Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03426 Eucalyptus grandis HOM05D007184 ORTHO05D008987 9.3e-57 223.4 119 100.0
PGR031G2970 Punica granatum HOM05D007184 ORTHO05D008987 2.5e-46 188.7 118 84.7
Nn1g03662 Nelumbo nucifera HOM05D007184 ORTHO05D008987 9.6e-46 186.8 118 82.2
Gohir.D13G146000 Gossypium hirsutum HOM05D007184 ORTHO05D008987 6.2e-45 184.1 118 81.4
Thecc.07G052800 Theobroma cacao HOM05D007184 ORTHO05D008987 6.2e-45 184.1 118 82.2
TAR624G0273 Trochodendron aralioides HOM05D007184 ORTHO05D008987 8.1e-45 183.7 118 80.5
Gohir.A13G141300 Gossypium hirsutum HOM05D007184 ORTHO05D008987 1.1e-44 183.3 118 81.4
Gorai.013G163800 Gossypium raimondii HOM05D007184 ORTHO05D008987 1.1e-44 183.3 118 81.4
COL.COLO4_09571 Corchorus olitorius HOM05D007184 ORTHO05D008987 1.4e-44 183.0 118 81.4
CiPaw.11G183700 Carya illinoinensis HOM05D007184 ORTHO05D008987 5.3e-44 181.0 118 79.7
BcaB07g33556 Brassica carinata HOM05D007184 ORTHO05D008987 1.5e-43 179.5 118 78.8
BcaC08g43280 Brassica carinata HOM05D007184 ORTHO05D008987 1.5e-43 179.5 118 78.8
A06p02680 Brassica napus HOM05D007184 ORTHO05D008987 1.5e-43 179.5 118 78.8
C06p06300 Brassica napus HOM05D007184 ORTHO05D008987 1.5e-43 179.5 118 78.8
BolC6t35739H Brassica oleracea HOM05D007184 ORTHO05D008987 1.5e-43 179.5 118 78.8
Duzib268G1070 Durio zibethinus HOM05D007184 ORTHO05D008987 2.0e-43 179.1 118 80.5
Hma1.2p1_1869F.1_g306030 Hydrangea macrophylla HOM05D007184 ORTHO05D008987 2.0e-43 179.1 118 79.7
Cpa.g.sc97.69 Carica papaya HOM05D007184 ORTHO05D008987 3.4e-43 178.3 118 80.5
BraA06t23477Z Brassica rapa HOM05D007184 ORTHO05D008987 4.5e-43 177.9 118 78.0
CANSAT11G2419 Cannabis sativa HOM05D007184 ORTHO05D008987 4.5e-43 177.9 118 78.8
Cfa020415 Carpinus fangiana HOM05D007184 ORTHO05D008987 4.5e-43 177.9 118 78.0
Thhalv10011779m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 4.5e-43 177.9 118 78.0
CARHR041120 Cardamine hirsuta HOM05D007184 ORTHO05D008987 5.8e-43 177.6 118 78.8
THA.LOC104817896 Tarenaya hassleriana HOM05D007184 ORTHO05D008987 9.9e-43 176.8 119 77.3
Manes.03G122800 Manihot esculenta HOM05D007184 ORTHO05D008987 1.3e-42 176.4 118 78.8
Sp1g37830 Schrenkiella parvula HOM05D007184 ORTHO05D008987 3.8e-42 174.9 118 77.1
AL1G58900 Arabidopsis lyrata HOM05D007184 ORTHO05D008987 4.9e-42 174.5 118 76.3
AT1G51100 Arabidopsis thaliana HOM05D007184 ORTHO05D008987 4.9e-42 174.5 118 76.3
CSS0032425 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 4.9e-42 174.5 118 78.8
CSS0036378 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 4.9e-42 174.5 118 78.8
CDE05G0960 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 4.9e-42 174.5 118 78.0
Lj3g0025244 Lotus japonicus HOM05D007184 ORTHO05D008987 1.4e-41 172.9 118 78.0
MELO3C016627.2 Cucumis melo HOM05D007184 ORTHO05D008987 1.9e-41 172.6 118 77.1
CsaV3_3G005480 Cucumis sativus L. HOM05D007184 ORTHO05D008987 1.9e-41 172.6 118 77.1
QL08p013337 Quercus lobata HOM05D007184 ORTHO05D008987 2.4e-41 172.2 117 76.9
ClCG10G005800 Citrullus lanatus HOM05D007184 ORTHO05D008987 3.2e-41 171.8 118 76.3
Carub.0001s4001 Capsella rubella HOM05D007184 ORTHO05D008987 4.2e-41 171.4 118 76.3
EL10Ac4g07971 Beta vulgaris HOM05D007184 ORTHO05D008987 5.4e-41 171.0 118 74.6
Cc05_g13240 Coffea canephora HOM05D007184 ORTHO05D008987 7.1e-41 170.6 119 74.8
QL08p013467 Quercus lobata HOM05D007184 ORTHO05D008987 7.1e-41 170.6 117 76.1
FvH4_3g21830 Fragaria vesca HOM05D007184 ORTHO05D008987 9.3e-41 170.2 118 75.4
FAN11G2616 Fragaria x ananassa HOM05D007184 ORTHO05D008987 9.3e-41 170.2 118 75.4
FAN21G0378 Fragaria x ananassa HOM05D007184 ORTHO05D008987 9.3e-41 170.2 118 75.4
FAN25G3727 Fragaria x ananassa HOM05D007184 ORTHO05D008987 9.3e-41 170.2 118 75.4
MBI12_g14496_MAGBIO Magnolia biondii HOM05D007184 ORTHO05D008987 9.3e-41 170.2 119 79.0
Lalb_Chr14g0366141 Lupinus albus HOM05D007184 ORTHO05D008987 1.2e-40 169.9 118 75.4
RcHm_v2.0_Chr4g0410121 Rosa chinensis HOM05D007184 ORTHO05D008987 2.1e-40 169.1 118 74.6
AUR62020554 Chenopodium quinoa HOM05D007184 ORTHO05D008987 2.7e-40 168.7 118 74.6
Ciclev10009433m.g Citrus clementina HOM05D007184 ORTHO05D008987 2.7e-40 168.7 118 75.4
AUR62015645 Chenopodium quinoa HOM05D007184 ORTHO05D008987 4.6e-40 167.9 118 74.6
RcHm_v2.0_Chr5g0037571 Rosa chinensis HOM05D007184 ORTHO05D008987 4.6e-40 167.9 118 74.6
Nitab4.5_0009192g0030 Nicotiana tabacum HOM05D007184 ORTHO05D008987 6.0e-40 167.5 118 77.1
Sopen07g032240 Solanum pennellii HOM05D007184 ORTHO05D008987 6.0e-40 167.5 118 76.3
PGSC0003DMG400019260 Solanum tuberosum HOM05D007184 ORTHO05D008987 6.0e-40 167.5 118 76.3
ATR0073G001 Amborella trichopoda HOM05D007184 ORTHO05D008987 1.0e-39 166.8 118 72.9
Nitab4.5_0000397g0060 Nicotiana tabacum HOM05D007184 ORTHO05D008987 1.0e-39 166.8 118 76.3
Prupe.4G202500 Prunus persica HOM05D007184 ORTHO05D008987 1.0e-39 166.8 118 73.7
Sabra11G0119700 Salix brachista HOM05D007184 ORTHO05D008987 1.0e-39 166.8 118 76.3
arahy.Tifrunner.gnm1.ann1.538Z4G Arachis hypogaea HOM05D007184 ORTHO05D008987 1.3e-39 166.4 118 75.4
Glyma.12G214300 Glycine max HOM05D007184 ORTHO05D008987 1.3e-39 166.4 118 74.6
Peaxi162Scf01086g00015 Petunia axillaris HOM05D007184 ORTHO05D008987 1.3e-39 166.4 118 77.1
VMungo1080G0323 Vigna mungo HOM05D007184 ORTHO05D008987 2.3e-39 165.6 118 74.6
Medtr2g082930 Medicago truncatula HOM05D007184 ORTHO05D008987 3.9e-39 164.9 118 72.9
Solyc07g064100.1 Solanum lycopersicum HOM05D007184 ORTHO05D008987 3.9e-39 164.9 118 74.6
TPR.G36807 Trifolium pratense HOM05D007184 ORTHO05D008987 3.9e-39 164.9 118 72.9
Migut.H01857 Erythranthe guttata HOM05D007184 ORTHO05D008987 8.7e-39 163.7 119 72.3
Lj1P863T33 Lonicera japonica HOM05D007184 ORTHO05D008987 8.7e-39 163.7 118 75.4
PSO675G5359 Papaver somniferum HOM05D007184 ORTHO05D008987 8.7e-39 163.7 119 75.6
Phvul.005G091600 Phaseolus vulgaris HOM05D007184 ORTHO05D008987 8.7e-39 163.7 118 74.6
Aqoxy4G02072 Aquilegia oxysepala HOM05D007184 ORTHO05D008987 1.1e-38 163.3 109 77.1
Glyma.13G287300 Glycine max HOM05D007184 ORTHO05D008987 1.1e-38 163.3 118 73.7
MD03G1211500 Malus domestica HOM05D007184 ORTHO05D008987 1.1e-38 163.3 118 72.9
PSO541G2827 Papaver somniferum HOM05D007184 ORTHO05D008987 1.5e-38 162.9 119 74.8
HanXRQChr05g0159221 Helianthus annuus HOM05D007184 ORTHO05D008987 3.3e-38 161.8 118 72.0
Oeu062614.1 Olea europaea HOM05D007184 ORTHO05D008987 3.3e-38 161.8 118 71.2
Potri.011G132900 Populus trichocarpa HOM05D007184 ORTHO05D008987 3.3e-38 161.8 118 74.6
Atru.BG.150.p Acer truncatum HOM05D007184 ORTHO05D008987 7.4e-38 160.6 116 75.0
Ca_01753_v3 Cicer arietinum L. HOM05D007184 ORTHO05D008987 7.4e-38 160.6 119 73.1
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 7.4e-38 160.6 118 72.0
TWI38G1172 Tripterygium wilfordii HOM05D007184 ORTHO05D008987 7.4e-38 160.6 118 72.0
Psat5g251800 Pisum sativum HOM05D007184 ORTHO05D008987 9.6e-38 160.2 119 72.3
unitig_52.g17357 Utricularia gibba HOM05D007184 ORTHO05D008987 1.6e-37 159.5 118 72.0
GSVIVG01014606001 Vitis vinifera HOM05D007184 ORTHO05D008987 1.6e-37 159.5 105 79.0
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 3.7e-37 158.3 118 73.7
QL08p013286 Quercus lobata HOM05D007184 ORTHO05D008987 6.2e-37 157.5 116 72.4
ClCG03G004100 Citrullus lanatus HOM05D007184 ORTHO05D008987 1.2e-35 153.3 118 70.3
SalBow7G0016 Salvia bowleyana HOM05D007184 ORTHO05D008987 2.6e-35 152.1 118 68.6
CDE11G0483 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 1.7e-34 149.4 106 74.5
Sed0004555 Sechium edule HOM05D007184 ORTHO05D008987 2.9e-34 148.7 119 68.1
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 1.4e-33 146.4 106 71.7
Haze_09610 Corylus avellana HOM05D007184 ORTHO05D008987 2.5e-33 145.6 110 69.1
DCAR_010017 Daucus carota HOM05D007184 ORTHO05D008987 4.2e-33 144.8 105 73.3
Os01g0676200 Oryza sativa ssp. japonica HOM05D007184 ORTHO05D008987 5.5e-33 144.4 119 66.4
Zm00001eb156870 Zea mays HOM05D007184 ORTHO05D008987 3.5e-32 141.7 119 65.5
QL08p013784 Quercus lobata HOM05D007184 ORTHO05D008987 5.1e-31 137.9 115 68.7
QL08p060543 Quercus lobata HOM05D000807 ORTHO05D008987 6.5e-26 120.9 82 79.3
QL08p060183 Quercus lobata HOM05D000807 ORTHO05D008987 4.2e-25 118.2 82 78.0
SEGI_35792 Sequoiadendron giganteum HOM05D007184 ORTHO05D008987 9.7e-22 107.1 119 47.1
Nn1g08505 Nelumbo nucifera HOM05D007184 ORTHO05D008987 4.8e-21 104.8 87 64.4
EL10Ac1g02068 Beta vulgaris HOM05D007184 ORTHO05D008987 7.7e-19 97.4 71 67.6
Potri.001G417350 Populus trichocarpa HOM05D007184 ORTHO05D008987 1.1e-17 93.6 73 65.8
Sc03g0008930 Simmondsia chinensis HOM05D007184 ORTHO05D008987 5.5e-17 91.3 102 57.8
Lju3590C0T1 Lonicera japonica HOM05D007184 ORTHO05D008987 8.8e-15 84.0 58 79.3
Pp3c11_19690 Physcomitrium patens HOM05D007184 ORTHO05D008987 8.2e-13 77.4 112 39.3
Mapoly0032s0044 Marchantia polymorpha HOM05D007184 ORTHO05D008987 1.4e-09 66.6 106 42.5
CBR_g19283 Chara braunii HOM05D007184 ORTHO05D008987 1.9e-09 66.2 103 35.0
FvH4_7g08050 Fragaria vesca HOM05D007184 ORTHO05D008987 2.5e-09 65.9 46 71.7
BcaB07g33555 Brassica carinata HOM05D007184 ORTHO05D008987 3.2e-09 65.5 43 67.4
FAN01G2498 Fragaria x ananassa HOM05D007184 ORTHO05D008987 4.2e-09 65.1 44 75.0
Thhalv10012149m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 6.1e-08 61.2 38 68.4


User provided reference genes

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