Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03471 Eucalyptus grandis HOM05D006936 ORTHO05D008273 2.4e-96 355.5 184 100.0
GSVIVG01037658001 Vitis vinifera HOM05D006936 ORTHO05D008273 3.9e-70 268.5 184 72.8
Gohir.D01G067300 Gossypium hirsutum HOM05D006936 ORTHO05D008273 1.1e-69 266.9 185 74.6
Gorai.002G089200 Gossypium raimondii HOM05D006936 ORTHO05D008273 5.6e-69 264.6 185 74.1
Thecc.07G035400 Theobroma cacao HOM05D006936 ORTHO05D008273 4.7e-68 261.5 185 74.1
Haze_09683 Corylus avellana HOM05D006936 ORTHO05D008273 6.2e-68 261.2 187 71.7
Ciclev10009642m.g Citrus clementina HOM05D006936 ORTHO05D008273 1.4e-67 260.0 185 75.7
Duzib213G0701 Durio zibethinus HOM05D006936 ORTHO05D008273 1.8e-67 259.6 185 73.5
CiPaw.11G190300 Carya illinoinensis HOM05D006936 ORTHO05D008273 4.0e-67 258.5 186 72.0
Gohir.A01G080100 Gossypium hirsutum HOM05D006936 ORTHO05D008273 5.2e-67 258.1 185 73.5
Cpa.g.sc12.300 Carica papaya HOM05D006936 ORTHO05D008273 3.4e-66 255.4 185 70.8
Hma1.2p1_0738F.1_g211120 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.9e-64 249.6 188 70.2
Hma1.2p1_2518F.1_g323766 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.9e-64 249.6 188 70.2
Prupe.4G214700 Prunus persica HOM05D006936 ORTHO05D008273 3.5e-63 245.4 185 67.6
Potri.003G122100 Populus trichocarpa HOM05D006936 ORTHO05D008273 6.0e-63 244.6 185 68.1
Aqoxy3G01790 Aquilegia oxysepala HOM05D006936 ORTHO05D008273 7.8e-63 244.2 195 68.7
ClCG10G005400 Citrullus lanatus HOM05D006936 ORTHO05D008273 1.7e-62 243.0 185 68.6
RcHm_v2.0_Chr5g0040171 Rosa chinensis HOM05D006936 ORTHO05D008273 5.1e-62 241.5 185 67.0
CsaV3_3G005130 Cucumis sativus L. HOM05D006936 ORTHO05D008273 8.7e-62 240.7 185 67.6
MD11G1216700 Malus domestica HOM05D006936 ORTHO05D008273 8.7e-62 240.7 185 67.0
BcaC07g38260 Brassica carinata HOM05D006936 ORTHO05D008273 1.5e-61 240.0 186 65.1
PGR031G2182 Punica granatum HOM05D006936 ORTHO05D008273 1.5e-61 240.0 184 67.4
BcaNung03571 Brassica carinata HOM05D006936 ORTHO05D008273 4.3e-61 238.4 186 65.1
CSS0049611 Camellia sinensis var. sinensis HOM05D006936 ORTHO05D008273 4.3e-61 238.4 187 67.4
Manes.03G129900 Manihot esculenta HOM05D006936 ORTHO05D008273 4.3e-61 238.4 185 67.6
TWI39G1260 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 4.3e-61 238.4 185 68.6
Carub.0007s1390 Capsella rubella HOM05D006936 ORTHO05D008273 2.1e-60 236.1 186 63.4
Glyma.08G317000 Glycine max HOM05D006936 ORTHO05D008273 3.6e-60 235.3 184 65.8
Glyma.18G095900 Glycine max HOM05D006936 ORTHO05D008273 3.6e-60 235.3 184 66.3
TWI38G2356 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 6.2e-60 234.6 185 67.6
TAR624G1327 Trochodendron aralioides HOM05D006936 ORTHO05D008273 1.1e-59 233.8 190 67.4
THA.LOC104813424 Tarenaya hassleriana HOM05D006936 ORTHO05D008273 1.4e-59 233.4 190 65.8
AL7G25870 Arabidopsis lyrata HOM05D006936 ORTHO05D008273 2.4e-59 232.6 186 64.0
Ca_19852_v3 Cicer arietinum L. HOM05D006936 ORTHO05D008273 2.4e-59 232.6 186 65.6
Sp7g24910 Schrenkiella parvula HOM05D006936 ORTHO05D008273 2.4e-59 232.6 186 63.4
Cc05_g13850 Coffea canephora HOM05D006936 ORTHO05D008273 4.0e-59 231.9 187 63.1
C08p10070 Brassica napus HOM05D006936 ORTHO05D008273 5.3e-59 231.5 186 64.5
BolC8t48685H Brassica oleracea HOM05D006936 ORTHO05D008273 5.3e-59 231.5 186 64.5
Lj6g0001928 Lotus japonicus HOM05D006936 ORTHO05D008273 5.3e-59 231.5 185 65.4
FvH4_3g22870 Fragaria vesca HOM05D006936 ORTHO05D008273 6.9e-59 231.1 185 65.9
FAN11G3489 Fragaria x ananassa HOM05D006936 ORTHO05D008273 6.9e-59 231.1 185 65.9
FAN21G0204 Fragaria x ananassa HOM05D006936 ORTHO05D008273 1.2e-58 230.3 185 65.9
QL08p009960 Quercus lobata HOM05D006936 ORTHO05D008273 4.4e-58 228.4 231 55.0
Lalb_Chr20g0113821 Lupinus albus HOM05D006936 ORTHO05D008273 7.6e-58 227.6 189 64.0
Medtr3g052260 Medicago truncatula HOM05D006936 ORTHO05D008273 9.9e-58 227.3 186 62.4
BcaB03g12517 Brassica carinata HOM05D006936 ORTHO05D008273 1.7e-57 226.5 188 63.3
HanXRQChr03g0076461 Helianthus annuus HOM05D006936 ORTHO05D008273 2.9e-57 225.7 188 64.9
AT4G26965 Arabidopsis thaliana HOM05D006936 ORTHO05D008273 3.8e-57 225.3 186 62.9
PSO832G3825 Papaver somniferum HOM05D006936 ORTHO05D008273 3.8e-57 225.3 190 63.7
Migut.H01824 Erythranthe guttata HOM05D006936 ORTHO05D008273 8.4e-57 224.2 185 65.4
Potri.001G109600 Populus trichocarpa HOM05D006936 ORTHO05D008273 8.4e-57 224.2 185 64.9
Phvul.006G044500 Phaseolus vulgaris HOM05D006936 ORTHO05D008273 1.9e-56 223.0 185 62.7
TPR.G33779 Trifolium pratense HOM05D006936 ORTHO05D008273 1.9e-56 223.0 186 61.8
VMungo0540G1312 Vigna mungo HOM05D006936 ORTHO05D008273 1.9e-56 223.0 185 62.7
DCAR_022566 Daucus carota HOM05D006936 ORTHO05D008273 3.2e-56 222.2 187 63.6
A01p18140 Brassica napus HOM05D006936 ORTHO05D008273 9.3e-56 220.7 189 60.3
PSO210G5704 Papaver somniferum HOM05D006936 ORTHO05D008273 1.2e-55 220.3 185 61.6
Psat5g178440 Pisum sativum HOM05D006936 ORTHO05D008273 2.1e-55 219.5 187 62.0
BolC1t02244H Brassica oleracea HOM05D006936 ORTHO05D008273 2.7e-55 219.2 200 57.5
C01p23100 Brassica napus HOM05D006936 ORTHO05D008273 3.5e-55 218.8 191 60.7
BraA01t01769Z Brassica rapa HOM05D006936 ORTHO05D008273 3.5e-55 218.8 197 58.4
MSTRG.12976 Avicennia marina HOM05D006936 ORTHO05D008273 4.6e-55 218.4 193 62.7
PGSC0003DMG401022215 Solanum tuberosum HOM05D006936 ORTHO05D008273 4.6e-55 218.4 184 60.9
SGA_v2.0_scaffold8G04322 Striga asiatica HOM05D006936 ORTHO05D008273 4.6e-55 218.4 187 63.6
Sopen07g032840 Solanum pennellii HOM05D006936 ORTHO05D008273 1.0e-54 217.2 184 60.3
Solyc07g064640.3 Solanum lycopersicum HOM05D006936 ORTHO05D008273 2.3e-54 216.1 184 59.8
ECA240G2843 Erigeron canadensis HOM05D006936 ORTHO05D008273 5.1e-54 214.9 172 66.3
Sc16g0005990 Simmondsia chinensis HOM05D006936 ORTHO05D008273 6.6e-54 214.5 189 61.9
EL10Ac4g07798 Beta vulgaris HOM05D006936 ORTHO05D008273 1.1e-53 213.8 188 59.0
HPP92_004131 Vanilla planifolia HOM05D006936 ORTHO05D008273 1.1e-53 213.8 184 58.7
Lsat_1_v5_gn_9_93840 Lactuca sativa HOM05D006936 ORTHO05D008273 2.1e-52 209.5 187 61.5
BraA08t34018Z Brassica rapa HOM05D006936 ORTHO05D008273 1.1e-51 207.2 225 53.3
FAN16G3045 Fragaria x ananassa HOM05D006936 ORTHO05D008273 1.8e-51 206.5 207 55.6
Cfa020336 Carpinus fangiana HOM05D000228 ORTHO05D001122 6.9e-51 204.5 134 74.6
Peaxi162Scf00235g00220 Petunia axillaris HOM05D006936 ORTHO05D008273 1.3e-49 200.3 214 54.7
arahy.Tifrunner.gnm1.ann1.HAV09U Arachis hypogaea HOM05D006936 ORTHO05D008273 1.7e-49 199.9 152 65.8
arahy.Tifrunner.gnm1.ann1.MX8M57 Arachis hypogaea HOM05D006936 ORTHO05D008273 1.7e-49 199.9 152 65.8
unitig_8.g4785 Utricularia gibba HOM05D006936 ORTHO05D008273 3.8e-49 198.7 186 60.2
Rhsim06G0217500 Rhododendron simsii HOM05D000228 ORTHO05D001122 4.9e-49 198.4 157 61.8
Thhalv10026517m.g Eutrema salsugineum HOM05D006936 ORTHO05D008273 1.4e-48 196.8 134 70.9
Oeu048401.1 Olea europaea HOM05D006936 ORTHO05D008273 2.4e-48 196.1 133 75.2
Nn1g03514 Nelumbo nucifera HOM05D006936 ORTHO05D008273 5.4e-48 194.9 192 59.4
CDE05G0574 Ceratophyllum demersum HOM05D006936 ORTHO05D008273 2.1e-47 193.0 132 71.2
Sabra01G0082900 Salix brachista HOM05D006936 ORTHO05D008273 2.7e-47 192.6 145 68.3
Nitab4.5_0007360g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 4.6e-47 191.8 134 72.4
CANSAT11G0469 Cannabis sativa HOM05D006936 ORTHO05D008273 1.3e-46 190.3 189 57.7
CAN.G337.138 Capsicum annuum HOM05D006936 ORTHO05D008273 1.3e-46 190.3 184 56.0
Nitab4.5_0003495g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 1.3e-46 190.3 133 67.7
A08p20640 Brassica napus HOM05D006936 ORTHO05D008273 1.8e-46 189.9 182 58.8
Sed0005355 Sechium edule HOM05D006936 ORTHO05D008273 1.8e-46 189.9 133 68.4
Hma1.2p1_0738F.1_g211130 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 3.9e-46 188.7 147 69.4
Os09g0500200 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 5.1e-46 188.3 191 56.0
Zm00001eb102230 Zea mays HOM05D006936 ORTHO05D008273 6.9e-43 177.9 188 54.8
ATR1094G005 Amborella trichopoda HOM05D006936 ORTHO05D008273 2.0e-42 176.4 150 61.3
CARHR234570 Cardamine hirsuta HOM05D006936 ORTHO05D008273 2.6e-42 176.0 151 60.9
MELO3C025377.2 Cucumis melo HOM05D006936 ORTHO05D008273 1.9e-40 169.9 205 50.2
Aa31LG5G12010 Aethionema arabicum HOM05D006936 ORTHO05D008273 2.5e-40 169.5 186 52.7
MBI02_g21871_MAGBIO Magnolia biondii HOM05D006936 ORTHO05D008273 2.1e-39 166.4 223 46.2
Dinv40761 Davidia involucrata HOM05D006936 ORTHO05D008273 7.9e-39 164.5 133 69.2
Atru.chr2.3444 Acer truncatum HOM05D006936 ORTHO05D008273 1.0e-38 164.1 99 76.8
vmacro02233 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 3.4e-34 149.1 93 72.0
Sabra18G0079500 Salix brachista HOM05D006936 ORTHO05D008273 7.6e-34 147.9 115 63.5
Hund23239 Selenicereus undatus HOM05D006936 ORTHO05D008273 1.4e-32 143.7 190 46.3
AUR62020430 Chenopodium quinoa HOM05D006936 ORTHO05D008273 2.5e-29 132.9 201 41.8
Hma1.2p1_0738F.1_g211110 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 7.4e-29 131.3 74 79.7
Actinidia24797 Actinidia chinensis HOM05D006936 ORTHO05D008273 3.7e-28 129.0 126 59.5
Hma1.2p1_0738F.1_g211140 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 9.0e-27 124.4 122 60.7
Hma1.2p1_2518F.1_g323762 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 9.0e-27 124.4 122 60.7
Os05g0538900 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 3.4e-26 122.5 86 68.6
arahy.Tifrunner.gnm1.ann1.XX62UZ Arachis hypogaea HOM05D006936 ORTHO05D008273 1.6e-23 113.6 112 62.5
Mapoly0093s0007 Marchantia polymorpha HOM05D006936 ORTHO05D008273 2.4e-19 99.8 200 33.5
Pp3c15_25830 Physcomitrium patens HOM05D006936 ORTHO05D008273 5.3e-19 98.6 169 40.2
Ah.06g185850 Amaranthus hybridus HOM05D006936 ORTHO05D008273 9.4e-16 87.8 114 50.0
AUR62015785 Chenopodium quinoa HOM05D000355 ORTHO05D000227 7.7e-10 68.2 110 42.7
SEGI_32271 Sequoiadendron giganteum HOM05D006301 ORTHO05D008273 8.5e-09 64.7 60 55.0
vmacro02234 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 2.3e-06 56.6 72 52.8
Ah.06g185860 Amaranthus hybridus HOM05D006936 ORTHO05D008273 5.2e-06 55.5 37 62.2
DCAR_000990 Daucus carota HOM05D006936 ORTHO05D008273 6.7e-06 55.1 66 54.5


User provided reference genes

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