Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 5.1e-123 444.5 236 100.0
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 1.2e-79 300.4 220 74.1
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 2.0e-79 299.7 215 74.0
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 2.6e-79 299.3 215 74.0
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 2.9e-78 295.8 214 69.6
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 5.0e-78 295.0 214 72.9
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 5.0e-78 295.0 214 70.1
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.0e-75 287.3 214 68.7
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 5.1e-75 285.0 217 67.7
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 1.5e-74 283.5 216 72.7
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 4.3e-74 282.0 219 70.3
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 8.2e-73 277.7 218 68.8
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 8.2e-73 277.7 215 67.0
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 1.8e-72 276.6 214 70.1
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 2.4e-72 276.2 219 68.0
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 9.1e-72 274.2 218 68.3
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 8.5e-70 267.7 215 64.2
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 1.2e-68 263.8 235 63.0
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 3.6e-68 262.3 215 64.7
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 3.6e-68 262.3 246 59.8
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 1.4e-67 260.4 217 65.0
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 3.9e-67 258.8 247 59.1
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 5.1e-67 258.5 215 65.1
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 6.7e-67 258.1 215 64.2
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.5e-66 256.9 220 65.0
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 2.6e-66 256.1 208 61.5
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 2.6e-66 256.1 188 70.7
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 3.3e-66 255.8 208 62.5
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 5.7e-66 255.0 188 67.6
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 5.7e-66 255.0 215 62.8
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 5.7e-66 255.0 213 60.6
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 9.7e-66 254.2 215 65.1
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 9.7e-66 254.2 221 64.7
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 1.3e-65 253.8 211 66.4
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 1.3e-65 253.8 218 65.1
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 2.2e-65 253.1 222 64.0
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 2.8e-65 252.7 219 63.9
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 2.8e-65 252.7 216 63.9
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 3.7e-65 252.3 222 63.5
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 4.8e-65 251.9 169 72.2
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 6.3e-65 251.5 223 61.4
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 6.3e-65 251.5 223 61.4
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 6.3e-65 251.5 217 64.5
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 8.2e-65 251.1 221 64.3
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 8.2e-65 251.1 211 62.6
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 1.4e-64 250.4 247 59.1
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 1.8e-64 250.0 219 62.1
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 2.4e-64 249.6 194 68.6
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 4.1e-64 248.8 208 60.1
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 7.0e-64 248.1 223 61.9
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 7.0e-64 248.1 223 61.9
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 7.0e-64 248.1 220 60.0
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 1.5e-63 246.9 182 67.6
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 2.6e-63 246.1 223 61.4
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 3.5e-63 245.7 188 63.8
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 4.5e-63 245.4 184 65.2
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 4.5e-63 245.4 215 64.2
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 5.9e-63 245.0 243 58.0
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 1.3e-62 243.8 244 58.2
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 2.2e-62 243.0 224 62.5
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 3.8e-62 242.3 221 61.1
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 6.5e-62 241.5 182 65.9
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 8.5e-62 241.1 217 62.2
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.5e-61 240.4 221 62.4
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 1.9e-61 240.0 222 61.3
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 1.9e-61 240.0 211 63.0
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 2.5e-61 239.6 208 60.6
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 4.2e-61 238.8 215 60.5
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 1.2e-60 237.3 148 75.7
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 2.7e-60 236.1 203 60.6
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 4.7e-60 235.3 159 73.6
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 3.0e-59 232.6 221 61.5
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 3.0e-59 232.6 218 61.0
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 6.7e-59 231.5 160 73.1
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 3.3e-58 229.2 180 66.7
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 4.4e-58 228.8 190 62.6
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 9.7e-58 227.6 208 59.1
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 3.7e-57 225.7 196 63.8
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 1.1e-56 224.2 224 55.8
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 6.1e-52 208.4 238 47.1
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 2.6e-50 203.0 167 67.7
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 3.4e-50 202.6 250 49.6
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 4.4e-50 202.2 125 76.8
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 9.8e-50 201.1 186 54.3
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 8.3e-49 198.0 196 55.1
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 8.3e-49 198.0 208 55.8
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 1.8e-48 196.8 210 53.3
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 2.7e-47 193.0 211 54.0
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 3.5e-47 192.6 323 42.1
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 4.2e-45 185.7 142 59.9
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 3.0e-43 179.5 209 50.7
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.5e-42 177.2 131 72.5
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 3.7e-41 172.6 134 64.2
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 4.9e-41 172.2 242 44.6
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 1.8e-40 170.2 134 62.7
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 7.0e-40 168.3 189 51.9
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 7.0e-40 168.3 145 61.4
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 1.2e-39 167.5 153 56.9
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 1.0e-38 164.5 209 47.4
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 1.0e-38 164.5 209 47.4
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 1.6e-36 157.1 132 61.4
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 4.7e-36 155.6 109 67.9
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 2.6e-34 149.8 161 46.0
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 2.6e-34 149.8 89 75.3
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 5.0e-30 135.6 87 71.3
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 3.3e-29 132.9 221 36.7
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 2.0e-23 113.6 163 41.1
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 2.7e-23 113.2 88 64.8
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 1.0e-22 111.3 93 65.6
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 1.7e-22 110.5 150 41.3
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 6.6e-14 82.0 201 37.3
MELO3C030131.2 Cucumis melo HOM05D004229 ORTHO05D025211 1.0e-06 58.2 39 66.7
FAN25G1192 Fragaria x ananassa HOM05D000461 ORTHO05D009042 3.0e-06 56.6 54 55.6


User provided reference genes

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