Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03470 Eucalyptus grandis HOM05D005555 ORTHO05D006923 4.5e-242 840.9 437 100.0
GSVIVG01037655001 Vitis vinifera HOM05D005555 ORTHO05D006923 8.6e-209 730.3 439 87.7
TWI39G0347 Tripterygium wilfordii HOM05D005555 ORTHO05D006923 5.7e-205 717.6 436 86.0
Gorai.009G438400 Gossypium raimondii HOM05D005555 ORTHO05D006923 1.7e-204 716.1 425 86.6
Duzib268G1179 Durio zibethinus HOM05D005555 ORTHO05D006923 2.9e-201 705.3 429 85.3
Dinv22259 Davidia involucrata HOM05D005555 ORTHO05D006923 1.1e-200 703.4 439 85.0
QL08p010014 Quercus lobata HOM05D005555 ORTHO05D006923 1.5e-200 703.0 435 85.1
TAR627G0887 Trochodendron aralioides HOM05D005555 ORTHO05D006923 1.9e-200 702.6 439 84.5
CSS0046165 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 2.8e-199 698.7 439 83.6
Gohir.A04G016500 Gossypium hirsutum HOM05D005555 ORTHO05D006923 8.0e-199 697.2 425 85.2
Manes.15G071400 Manihot esculenta HOM05D005555 ORTHO05D006923 8.9e-198 693.7 428 85.0
Ciclev10008353m.g Citrus clementina HOM05D005555 ORTHO05D006923 1.2e-197 693.3 436 85.1
CsaV3_7G021840 Cucumis sativus L. HOM05D005555 ORTHO05D006923 2.6e-197 692.2 433 83.4
Sed0005603 Sechium edule HOM05D005555 ORTHO05D006923 1.1e-195 686.8 438 82.0
Cpa.g.sc12.303 Carica papaya HOM05D005555 ORTHO05D006923 7.0e-195 684.1 438 82.6
Thecc.07G035900 Theobroma cacao HOM05D005555 ORTHO05D006923 9.2e-195 683.7 429 84.4
PGR031G0129 Punica granatum HOM05D005555 ORTHO05D006923 2.7e-194 682.2 434 83.9
THA.LOC104817858 Tarenaya hassleriana HOM05D005555 ORTHO05D006923 1.7e-193 679.5 433 83.8
Gohir.D05G369700 Gossypium hirsutum HOM05D005555 ORTHO05D006923 2.5e-192 675.6 425 83.3
CiPaw.12G130100 Carya illinoinensis HOM05D005555 ORTHO05D006923 1.4e-190 669.8 435 81.8
Actinidia35345 Actinidia chinensis HOM05D005555 ORTHO05D006923 1.8e-190 669.5 435 80.9
Nn1g07133 Nelumbo nucifera HOM05D005555 ORTHO05D006923 5.2e-190 667.9 439 80.6
RcHm_v2.0_Chr2g0139231 Rosa chinensis HOM05D005555 ORTHO05D006923 5.2e-190 667.9 439 80.4
Sp1g37550 Schrenkiella parvula HOM05D005555 ORTHO05D006923 1.2e-189 666.8 428 82.9
A06p02920 Brassica napus HOM05D005555 ORTHO05D006923 1.5e-189 666.4 428 82.2
BraA06t23497Z Brassica rapa HOM05D005555 ORTHO05D006923 1.5e-189 666.4 428 82.2
BcaC08g43248 Brassica carinata HOM05D005555 ORTHO05D006923 2.6e-189 665.6 428 82.0
C06p05960 Brassica napus HOM05D005555 ORTHO05D006923 2.6e-189 665.6 428 82.0
BolC6t35709H Brassica oleracea HOM05D005555 ORTHO05D006923 2.6e-189 665.6 428 82.0
Migut.M01757 Erythranthe guttata HOM05D005555 ORTHO05D006923 5.8e-189 664.5 428 79.9
CSS0038584 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 9.8e-189 663.7 441 81.0
Lj8C169T24 Lonicera japonica HOM05D005555 ORTHO05D006923 1.7e-188 662.9 468 77.1
Lj6g0008930 Lotus japonicus HOM05D005555 ORTHO05D006923 3.2e-187 658.7 439 79.3
Rhsim06G0217300 Rhododendron simsii HOM05D005555 ORTHO05D006923 7.0e-187 657.5 452 77.0
MSTRG.6923 Avicennia marina HOM05D005555 ORTHO05D006923 1.6e-186 656.4 427 80.3
BcaC08g43250 Brassica carinata HOM05D005555 ORTHO05D006923 1.6e-186 656.4 428 80.8
Gorai.009G438500 Gossypium raimondii HOM05D005555 ORTHO05D006923 1.6e-186 656.4 425 81.4
ECA240G0357 Erigeron canadensis HOM05D005555 ORTHO05D006923 2.7e-186 655.6 422 81.3
AL1G58400 Arabidopsis lyrata HOM05D005555 ORTHO05D006923 3.5e-186 655.2 428 81.1
Carub.0001s3974 Capsella rubella HOM05D005555 ORTHO05D006923 1.0e-185 653.7 428 81.1
CiPaw.11G190000 Carya illinoinensis HOM05D005555 ORTHO05D006923 1.7e-185 652.9 435 79.8
CANSAT11G1088 Cannabis sativa HOM05D005555 ORTHO05D006923 3.9e-185 651.7 439 80.0
AT1G50710 Arabidopsis thaliana HOM05D005555 ORTHO05D006923 5.1e-185 651.4 428 80.6
Thhalv10011513m.g Eutrema salsugineum HOM05D005555 ORTHO05D006923 8.6e-185 650.6 428 81.3
Aa31LG10G3630 Aethionema arabicum HOM05D005555 ORTHO05D006923 3.3e-184 648.7 432 79.4
ClCG09G010820 Citrullus lanatus HOM05D005555 ORTHO05D006923 9.5e-184 647.1 482 73.7
Atru.chr2.3417 Acer truncatum HOM05D005555 ORTHO05D006923 2.8e-183 645.6 438 78.8
CARHR040810 Cardamine hirsuta HOM05D005555 ORTHO05D006923 6.2e-183 644.4 428 80.4
Lalb_Chr20g0113831 Lupinus albus HOM05D005555 ORTHO05D006923 1.1e-182 643.7 440 77.3
PSO541G4760 Papaver somniferum HOM05D005555 ORTHO05D006923 3.1e-182 642.1 423 79.2
Aqoxy1G02148 Aquilegia oxysepala HOM05D005555 ORTHO05D006923 6.8e-182 641.0 420 79.8
arahy.Tifrunner.gnm1.ann1.UR7PB1 Arachis hypogaea HOM05D005555 ORTHO05D006923 1.5e-181 639.8 436 79.4
BcaB02g11175 Brassica carinata HOM05D005555 ORTHO05D006923 2.0e-181 639.4 428 80.1
arahy.Tifrunner.gnm1.ann1.P3VUIG Arachis hypogaea HOM05D005555 ORTHO05D006923 2.6e-181 639.0 436 79.1
FAN14G2902 Fragaria x ananassa HOM05D005555 ORTHO05D006923 2.6e-181 639.0 439 77.2
Potri.011G090800 Populus trichocarpa HOM05D005555 ORTHO05D006923 2.6e-181 639.0 435 78.9
Hund15555 Selenicereus undatus HOM05D005555 ORTHO05D006923 4.4e-181 638.3 434 77.9
VMungo0540G1244 Vigna mungo HOM05D005555 ORTHO05D006923 4.4e-181 638.3 440 77.3
Solyc12g005050.2 Solanum lycopersicum HOM05D005555 ORTHO05D006923 2.2e-180 636.0 431 77.0
MELO3C013162.2 Cucumis melo HOM05D005555 ORTHO05D006923 2.9e-180 635.6 444 77.3
MD17G1190200 Malus domestica HOM05D005555 ORTHO05D006923 2.9e-180 635.6 439 78.6
Nitab4.5_0008473g0010 Nicotiana tabacum HOM05D005555 ORTHO05D006923 8.3e-180 634.0 431 77.0
Prupe.3G065100 Prunus persica HOM05D005555 ORTHO05D006923 1.4e-179 633.3 439 78.6
FAN05G3309 Fragaria x ananassa HOM05D005555 ORTHO05D006923 3.2e-179 632.1 438 76.3
SGA_v2.0_scaffold172G39000 Striga asiatica HOM05D005555 ORTHO05D006923 7.1e-179 630.9 431 76.8
TPR.G33802 Trifolium pratense HOM05D005555 ORTHO05D006923 9.2e-179 630.6 444 76.8
arahy.Tifrunner.gnm1.ann1.QY89IE Arachis hypogaea HOM05D005555 ORTHO05D006923 1.2e-178 630.2 436 78.2
Sopen12g001050 Solanum pennellii HOM05D005555 ORTHO05D006923 1.2e-178 630.2 431 76.3
CSS0007038 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 4.6e-178 628.2 444 77.3
Glyma.08G316800 Glycine max HOM05D005555 ORTHO05D006923 1.0e-177 627.1 440 75.7
BraA05t20906Z Brassica rapa HOM05D005555 ORTHO05D006923 5.1e-177 624.8 429 78.8
DCAR_016709 Daucus carota HOM05D005555 ORTHO05D006923 5.1e-177 624.8 424 77.8
EL10Ac2g03146 Beta vulgaris HOM05D005555 ORTHO05D006923 1.1e-176 623.6 457 75.5
Glyma.18G096300 Glycine max HOM05D005555 ORTHO05D006923 1.9e-176 622.9 440 74.8
Medtr3g052180 Medicago truncatula HOM05D005555 ORTHO05D006923 1.9e-176 622.9 433 76.4
PSO675G4173 Papaver somniferum HOM05D005555 ORTHO05D006923 4.3e-176 621.7 423 77.3
Phvul.006G044000 Phaseolus vulgaris HOM05D005555 ORTHO05D006923 4.3e-176 621.7 440 75.5
Nn1g03520 Nelumbo nucifera HOM05D005555 ORTHO05D006923 9.5e-176 620.5 435 75.4
Cc07_g19690 Coffea canephora HOM05D005555 ORTHO05D006923 1.2e-175 620.2 434 76.0
Lsat_1_v5_gn_2_47780 Lactuca sativa HOM05D005555 ORTHO05D006923 2.8e-175 619.0 425 77.6
Psat5g178680 Pisum sativum HOM05D005555 ORTHO05D006923 4.7e-175 618.2 435 75.6
A05p19990 Brassica napus HOM05D005555 ORTHO05D006923 6.2e-175 617.8 429 78.8
Cc05_g13620 Coffea canephora HOM05D005555 ORTHO05D006923 6.2e-175 617.8 434 75.3
PGSC0003DMG400027869 Solanum tuberosum HOM05D005555 ORTHO05D006923 1.1e-174 617.1 431 75.4
Ah.10g032310 Amaranthus hybridus HOM05D005555 ORTHO05D006923 1.5e-173 613.2 439 75.9
Sc03g0008570 Simmondsia chinensis HOM05D005555 ORTHO05D006923 2.0e-173 612.8 386 81.6
Medtr5g049170 Medicago truncatula HOM05D005555 ORTHO05D006923 5.8e-173 611.3 433 75.1
CDE04G3207 Ceratophyllum demersum HOM05D005555 ORTHO05D006923 7.8e-170 600.9 425 72.9
HanXRQChr03g0076481 Helianthus annuus HOM05D005555 ORTHO05D006923 1.3e-169 600.1 404 78.2
FAN02G4472 Fragaria x ananassa HOM05D005555 ORTHO05D006923 5.1e-169 598.2 438 73.3
DCAR_001508 Daucus carota HOM05D005555 ORTHO05D006923 6.6e-169 597.8 422 76.1
CAN.G542.3 Capsicum annuum HOM05D005555 ORTHO05D006923 2.5e-168 595.9 427 73.5
MD09G1208700 Malus domestica HOM05D005555 ORTHO05D006923 1.6e-167 593.2 422 77.0
BcaB07g33510 Brassica carinata HOM05D005555 ORTHO05D006923 1.1e-166 590.5 442 74.0
arahy.Tifrunner.gnm1.ann1.GVQ212 Arachis hypogaea HOM05D005555 ORTHO05D006923 1.2e-165 587.0 471 70.1
MBI05_g12021_MAGBIO Magnolia biondii HOM05D005555 ORTHO05D006923 3.4e-165 585.5 439 74.5
Sabra11G0086200 Salix brachista HOM05D005555 ORTHO05D006923 4.4e-165 585.1 435 74.0
MD03G1200100 Malus domestica HOM05D005555 ORTHO05D006923 2.9e-164 582.4 441 71.9
Nitab4.5_0000981g0050 Nicotiana tabacum HOM05D005555 ORTHO05D006923 8.4e-164 580.9 470 68.9
unitig_744.g24404 Utricularia gibba HOM05D005555 ORTHO05D006923 8.7e-161 570.9 423 71.2
Ca_14731_v3 Cicer arietinum L. HOM05D005555 ORTHO05D006923 3.3e-160 568.9 521 61.8
ATR0752G192 Amborella trichopoda HOM05D005555 ORTHO05D006923 6.2e-159 564.7 427 71.2
Peaxi162Scf00660g00816 Petunia axillaris HOM05D005555 ORTHO05D006923 5.8e-157 558.1 391 75.4
vmacro11723 Vaccinium macrocarpon HOM05D005555 ORTHO05D006923 1.7e-156 556.6 517 62.5
AUR62018195 Chenopodium quinoa HOM05D005555 ORTHO05D006923 1.3e-153 547.0 440 71.4
HanXRQChr05g0134351 Helianthus annuus HOM05D005555 ORTHO05D006923 3.9e-153 545.4 424 71.0
Gohir.D05G369900 Gossypium hirsutum HOM05D005555 ORTHO05D006923 6.7e-153 544.7 424 70.5
Haze_09680 Corylus avellana HOM05D005555 ORTHO05D006923 1.1e-152 543.9 482 66.0
Cfa020338 Carpinus fangiana HOM05D005555 ORTHO05D006923 2.8e-151 539.3 380 78.2
Dinv40759 Davidia involucrata HOM05D005555 ORTHO05D006923 4.0e-150 535.4 388 77.6
Gohir.D05G370300 Gossypium hirsutum HOM05D005555 ORTHO05D006923 4.5e-149 531.9 377 77.2
RcHm_v2.0_Chr5g0039771 Rosa chinensis HOM05D005555 ORTHO05D006923 9.3e-147 524.2 421 67.2
HPP92_010410 Vanilla planifolia HOM05D005555 ORTHO05D006923 1.2e-146 523.9 430 68.1
FvH4_3g22760 Fragaria vesca HOM05D005555 ORTHO05D006923 4.5e-141 505.4 418 66.0
Prupe.4G214200 Prunus persica HOM05D005555 ORTHO05D006923 4.6e-138 495.4 373 71.3
Sed0020027 Sechium edule HOM05D005555 ORTHO05D006923 1.5e-133 480.3 395 68.4
SMO352G0045 Selaginella moellendorffii HOM05D005555 ORTHO05D006923 4.5e-133 478.8 417 62.1
FvH4_6g31880 Fragaria vesca HOM05D005555 ORTHO05D006923 6.1e-130 468.4 326 76.7
Mapoly0032s0110 Marchantia polymorpha HOM05D005555 ORTHO05D006923 2.3e-129 466.5 441 58.0
FAN16G3656 Fragaria x ananassa HOM05D005555 ORTHO05D006923 3.3e-128 462.6 399 64.2
Zm00001eb230170 Zea mays HOM05D005555 ORTHO05D006923 1.8e-126 456.8 423 61.9
arahy.Tifrunner.gnm1.ann1.92YVPD Arachis hypogaea HOM05D005555 ORTHO05D006923 1.3e-124 450.7 426 59.6
Pp3c17_11280 Physcomitrium patens HOM05D005555 ORTHO05D006923 2.9e-124 449.5 419 59.4
TPR.G5778 Trifolium pratense HOM05D005555 ORTHO05D006923 8.5e-124 448.0 337 72.1
AUR62038682 Chenopodium quinoa HOM05D005555 ORTHO05D006923 2.2e-119 433.3 438 59.6
arahy.Tifrunner.gnm1.ann1.21WID0 Arachis hypogaea HOM05D005555 ORTHO05D006923 9.4e-115 417.9 431 54.8
FAN25G0297 Fragaria x ananassa HOM05D005555 ORTHO05D006923 1.2e-109 401.0 355 63.1
Medtr5g049150 Medicago truncatula HOM05D005555 ORTHO05D006923 9.5e-75 285.0 220 69.5
CBR_g19746 Chara braunii HOM05D005555 ORTHO05D006923 8.1e-66 255.4 381 41.5
CBR_g6714 Chara braunii HOM05D005555 ORTHO05D006923 3.0e-60 236.9 422 36.5
Os02g0119100 Oryza sativa ssp. japonica HOM05D005555 ORTHO05D006923 4.5e-40 169.9 204 52.0
TPR.G5733 Trifolium pratense HOM05D005555 ORTHO05D006923 3.5e-29 133.7 84 79.8
Hma1.2p1_0206F.1_g087650 Hydrangea macrophylla HOM05D005555 ORTHO05D006923 6.3e-18 96.3 46 95.7
Hma1.2p1_0545F.1_g176020 Hydrangea macrophylla HOM05D005555 ORTHO05D006923 6.3e-18 96.3 46 95.7
Lsat_1_v5_gn_9_94361 Lactuca sativa HOM05D005555 ORTHO05D006923 1.1e-17 95.5 55 83.6
Actinidia13832 Actinidia chinensis HOM05D005555 ORTHO05D006923 6.9e-09 66.2 53 69.8


User provided reference genes

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