Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03547 Eucalyptus grandis HOM05D008020 ORTHO05D010140 1.1e-36 156.0 74 100.0
TAR625G0930 Trochodendron aralioides HOM05D008020 ORTHO05D010140 2.7e-22 108.2 71 74.6
Nn6g31749 Nelumbo nucifera HOM05D008020 ORTHO05D010140 2.3e-21 105.1 73 68.5
Haze_22756 Corylus avellana HOM05D008020 ORTHO05D010140 3.9e-21 104.4 74 68.9
ECA232G3495 Erigeron canadensis HOM05D008020 ORTHO05D010140 3.9e-21 104.4 77 66.2
Actinidia29785 Actinidia chinensis HOM05D008020 ORTHO05D010140 5.1e-21 104.0 73 69.9
Rhsim06G0008300 Rhododendron simsii HOM05D008020 ORTHO05D010140 5.1e-21 104.0 74 67.6
TWI56G1414 Tripterygium wilfordii HOM05D008020 ORTHO05D010140 1.5e-20 102.4 74 67.6
PSO210G7351 Papaver somniferum HOM05D008020 ORTHO05D010140 1.9e-20 102.1 74 64.9
SalBow7G2452 Salvia bowleyana HOM05D008020 ORTHO05D010140 3.3e-20 101.3 71 70.4
ATR0106G002 Amborella trichopoda HOM05D008020 ORTHO05D010140 7.3e-20 100.1 75 66.7
COL.COLO4_00185 Corchorus olitorius HOM05D008020 ORTHO05D010140 9.6e-20 99.8 77 63.6
Cpa.g.sc26.209 Carica papaya HOM05D008020 ORTHO05D010140 1.3e-19 99.4 74 63.5
Oeu056212.1 Olea europaea HOM05D008020 ORTHO05D010140 1.3e-19 99.4 75 66.7
COL.COLO4_03997 Corchorus olitorius HOM05D008020 ORTHO05D010140 1.6e-19 99.0 77 63.6
Lsat_1_v5_gn_9_44980 Lactuca sativa HOM05D008020 ORTHO05D010140 1.6e-19 99.0 74 66.2
Gorai.002G118600 Gossypium raimondii HOM05D008020 ORTHO05D010140 2.8e-19 98.2 74 64.9
Gohir.A01G106700 Gossypium hirsutum HOM05D008020 ORTHO05D010140 3.6e-19 97.8 74 62.2
Glyma.06G019000 Glycine max HOM05D008020 ORTHO05D010140 6.2e-19 97.1 72 69.4
Gohir.D01G093200 Gossypium hirsutum HOM05D008020 ORTHO05D010140 8.1e-19 96.7 74 63.5
MD15G1003000 Malus domestica HOM05D008020 ORTHO05D010140 8.1e-19 96.7 72 69.4
Migut.C00948 Erythranthe guttata HOM05D008020 ORTHO05D010140 1.1e-18 96.3 74 63.5
Migut.C00952 Erythranthe guttata HOM05D008020 ORTHO05D010140 1.1e-18 96.3 74 63.5
ClCG11G018630 Citrullus lanatus HOM05D008020 ORTHO05D010140 1.4e-18 95.9 74 63.5
Glyma.04G018700 Glycine max HOM05D008020 ORTHO05D010140 4.0e-18 94.4 72 68.1
Thecc.08G057500 Theobroma cacao HOM05D008020 ORTHO05D010140 6.9e-18 93.6 74 63.5
unitig_0.g2104 Utricularia gibba HOM05D008020 ORTHO05D010140 6.9e-18 93.6 74 66.2
Cfa014061 Carpinus fangiana HOM05D008020 ORTHO05D010140 9.0e-18 93.2 71 66.2
HanXRQChr15g0492771 Helianthus annuus HOM05D008020 ORTHO05D010140 1.2e-17 92.8 75 64.0
Medtr3g115170 Medicago truncatula HOM05D008020 ORTHO05D010140 3.4e-17 91.3 75 62.7
Psat5g011800 Pisum sativum HOM05D008020 ORTHO05D010140 3.4e-17 91.3 72 65.3
Manes.05G135100 Manihot esculenta HOM05D008020 ORTHO05D010140 5.8e-17 90.5 75 62.7
CDE05G0785 Ceratophyllum demersum HOM05D008020 ORTHO05D010140 7.6e-17 90.1 74 64.9
VMungo1309G2936 Vigna mungo HOM05D008020 ORTHO05D010140 9.9e-17 89.7 74 63.5
FAN15G1770 Fragaria x ananassa HOM05D008020 ORTHO05D010140 1.3e-16 89.4 84 56.0
Os03g0133100 Oryza sativa ssp. japonica HOM05D008020 ORTHO05D010140 1.3e-16 89.4 74 62.2
Phvul.009G021900 Phaseolus vulgaris HOM05D008020 ORTHO05D010140 1.3e-16 89.4 75 61.3
FvH4_2g37570 Fragaria vesca HOM05D008020 ORTHO05D010140 1.7e-16 89.0 85 57.6
RcHm_v2.0_Chr6g0304161 Rosa chinensis HOM05D008020 ORTHO05D010140 2.2e-16 88.6 77 58.4
CARHR284890 Cardamine hirsuta HOM05D008020 ORTHO05D010140 2.9e-16 88.2 87 54.0
MELO3C017014.2 Cucumis melo HOM05D008020 ORTHO05D010140 2.9e-16 88.2 74 59.5
Sc26g0004630 Simmondsia chinensis HOM05D008020 ORTHO05D010140 3.8e-16 87.8 75 61.3
Carub.0008s0691 Capsella rubella HOM05D008020 ORTHO05D010140 4.9e-16 87.4 79 57.0
Lj1g0023017 Lotus japonicus HOM05D008020 ORTHO05D010140 4.9e-16 87.4 75 58.7
CsaV3_4G037160 Cucumis sativus L. HOM05D008020 ORTHO05D010140 1.1e-15 86.3 69 65.2
Duzib041G0109 Durio zibethinus HOM05D008020 ORTHO05D010140 1.1e-15 86.3 74 56.8
Zm00001eb402590 Zea mays HOM05D008020 ORTHO05D010140 1.1e-15 86.3 76 60.5
EL10Ac1g01981 Beta vulgaris HOM05D008020 ORTHO05D010140 1.9e-15 85.5 74 62.2
C03p28110 Brassica napus HOM05D008020 ORTHO05D010140 3.2e-15 84.7 88 51.1
arahy.Tifrunner.gnm1.ann1.IQ4KFY Arachis hypogaea HOM05D008020 ORTHO05D010140 5.4e-15 84.0 74 59.5
BcaC01g05309 Brassica carinata HOM05D008020 ORTHO05D010140 7.1e-15 83.6 88 48.9
BolC3t15181H Brassica oleracea HOM05D008020 ORTHO05D010140 7.1e-15 83.6 88 48.9
AT5G42290 Arabidopsis thaliana HOM05D008020 ORTHO05D010140 1.2e-14 82.8 86 51.2
SEGI_30631 Sequoiadendron giganteum HOM05D008020 ORTHO05D010140 1.6e-14 82.4 76 59.2
CSS0004036 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 2.1e-14 82.0 73 60.3
BcaB01g03440 Brassica carinata HOM05D008020 ORTHO05D010140 3.5e-14 81.3 88 47.7
Sp7g08310 Schrenkiella parvula HOM05D008020 ORTHO05D010140 3.5e-14 81.3 88 52.3
Thhalv10009649m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 1.0e-13 79.7 88 48.9
Atru.chr13.153 Acer truncatum HOM05D008020 ORTHO05D010140 1.8e-13 79.0 62 61.3
Ca_15441_v3 Cicer arietinum L. HOM05D008020 ORTHO05D010140 1.8e-13 79.0 73 60.3
Ah.00g000390 Amaranthus hybridus HOM05D008020 ORTHO05D010140 2.3e-13 78.6 71 63.4
Thhalv10028031m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 5.1e-13 77.4 88 47.7
Lalb_Chr11g0061691 Lupinus albus HOM05D008020 ORTHO05D010140 8.7e-13 76.6 73 56.2
AL8G19330 Arabidopsis lyrata HOM05D008020 ORTHO05D010140 3.3e-12 74.7 86 47.7
CSS0008844 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 5.6e-12 73.9 73 53.4
AUR62036888 Chenopodium quinoa HOM05D008020 ORTHO05D010140 4.8e-11 70.9 72 61.1
AUR62043558 Chenopodium quinoa HOM05D008020 ORTHO05D010140 4.8e-11 70.9 72 61.1
Aa31LG9G12400 Aethionema arabicum HOM05D008020 ORTHO05D010140 2.0e-09 65.5 74 48.6
AagrBONN_evm.TU.Sc2ySwM_368.1603 Anthoceros agrestis HOM05D008020 ORTHO05D010140 2.6e-09 65.1 74 54.1
Ciclev10003459m.g Citrus clementina HOM05D008020 ORTHO05D010140 6.5e-08 60.5 74 45.9
Pp3c20_23510 Physcomitrium patens HOM05D008020 ORTHO05D010140 7.9e-06 53.5 76 46.1


User provided reference genes

Program Settings