 514.2 349 69.6
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 2.8e-143 512.7 349 69.9
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 2.4e-142 509.6 348 67.8
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 3.1e-142 509.2 350 68.9
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 1.5e-141 506.9 438 60.0
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 6.4e-140 501.5 373 65.1
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 1.4e-139 500.4 362 66.3
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 4.2e-139 498.8 429 59.9
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 4.2e-139 498.8 362 66.0
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 5.4e-139 498.4 347 67.7
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 7.1e-139 498.0 439 59.5
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 7.1e-139 498.0 446 57.4
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 1.6e-138 496.9 368 64.1
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 4.6e-138 495.4 362 65.5
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 1.0e-137 494.2 347 66.6
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 2.3e-137 493.0 408 60.5
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 2.3e-137 493.0 368 64.4
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 5.1e-137 491.9 422 59.7
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 5.1e-137 491.9 422 59.7
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 5.1e-137 491.9 422 59.7
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 8.7e-137 491.1 369 64.2
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 1.1e-136 490.7 370 63.2
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 1.1e-136 490.7 449 57.2
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.1e-136 490.7 431 57.5
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 1.9e-136 490.0 347 65.4
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 2.5e-136 489.6 348 65.8
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 2.5e-136 489.6 350 65.7
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 3.3e-136 489.2 430 59.5
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 3.3e-136 489.2 409 59.9
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 5.6e-136 488.4 416 60.3
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 5.6e-136 488.4 416 60.3
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 5.6e-136 488.4 416 60.3
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 7.3e-136 488.0 348 64.9
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.3e-135 487.3 367 61.3
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 2.1e-135 486.5 372 63.7
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 2.1e-135 486.5 449 55.9
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 2.8e-135 486.1 425 58.1
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 3.6e-135 485.7 416 59.6
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 3.6e-135 485.7 358 64.0
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 4.8e-135 485.3 406 59.9
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 4.8e-135 485.3 422 58.8
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 6.2e-135 485.0 431 56.6
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 8.1e-135 484.6 437 56.3
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 8.1e-135 484.6 422 59.2
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 1.1e-134 484.2 408 59.6
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 2.4e-134 483.0 347 65.1
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 3.1e-134 482.6 423 58.9
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 4.0e-134 482.3 358 62.8
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 9.0e-134 481.1 414 58.7
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 1.5e-133 480.3 406 58.9
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.5e-133 480.3 363 62.5
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 2.0e-133 479.9 348 63.5
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 3.4e-133 479.2 350 65.4
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 3.4e-133 479.2 361 63.2
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 9.9e-133 477.6 349 63.6
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 1.7e-132 476.9 412 57.0
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 1.7e-132 476.9 412 58.5
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 2.2e-132 476.5 357 62.7
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 2.2e-132 476.5 407 58.7
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 3.8e-132 475.7 365 62.5
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 3.8e-132 475.7 344 62.8
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 3.8e-132 475.7 400 60.8
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 4.9e-132 475.3 436 55.7
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 8.4e-132 474.6 344 62.8
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 1.1e-131 474.2 384 61.2
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.9e-131 473.4 384 59.9
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 3.2e-131 472.6 347 63.4
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 4.2e-131 472.2 372 60.8
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 5.4e-131 471.9 418 57.2
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 7.1e-131 471.5 437 56.1
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 9.3e-131 471.1 427 56.2
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 9.3e-131 471.1 358 62.6
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 1.2e-130 470.7 347 62.5
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 2.1e-130 469.9 347 63.1
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 2.7e-130 469.5 356 60.7
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 3.5e-130 469.2 412 56.6
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.0e-129 467.6 423 56.3
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 1.0e-129 467.6 413 59.1
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 1.0e-129 467.6 409 58.4
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 1.0e-129 467.6 363 61.2
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.0e-129 467.6 366 60.4
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.3e-129 467.2 436 56.7
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 1.3e-129 467.2 366 60.1
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 1.8e-129 466.8 347 62.2
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.8e-129 466.8 412 57.5
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 5.1e-129 465.3 440 53.9
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 8.7e-129 464.5 429 54.5
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 8.7e-129 464.5 427 54.8
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 1.1e-128 464.2 359 61.0
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 1.5e-128 463.8 349 61.6
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 5.6e-128 461.8 425 54.4
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 7.4e-128 461.5 413 57.6
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 7.4e-128 461.5 345 61.2
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 9.6e-128 461.1 399 56.9
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 1.3e-127 460.7 412 57.3
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 4.8e-127 458.8 440 53.2
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 1.8e-126 456.8 420 55.0
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 1.8e-126 456.8 352 62.2
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 5.3e-126 455.3 405 55.6
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 1.2e-125 454.1 354 63.6
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.4e-125 452.6 440 53.0
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 2.2e-124 449.9 436 53.7
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 4.9e-124 448.7 341 61.6
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 8.4e-124 448.0 417 53.5
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 2.5e-123 446.4 355 59.7
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 4.2e-123 445.7 431 54.8
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 5.5e-123 445.3 350 59.7
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 1.2e-122 444.1 347 59.9
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 4.6e-122 442.2 362 57.7
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 3.0e-121 439.5 353 59.5
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 5.1e-121 438.7 411 54.0
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 5.1e-121 438.7 363 58.7
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.7e-119 432.6 403 52.9
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 8.2e-119 431.4 418 54.1
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 1.1e-118 431.0 355 57.7
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 6.9e-118 428.3 350 58.3
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 1.2e-117 427.6 331 60.4
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 1.5e-117 427.2 316 65.8
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 2.0e-117 426.8 361 57.1
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.6e-117 426.4 380 55.3
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 6.5e-116 421.8 351 57.8
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 1.9e-115 420.2 349 58.5
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 7.9e-114 414.8 416 52.6
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 1.3e-113 414.1 347 59.7
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.3e-113 414.1 399 53.4
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 3.9e-113 412.5 401 53.4
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.9e-112 410.2 399 53.1
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 4.3e-112 409.1 418 51.7
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 3.1e-110 402.9 359 55.4
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 3.1e-110 402.9 417 51.1
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 6.9e-110 401.7 357 57.1
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 3.4e-109 399.4 417 52.0
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.4e-107 394.0 348 56.9
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 5.5e-107 392.1 424 49.8
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 9.4e-107 391.3 309 59.2
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 1.4e-105 387.5 290 59.7
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.7e-100 370.5 346 51.4
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 3.6e-98 362.8 307 57.0
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 5.1e-97 359.0 342 50.0
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 6.7e-97 358.6 436 47.2
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 3.3e-96 356.3 251 64.5
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 4.4e-96 355.9 343 50.7
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 2.0e-93 347.1 346 49.7
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 2.0e-93 347.1 428 43.7
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.9e-91 340.5 252 61.5
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 8.0e-90 335.1 357 48.5
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 3.9e-89 332.8 346 48.6
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.1e-88 331.3 340 48.8
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.6e-88 330.1 341 46.9
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 3.3e-88 329.7 241 61.0
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 5.7e-88 328.9 240 63.3
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 5.7e-88 328.9 340 47.4
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 5.7e-88 328.9 391 48.8
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 1.4e-81 307.8 191 75.9
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.4e-81 307.8 348 46.6
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 2.8e-79 300.1 236 57.6
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.8e-78 297.4 342 45.9
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.3e-76 291.2 346 42.5
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 8.5e-76 288.5 299 48.2
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 2.3e-73 280.4 236 53.4
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 9.1e-70 268.5 348 41.7
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 9.1e-70 268.5 349 40.1
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 9.5e-67 258.5 347 40.3
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 9.5e-67 258.5 404 35.6
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.6e-66 256.5 348 38.8
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 6.1e-66 255.8 240 50.4
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 4.0e-57 226.5 374 36.4
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 8.4e-39 165.6 427 30.0
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.6e-37 161.4 149 57.0
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 2.3e-36 157.5 154 51.9
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 7.9e-21 105.9 112 45.5
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 1.9e-19 101.3 79 55.7
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 6.2e-18 96.3 85 48.2
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.5e-16 91.7 119 38.7
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.1e-14 85.5 98 41.8
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 3.9e-12 77.0 105 48.6
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 7.4e-11 72.8 126 38.1
ATR0555G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 4.0e-09 67.0 68 39.7
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.9e-06 58.2 36 72.2
Cre06.g260650 Chlamydomonas reinhardtii HOM05D003650 ORTHO05D004213 4.2e-06 57.0 220 28.6


User provided reference genes

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